Oncorhynchus masou masou (cherry salmon): 135541867
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Entry
135541867 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135541867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135541867
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135541867
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135541867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
zf-RING_4
zf-RING_5
HTH_DNAJC9
Motif
Other DBs
NCBI-GeneID:
135541867
NCBI-ProteinID:
XP_064824388
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All DBs
Position
6:complement(29939818..29948004)
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AA seq
838 aa
AA seq
DB search
MAENDVDMMEVCDNPDPALAASRAPHYPQWKYSSPHGRGDRTYSSGTSGEPVIVTQPHSC
PSSHTQRTVLTDKQKDLYLTDDESEEGLDTPPQNLNQAKVEERKQPSASPDEATVYVTVQ
WPRKDLPPKWESTLEKTLQSWLNKDFGDKTTDCTLKGLYYNGSWAEVKITPSTDLKVLLN
QRATQMTFKDQAKTTATVQFHKTAPSTSWNQSDFKPSSMDGSPPTSHPPQDVKLPMTVNT
IIDLSGIPHEAQVALQTRFSQYRTYHSLTFTGNFEEVEKFQREVNKVIKEAEARPAGDWN
GLAATPSMTHKVMNTHEAPGQTEMSFPVPLTLFGYINQVYQKEMEDIEKRNGVKINADVK
VSIKEDSEKTGRDCLLPEAYQELIDLFQKCAGDFHSISAHLPHMNLEDLQNTLKNIPNEE
SRLLLNVSANSCNVFGPKQSMVAVRKAFGVCHSSTVKTFGMDHSSTDEAFGSGRRSTEIP
QKIVLDSKDPLVSSGLSMDPAHWELIQKIFDEQIKAIQNKFGVVFMNNPSQGKVRVTTRP
IKSQHTASLESHAIRALMHLYQKVATSTMSCYLLDTTQAGTVGDMLEKIRSRHQCVGAGE
KYGPWRLIGLPEHLGPAVKELEEKLGGPVFKKEDKQRIVYPEDFNTGAAEVGAAGEATCP
ICMDIFTNKEKLSCTHEFCKECLRRSVESMGPSCPVCKDVYGKVEGDQPDGTMTHTISYT
NLPGFTQCDTIVVNYDIPGGKQTKKHPNPGKHFYGTQRRAYLPNNIEGNEVLKLLKKAFN
QRLIFTVGISRTTGAENVVTWNDIHHKTNIGGGAQNFGYPDHDYLSRVKDELKAKGIK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgacgttgacatgatggaagtgtgtgataatcctgacccagccttggct
gccagtagagcaccacactatccacaatggaagtattcaagcccccatgggagaggtgat
cggacctattcttcaggaacaagtggggagccagtgatagtaacacagccacattcatgt
cctagcagtcacacccaaaggactgttttgactgataaacaaaaggacctgtatttgaca
gatgatgaatctgaagaaggactcgatacaccaccccagaatctgaatcaagctaaggtt
gaagagagaaagcagccatcagcatctccagatgaggctacagtctacgtcactgtgcag
tggcctaggaaagaccttccaccaaaatgggaatctacactagagaaaactctccagtca
tggctcaataaagactttggtgataagactacagattgtaccttgaaaggtctttattac
aatgggtcatgggctgaggtcaagataactccctcaacagatctaaaagtacttctgaat
cagagggcgacacagatgaccttcaaagaccaggccaagacaaccgctaccgtgcagttt
cacaagactgcaccatctacatcctggaaccaatcagactttaaacccagctcaatggat
ggctctcctccaacatcacaccctccacaggatgtcaaactcccaatgactgtaaatact
atcattgatctcagtggcatcccacatgaagcacaggttgcccttcagaccaggttcagt
cagtaccgcacttatcactcactgacctttactgggaactttgaggaagtggagaagttc
caaagagaggtgaacaaggtcatcaaggaagctgaggctaggccagcaggtgattggaat
ggtttagcagcgacaccaagtatgactcacaaggtaatgaacacccatgaagcccctgga
caaacagaaatgagctttccagtcccactgaccctctttgggtacattaaccaggtctac
cagaaggagatggaggacatagagaaaagaaatggagtcaaaatcaatgcagatgtgaag
gtgtccatcaaagaagattcagagaaaacaggcagagattgtctgctgcccgaagcctac
caggagttaattgaccttttccagaagtgtgcaggtgattttcacagcatctccgcacat
ctgccacacatgaatctagaagacctccagaatacactgaagaacatcccgaatgaggag
tccaggctgttgctgaatgtgtccgccaacagttgcaatgtgtttgggccgaagcagagc
atggtagcagtcaggaaggcttttggggtgtgccacagctccacagtgaagaccttcgga
atggatcacagctccacagatgaggcctttggatctggaaggagatctacagagattcca
cagaagattgtgcttgacagcaaagacccactggtgtcaagtgggctgtccatggaccca
gcccactgggagctgattcaaaaaatatttgatgaacaaataaaagcaatccaaaataaa
tttggagtagttttcatgaataatccctctcaggggaaggtcagagtgacaaccagacct
atcaagtcccaacacactgcctctctggaaagccacgccatcagagctctcatgcacctc
taccagaaggttgccacgtcaacaatgagctgctatctgctagacactacccaggcaggg
accgtgggggatatgctggagaagatccgctctcgacaccaatgtgttggggcaggagaa
aaatacggtccctggaggctgattggcctaccggagcatttaggccctgctgtcaaagag
cttgaagagaagctgggtgggcctgtgtttaaaaaggaagacaagcagaggattgtgtat
ccggaagacttcaacactggagcagctgaggtgggagcagctggggaagcgacatgcccc
atatgcatggatatatttaccaacaaggagaagttgtcgtgcacccatgagttttgtaaa
gagtgtctgaggcggtcagtggaatccatgggccccagctgtcctgtgtgtaaggatgtg
tacgggaaggtggagggagaccagcctgatggaacaatgacacacactatttcttacacc
aacctacctggattcactcaatgtgacacaatagttgtcaactatgatatcccaggtgga
aaacagacgaagaaacatcccaaccctggaaagcacttctatgggacccaaagaagggct
tatctacccaataacattgaggggaatgaggtcctgaagctgctaaagaaagcatttaat
cagaggctgattttcacagttgggatctccagaaccactggggcagaaaacgtagtgacc
tggaatgacattcaccacaaaaccaacatcggaggaggggcacaaaatttcggctatcct
gaccatgactacctgagcagagtgaaggatgagctgaaagccaaaggcatcaaatga
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