Oncorhynchus masou masou (cherry salmon): 135541869
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Entry
135541869 CDS
T10723
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135541869
04091 Lectins [BR:
omm04091
]
135541869
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135541869
Lectins [BR:
omm04091
]
C-Type lectins
Others
135541869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
GPS
Motif
Other DBs
NCBI-GeneID:
135541869
NCBI-ProteinID:
XP_064824438
LinkDB
All DBs
Position
1:67130789..67154652
Genome browser
AA seq
2377 aa
AA seq
DB search
MDSTNLSVLLLNAFLLSLSCAEDEIAPLSCPEYQESFDGSCYEFVGPPRSRSFLSAQGWC
ERGGGHLAFILNDETQQFLQKHLQTEQDWWLGLAPASPNLTLDSAAAEGPLSWLDGSDVS
YSNWVNDPDPGAGCGHILRSSGFQWEATSNCSQELHFICQFESGRSIACAAHNATLQCGS
GQVIEIDDSFYGRKTVHYCRTSPTSSATSTQEECSWIDVVHSVTGDCHGLQACQATADVA
SFGEPCPGLGSYLSVEYNCKDGLHLLMSKLAAVFDNVSITVKWLLHPFQGNLTCTLSAGD
GHNIDPYSPEELESSVVHKYTRPGVFIVGVECTTSEWHVTAQKAITIQEPIGEFGVIKCY
SMNQSTDGANCKALYGSPLQIQVEVEAGTNVTYKVHRGEMLVANSSAVRGIVPHNITVGP
EVEQQLGSGCHQMTLHASNGVSVLGVSTELQVCLLEPVEGLLGSVMAEEGECPDSDLYVS
VSLDRGTPVQLLFQVSGANDSMTETRGMQNSSMQVYNISTTIQGALQVKVRAWNVFSHMD
VDVGNTTAGDLKHCYKKAKRRPLLHRIDGGNEYMVTSDNLKNAQSRSLNLNVIAYGKTTS
GAVKYTIQIPGVATLAPVATNIPPATLPAATTILPAVTTRPAATTIPVATIPLVATTLLA
ATTIAATTTVSVTVPERTAPTTITSLPSCVISPPSGTVLDAFNITCATTPCSTGKCQYCF
KTDKDKHLRCSYGNEVKSIFLPLGNKSYNYSLSVVVTLTNGDRKTNATITTEVWPANSSS
SVENLQSVVENTVAQLQQQGLLTGETLGQMFKSVSDILNKGSSEDQKGAREELREQMLST
MTAVLKNVPNNTPQEVQLTARAVAGITKRREEVNAAAQLEASSLVADLSSSLLYMNVSEH
GGEEMVQAATPIVEAASNILGVSSNRKVSKTLLNSMDNVQSALLNGKKVGQEPAIIKSPE
ISVYANRMSPNSIQMQSINIPDSSSASFSFPPLGADVLSPEEPVDVRMLSFEKNPYSWSE
GGNISGAMGSVTLTRQDGSAISVENLSEEIEILLPRLEGGQVNSTILELGNYSTLMIDVP
SPDITLVLKMEPSEDIPFVLLLGYKDYPKDKQYVAKTQMPHQGNSQERYTWVLGPNDLTG
KVGVHYLVVRPIVEAGVKSVNATVTVTSIAAQCKYWNETLSTWSEDGCRVGPLTTPLVTQ
CLCNHLTFFGSSFFIMPNLVDVSRTAELFATFSDNPVVVCFVGAIFIAYLLVVVWARRKD
IKDIAKVKVTLLEDNDPLAEYRYMLNISTGHRRGASTSSQVTVTLLGTEGESEPHHLADP
DKPVFERGAVDTFLLTTPFSLGELQSIRLWHDNSGGHPAWYINKVTVQDLETGQKWHFLC
NSWLAIDMGECILDKVFPVASDIDLKKFSNLFFMKTAKDFRDGHIWFSVISRPPTSTFTC
VQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGVQSSIIMFPINL
LIVSIFRNTRPRETKPGKPKAEVSKQGKTGRVTPSQPPSPQRERELTPDTVIKDIKKIAQ
SLSKAMKSPIPHLELEMKPGQQTDINSLLSLVEDIIRQQNRASGEFYTDASKKEGSLILS
LGVANLQETSLCGSPEKTGDGRQKRSNNSQYLYRQLRHVEKELSLLGPSRFPNPDSYCRA
VQQVQGMRGLLESHLSSSSLGGDQLSQSPSPAESSEGDSSSKKQGGLPWWFVFIGWILVL
ATSGVSGYFTMMYGLTYGKDRSISWLISMVVSFFESLFITQPLKVLGFAAFFALVLKKVD
QEEYGDAKFEGELRNPDDPDVVRAVRRDSTCSFYQPPPPTDIERMRSNMIKEQKVFALIK
EILTYMGFMWMLLLVAYGQRDPNAYFLTQHIRQSFSQGISDSMSHKDVFTWANTSLLSNL
FGEYPGFITDGNSKLVGNARLRQVRVQKNSCRIARSMRQAIPDCHAPYSWEVEDMGSYGP
GWNRSASENASKTMHSPWQYQTQARLRAQPTWGSVVLYRGGGFVVDLGPESQNASSTLQY
LFDNTWLDMFTRAVFVEFTVYNANVNLFCTVTLMLETTAVGAFQFRSELQSVRLYQSTGG
LHIFVMASEVIYFLFILYYMYVQGKLMKLQKWAYFKTKWNLLELAIILLSWSALSVFIKR
TLLGNRDMEYYHNHKDQFASFHETATADAVLGYLIAFLVLLATVKLWHLLRLNPKLHMIT
ATLQRAWTDISGFLVVITIMFLAYSIASYLMYGWKLYSYRTLLDAALTMVSLQLGIFNYD
EVLDYNPVLGAFLIGSCIIFMTFVVLNLFISVILVAFTQEQIHHKPSEEEEIVDLMLMKL
CSLFGIKMKKEKEDSDSPKENGMTASATNKGFSTISS
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atggacagcactaatctctctgtattgctcttgaatgctttcctcttaagcctgtcttgt
gctgaggatgagatagcacctctatcctgcccagagtaccaagagagctttgatggctcc
tgttatgagtttgtgggtccacctcgttcgcgttccttcctcagtgcacagggttggtgt
gagcgaggtggtggacacctggccttcattttaaatgacgaaacccagcagttcctacag
aagcacctgcagacggagcaggactggtggctgggtctggcacctgcctccccaaaccta
acactggactctgctgctgctgagggtcctctctcctggcttgatggctctgatgtcagc
tactctaactgggtgaacgaccctgatccaggggctggctgtggtcacatactgaggagc
tcagggtttcagtgggaggcaacaagcaactgtagccaggagctgcacttcatctgccaa
tttgaatctgggcgctccatagcttgtgctgcccacaatgcaacactacagtgtggttct
ggtcaggtgatagagattgatgacagcttctatggtcgtaagacggttcactactgccgg
acgagtcccacttcttcagccacctccacacaggaggagtgtagctggatagatgttgta
cattcagtgacaggagactgccatgggctgcaggcgtgccaagccacagcagatgtggcc
tcttttggtgaaccatgcccagggcttggaagctacctgtctgtggaatacaactgcaaa
gatggtctccacttattaatgagcaagttggctgccgtctttgacaatgtctccataaca
gtgaagtggcttctccatcccttccagggcaacctgacctgcactctaagtgctggagat
gggcacaacatcgatccttatagtccagaagagttggagagcagtgtggttcataaatac
acccgtccgggtgtcttcatagttggggtggagtgtaccaccagtgagtggcatgtgaca
gctcagaaagccatcaccattcaggagcccatcggggagtttggcgtcattaagtgctat
agcatgaaccaatcaacagatggtgcaaactgcaaggccctgtacggaagcccccttcaa
atccaggtagaagtagaagctggtacgaatgtgacctacaaagtccaccgtggtgagatg
ttggtggccaattcatcagcagtcagaggaatcgtcccccacaacatcacagtgggacca
gaggtggagcaacaactgggctctggctgccaccagatgaccctgcatgcctctaacggg
gtctcggtcttgggcgtgtccactgagctgcaggtgtgtctgctggagcctgtggagggc
ctgctgggatcagtgatggctgaggagggagagtgtccagactcagacctctacgttagt
gtctccctggaccggggaaccccggtgcagcttctcttccaggtgtctggagccaacgac
agcatgaccgagaccagaggcatgcaaaacagcagcatgcaggtttacaatatctcaacc
actatccaaggagctttgcaagtgaaagtcagggcctggaatgtcttctcacacatggac
gtggatgtggggaacacaacagcaggagacctcaaacactgctacaaaaaagcaaagcga
agaccactgctacacagaatagatggtggcaatgaatacatggtgacaagtgacaatctg
aaaaatgcccagtccagatctctgaatctcaatgtgatagcgtatggtaagacgacatct
ggcgctgtcaagtacaccattcagataccaggtgttgcaacacttgcacctgttgccact
aacataccgcctgctaccttaccggctgctaccaccatcctaccggctgttactacccgt
ccagctgctactacaatacctgttgctaccatcccactggtagctactaccctactggct
gctaccaccatagcggcaactactactgtatctgtaactgtacctgaaagaacagcccca
actaccatcaccagcctcccttcctgtgtaatttcccctccgtcaggcacagttctagat
gctttcaatatcacatgtgcaacaaccccctgctccacaggcaaatgccaatattgtttc
aaaactgacaaagataaacatttgcgctgcagttatggaaatgaagtaaagtcaatcttc
ctacctctcgggaacaaaagttacaactacagtctgtctgtggtggttactctaacaaat
ggggatagaaaaaccaatgccacgatcactactgaggtgtggccagccaactccagttcc
tcagtggagaatctgcagtctgtggttgagaacactgtcgctcagctacagcagcagggg
ttgctcactggggagaccctgggacagatgttcaagtctgtgtccgacattctgaacaag
ggctccagtgaggatcagaaaggtgccagggaggagctgcgagaacagatgctgagcacc
atgactgcagtgctgaagaatgtccccaacaacactcctcaggaagtgcagctgacggcc
agagcagtggcagggatcaccaagaggagggaagaggtcaatgccgctgctcagctagaa
gctagctccctggtggcagacctcagctcttccctcctctatatgaatgtcagtgagcat
ggtggagaagagatggtgcaggcagctacaccaattgtagaggcagccagcaatatcctg
ggagtctcttcaaatagaaaggtctcaaagactctcctgaacagtatggacaatgtgcag
agtgcactgttaaatggtaaaaaggttggtcaggagcctgccattatcaagagccctgag
atcagtgtgtatgctaacaggatgtctccaaatagcattcagatgcagtctataaacatc
ccagatagctcctctgcaagcttttccttccctcccctgggtgctgatgtcctttctcca
gaggaaccagtggatgtgcgaatgctgagttttgagaagaacccttattcttggagtgag
gggggtaacatcagtggtgccatggggtctgtgacactcaccagacaggatggatcagcc
atctctgtggagaacctgtctgaggaaattgagatcctcttgccgagacttgaaggcggg
caggtaaacagcacaatccttgaactgggaaactacagcacactgatgattgacgtccct
tccccagacataacactggtgctaaagatggagccctcagaggacataccatttgtactg
ttgctggggtataaagactacccaaaggacaagcaatatgtagccaagacgcagatgcct
catcaaggcaattcacaagagagatacacctgggtcctgggtcccaatgatttgacagga
aaagttggggtgcattaccttgtggtgaggcccattgtagaagcaggggttaaatctgtc
aatgccactgtgactgtcacctccattgctgcccagtgcaagtattggaatgaaacctta
tccacctggagtgaagatggctgcagggttggtcctttaaccacgccattggtcactcag
tgcttatgtaaccatttgaccttcttcgggagctctttcttcatcatgcccaaccttgtg
gatgtgtcccgtaccgctgagctctttgccaccttctcagacaaccccgtggtggtgtgc
tttgttggtgccatcttcattgcttatctcttggtggtcgtatgggcacgcaggaaggac
atcaaggacatagccaaggtgaaggtaacattgttggaagataatgaccccttggctgaa
taccgttacatgctgaatatcagcactgggcatcggcgtggtgcttccacctcctctcag
gttactgttactctgctgggcacggagggagagagtgagccacaccacctcgctgaccct
gacaagcctgtgtttgagaggggtgcagtggatacgttcctgttgaccacacccttctct
ctgggggagctgcagagcatcaggctgtggcacgacaactcaggggggcaccctgcctgg
tatataaacaaagtgacggtgcaggatctagaaactggacagaagtggcacttcctgtgt
aactcatggctggccatagatatgggcgagtgcatccttgataaagtcttccctgttgcc
tctgacatagatttgaagaaattcagtaatctgttcttcatgaaaacggcaaaggatttc
cgcgatggccacatctggttttctgtgatcagccggcctccaacgagcaccttcacctgt
gtccagcgagtctcctgctgtttctctctgctgctgtgtaccatgctgaccagcatcatg
ttctggggcatccctaccgacccctctgagcagaccatggacctgggtcatatcgagttc
acctggcagcaggtgatgatcggcgttcagagttcaatcataatgtttccaattaatctc
ctcattgtgagtatcttcagaaacacccgaccccgagagacgaagcctggaaagcccaag
gcagaggtgtccaagcaggggaagactggcagagtgactccttcacagcctccgtcccca
cagagggagagagaactcacaccagacactgtcataaaggacataaagaagattgctcag
tcactctccaaggctatgaagagccccattccacacctggagttagagatgaagcctgga
caacaaactgatatcaactctctgctctctctggtggaggacatcatccggcagcagaac
cgagccagtggagagttctacactgatgcctccaagaaagagggatcgctcattctctca
ctaggggtagccaatctgcaagagaccagcctgtgtgggagccctgagaagactggggat
gggagacagaaaaggagcaacaacagccaatatctgtacaggcagctacgccatgtagag
aaggagctgagcctactgggaccttctcgcttccccaacccagacagctactgccgggca
gtgcagcaggtccaaggcatgagggggctgctagagtcccacctctcctcttccagcctg
ggaggggaccagctgtctcaaagccccagcccagcagagagcagtgagggagacagcagt
agtaagaagcagggcgggctgccctggtggtttgtgttcattggctggattctggtgtta
gccaccagcggagtatcaggatacttcaccatgatgtatgggttgacctatgggaaggac
cgctctataagctggctcatctccatggtcgtgtctttctttgagagcctctttatcact
cagccgctgaaggtgcttggttttgcagccttctttgctctcgttctaaagaaagttgat
caggaagagtatggggatgcaaagtttgagggggagctccgaaatccagatgaccctgat
gtggtgcgggctgtcaggagggatagcacatgcagcttctaccagccccctcctccaaca
gacatcgagaggatgaggagcaatatgatcaaggagcagaaggtctttgccctcatcaaa
gagattctcacctacatggggttcatgtggatgttgctcctggtggcatatggccagcgg
gaccctaatgcttacttcctgactcagcacattcggcagagtttcagccaagggatctca
gacagcatgagtcacaaagatgtgttcacttgggcaaatacctctcttctcagcaacctc
ttcggagagtacccaggtttcatcactgatgggaactccaaactggttggtaatgcccga
cttcgccaggtgagggtgcagaagaactcctgccgcatcgcccgctccatgcgccaggct
atacctgactgccatgctccatactcatgggaggtggaggacatgggctcctatgggcca
ggctggaaccgctctgcgagcgaaaacgcctcaaagaccatgcacagtccctggcagtac
caaacccaggccagactcagagcccaacccacctggggcagtgtggtcctctacagggga
ggggggtttgtggtggacctgggcccagagtcacagaatgctagcagtacccttcaatat
ctgtttgacaacacctggcttgatatgttcacccgagcagtttttgtagagttcactgtg
tacaatgccaatgtcaacctcttctgcactgtcacactcatgctggagaccacagctgta
ggagcgttccagtttcgcagtgagctgcagagtgtccgactataccagtccaccggtgga
ctccatatctttgtcatggcatctgaggtcatctatttcctctttatcctctactatatg
tatgttcagggaaagctgatgaagctgcagaagtgggcttacttcaagacaaagtggaac
ctgctggagctcgccatcatcctcctgagctggagcgcgctgtctgtcttcattaagagg
accctgttagggaaccgggacatggagtactaccacaaccataaagaccagtttgccagt
ttccatgagacagccacagcagatgcagtgctggggtatctgatcgcattcctggtgcta
ctggctacagtcaaactttggcatctgctgaggctcaatcccaagctacacatgatcaca
gccacactgcaacgggcctggactgacatatcaggcttcctcgtggtcatcaccattatg
ttcctggcctattctatcgcttcttatctaatgtatggctggaagctgtactcatatagg
actctcctggatgctgctctgaccatggtcagcttacaactgggcatcttcaactatgac
gaggttcttgattacaacccggtgcttggtgcgttcctcatcggctcctgcattatattc
atgacctttgtggttttaaacctgttcatctcagtcatcctggtggcgttcactcaagag
caaatacatcacaagccctcagaggaggaggagatagtggatctgatgctgatgaagctc
tgcagtttgtttggaatcaaaatgaagaaggagaaagaagacagtgacagccccaaggag
aatggcatgactgcctcagcaactaacaaaggattctccacaatatcctcatag
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integrated database retrieval system
