Oncorhynchus masou masou (cherry salmon): 135541957
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Entry
135541957 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135541957
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135541957
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135541957
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135541957
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
135541957
NCBI-ProteinID:
XP_064824560
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All DBs
Position
6:33992559..33997137
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AA seq
486 aa
AA seq
DB search
MALTPRRVRLKPWLVDQVDSGFYPGLVWIDRDKKRFRIPWKHATRHTPHHEEENTIFKAW
ALETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDICDIPQPL
SNPGSSDPGSWTPNDGDEDESDGSEPLPPYPKSNGTSPALMWSPPGSVSPLQPPSCPPSV
EVWPKEEVKLWPKEEPLDMEMQPSPLEMAPPPPLDMPPPPMPDMMFASPEMWISSLPMTD
LEVQFQYRGKEVCPAMTVSNPXGCRLFYGDLGPMVNQEELFGPISLEQLRFPSTEHIAND
TQRVFTNRLLDVMDRGLVLEISGHDIYAIRLCQCKVYWSGPCAPNPKAPNLIERQRKIKL
FCLESFLSDVIAHQRGQSASPPQFDINLCFGEEWPDSRPKEKKLIMVQIIPVVARMITEM
FSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWPQALAPGAGMHLS
PGLHAQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaccccgcggcgtgtccggctcaagccctggctagtggaccaggtggacagt
gggttctacccaggcctggtgtggattgacagagacaaaaagcgcttcaggatcccctgg
aaacacgctacacggcacaccccccatcacgaggaagaaaacactatttttaaggcctgg
gcattagagaccggaaagttccaggagggtattgatgatcctgaccctgccaagtggaaa
gctcagctccgctgcgccctcaacaagagcagagagttcaaccttgtctacgacggcacc
aaagaagtccccatgaaccccctgaagatctacgacatctgtgacatcccacagcccctc
agtaacccaggatcttcagaccctgggtcttggacaccaaatgatggggatgaagatgaa
tcagatggctcagagcccctccctccttatccaaaatccaatggcaccagccccgctctt
atgtggtctccaccggggtctgtatcgcccctccaaccccccagctgccccccatcagtt
gaagtgtggcccaaagaggaagttaagctgtggcccaaagaggagcctttagatatggag
atgcagccttcgcccctggagatggcgcccccccccccactggacatgcctccccctccc
atgcctgacatgatgttcgcctccccagagatgtggatcagctccttgcctatgacagac
ctggaggtgcagttccagtaccggggtaaggaggtgtgtccagccatgacggtcagtaac
cccnagggctgtaggcttttctacggggacctaggtcccatggtcaaccaggaggagctg
tttggtcctatcagcctggagcagctgaggttcccctctactgagcacatcgccaacgac
acgcagagggtcttcaccaaccgcctgttggatgtcatggaccgaggcctcgtcctggag
atcagcggccatgacatctatgccatccgcctctgccaatgcaaggtgtactggtcaggc
ccttgcgcccccaaccccaaagcacccaacctcatagagaggcagaggaagatcaagctg
ttctgtctggagtcctttctcagtgatgtgatagcccatcagaggggccagtcggccagc
cctcctcagttcgacatcaacctgtgctttggagaggagtggcctgacagcagacccaaa
gagaagaagctcatcatggtgcagattattccagtggtagcacgtatgatcactgagatg
ttctcaggcgactgcatgcgctccttcgacagcggcagtgtgcgcctgcagatctccatc
ccagacatcaaggacaacatcgtgacccacctgaagcagctataccgcctgctgcagacc
caccagggccaggaaggctggcctcaggctctggccccaggagccggcatgcacctgtcc
ccgggcctgcatgcccagtga
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