Oncorhynchus masou masou (cherry salmon): 135541945
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Entry
135541945 CDS
T10723
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135541945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135541945
03036 Chromosome and associated proteins [BR:
omm03036
]
135541945
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135541945
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135541945
PBAF complex
135541945
GBAF(ncBAF) complex
135541945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
135541945
NCBI-ProteinID:
XP_064824535
LinkDB
All DBs
Position
6:complement(33753029..33768649)
Genome browser
AA seq
1060 aa
AA seq
DB search
MAVRKKDGGPNVKYFETSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPMKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEAKLLGKLKDIIKRHQGSVTEDKTCSSHVVVP
IPASLEEEEWVRPVMKRDKQVLLHWGYSPDSYDTWISASEVEAAVEDPPSPEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTIPGDERRDKKPGSAKKRKRSP
SPSPTPTSQESKKKNTKKGPTTPYTKSKRGQREEEPEDLTKDLDEPSPVPAVEEVTLPKT
ANTKKDSELTPVKGGTMTDLDEQEDESMETAEKEEEEGSPSVKGEPVKGSDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSS
LVPLQPKASQTPAAQQILSFPDKVKEKQPADLQNFGLRTDMYSKKTGPPKSKTAANAMRD
WTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDMSSSLGPLA
YQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVE
EAARASGRQDPLYGLEGSGIAGTSLEEGDKPEESSEESKSDSQSSEEKRETKENKDGAME
EDEKQGENGKKEEERGREGEGERDRESEKTETEMGEKEKEGKEALEEGQREGESEGERKA
KVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFE
ELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQTGGPHP
APAPTGPPPQGPSATQSQPAPSIPAPQTAPSPAPSASSVPMTGPSSAQAQPTEPQPTPSG
PHSSPPRPPGHSSTNTTPTLHESSAPGDTLHSSTAAPTPQ
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtaaaatatttcgaaacgtctgatacc
gtctcgcaattcgacaatgtccgcgtttggttgggcaagaattataaaaagtacatccag
gcggagccccccaccaacaagtctctgtccagcctggtggtccagctgctgcagtttcag
gaggaggtgttcggacgacacgtcagcaacccacctctcaccaggctgccgatgaagagt
ttcctggactttaagtctggtggggctctctgccacattctggcagcagcctacaagttc
aagagtgatcagggctggcgcaggtttgactttcagaatccttctcggatggaccgcaat
gtggagatgttcatgactatcgagaaatccctggtacagaacaactgtctgagtcgacca
gtgatctacctgagctctgacattgaggccaagctgctggggaaactgaaggacataatc
aagaggcaccagggctcagtgactgaagacaagacatgcagctcccatgtggtggttccc
atccctgccagtcttgaggaggaggagtgggttcgtccggtgatgaagagagacaagcag
gtgctgctccactggggatactctcctgacagctatgacacctggatctcagccagtgag
gtggaggcagctgtggaagatccgcccagcccagagaaacccaggaaggtccatgccaag
tggatcctggacctggaccagtttaatgagtggatgaatgaggaggactatgaggtcgga
gaggggggccccaagaggaagaggatctcagccaagaccctgacggacgaggtgaccatc
ccaggggacgagcgccgggacaagaagcccggcagcgccaagaagaggaagcgctcaccc
tccccctcgcccactccaacatcccaggagagcaagaagaagaacaccaagaaagggccc
accaccccgtacactaagtctaagcgaggccagagagaggaggagccagaggatctgact
aaagatctggatgaaccatcacctgtacctgctgtagaggaggtcaccctacctaagaca
gccaacactaagaaagactctgagttgacaccagtgaaaggaggtaccatgacagacctg
gatgagcaagaggatgaatccatggaaactgcagaaaaggaggaggaggagggctctccg
agtgtgaaaggagagccagtgaaagggtcggacctccatgaggacaacgtgactgagcag
acccaccacatcatcattcccagctacgctgcatggtttgactacaacagtgtccatgct
attgagcgtagagccctcccagagtttttcaatggcaagaacaaatccaaaacccctgag
atttacctggcctacaggaactttatgattgacacttacaggctgaacccgcaggagtac
ctcacctccaccgcctgtcgtaggaacctggccggagacgtgtgcgccatcatgagggtg
catgcattcctggagcagtggggtctgatcaactaccaggtggactcagagagccggccc
acccccatgggccccccgcccacctcccacttccacgtcctggctgacaccccttccagc
ctggtgcccctgcagcccaaggcatcccagactccggcggcccagcagattctgtcattc
ccagataaggtgaaggagaagcagccagccgacctgcagaactttggcctgaggacagac
atgtacagcaagaagactgggcctcctaagagtaagactgctgccaatgccatgcgagac
tggaccgaacaggaaacactactgctgctagagggtctggagatgtacaaggatgactgg
aacaaggtgtcagagcacgtgggctcacgtacccaggatgagtgtatcctgcacttcctg
cgtctgcccattgaggacccatacctggaggacatgtcctcgtccctgggccccctggcc
taccagcccgtccccttcagccaggcaggcaaccccgtcatgagcaccgtggccttcctg
gcctccgtggtggacccccgcgtggcctccgcagccgccaagtctgccctggaggagttt
tcccgtatgaaggaggaggtcccagcagcactggtggaggcccatgtgaggagggtggag
gaggcggcgcgggctagtggcagacaggaccccctctacggcctggagggcagcggcatc
gcaggcaccagcctggaggaaggagacaaacctgaagagagcagtgaggagagtaagagt
gacagccaatccagtgaggagaagagggagaccaaggagaataaagatggagccatggaa
gaggatgagaagcaaggagaaaacgggaagaaagaggaggagagagggagagagggagaa
ggagagagagaccgagagtctgagaagacagagacagagatgggtgagaaggagaaggaa
gggaaggaggccttggaggagggccagagagaaggagagagcgaaggcgaaaggaaggcg
aaggtggaacgggatgtgggagaggggaacctggctaccgctgctgcctctgccctggct
gctgctgccgtcaaagccaagcacctggctgctgtggaggagagaaagatcaagtctctg
gtggctctgctggtggagactcagatgaagaagctggagatcaaactgagacactttgaa
gagctggagaccatcatggaccgagagagggaggctttggagtaccagaggcagcagctg
ctggcagaccgtcagtcgttccacatggagcagttgaagtatgcagagatgagggcgcgt
cagcagcacttccaacagatccagcaccagcagcatagccagactggaggcccacacccc
gccccggctcccacgggccccccaccccagggcccctcagccacccagtcccagccggcc
cctagtatccctgcaccacaaacagctcccagcccagcaccctctgcctcctccgtcccc
atgactggcccttcctctgcccaggcccagcccactgagccccagccgacccccagtggt
cctcactcctcacctccccgtccgccaggccactccagcaccaacaccaccccaacactc
cacgagtccagcgcccctggggatacactccactcctcaaccgctgctcccactccacag
tga
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