Oncorhynchus masou masou (cherry salmon): 135542009
Help
Entry
135542009 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: calmodulin-binding transcription activator 1
KO
K21596
calmodulin-binding transcription activator
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135542009
Transcription factors [BR:
omm03000
]
Eukaryotic type
Other transcription factors
Others
135542009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
AGRB_N
Stereocilin
Motif
Other DBs
NCBI-GeneID:
135542009
NCBI-ProteinID:
XP_064824637
LinkDB
All DBs
Position
6:36099283..36242390
Genome browser
AA seq
1588 aa
AA seq
DB search
MAAENKPEGLKRIRNPERMIRIAVGYTGHAPPKSDDTDTNGEPGQLKIYLPKKLLECLPK
CSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYC
WKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVP
AVDDSGKPCGPVLCSINTDRKEWAKWSKEELIGQLKPMCAGSSLHQKCSTAKHRIISPKL
EAKTGTGDGTGTGAGTGSGTGTGSGTEVQNSDVSEGQTVPSPGVGARSRGGGERKNGRLP
KPSLLPQSSMEVSSTSTNQVEVPDTTQSSPLSITSDITADSPALGLASSLSQSSAAVFMS
EVATVTGDSVYTTEHAQLIGSTHDATTTGILLAVAPDTQRFEFPGGGVSRGXGGELVLSS
SLDAGGSGVNLLETSMNFDPDCFLNNPKQGQTYGGGGGKAEEGSCNSEGGLRCSPQSLTA
NGYVFNATLVNIKTEDTPLEQPLDNQSGYAGEGTGLSPSTTLEQMDFSAVMSSACAQSLA
QQIHQHSPSLFLQASPKTPLAQATQPQICASETGQNSDETQAYLGLPTIPQTDSTGTNGD
PHTYLHQPSPDQHGHSEESSQGGLVGLGSFPVRVQEMRKDQLSTRGPGKVTSPEKETQKR
AELLLNPGEQHEAYRNNTGVGRGGDHYLQPTTKSGGVEGGQEIGEKYIFSNGVRDAGVNS
SVVDSPQSLAGAAMEGXLYSSTLPQPGVGEAGGAEGAGGGISLEGFEASFGNQFSDLIND
FISVEGGGGGAVAGTGGSALYTPALMPQEEVGEGQEAGAAPIQGSEVEQGPLRLLPETGR
LFGVTDYSPEWSYPEGGVKVLITGPWLEASREYSCLFDHISVPAALIQPGVLRCYCPAHE
TGLVMLQVAMGGDVISSSVVFEYKARDLPALPSSQHDWLSLDDTQFRMSILERLEQMEQR
MAEITNHHQSSETTAATGGGGGAGGTDHQSQLSPAEGSFEGRVVVVCEKMMTRPCWVSSN
QLIHSRSSRGMTLLHLAAAQGYAGLIQTLIRWRTKHADSIDLELEVDPLNVDHFSCTPLM
WACALGHTEAALVLYQWDPRALAIPDSLGRLPLSIARSRGHTRLAELLEQLQQTPPTQSP
PTDTWMDRWSSESEPSGHRESPAPSSNPDLRRTRTEPQQSTQNHSQSQSWAHQGQPQLQG
QHRGPPDNQGDQPPAKRLKLNPEAQQQPVNPPRSQLPNLSPLNTHPPRPSSNTPNPHFPS
PPLQARLGGSGGGSRYSLRQALGRRSLARRILGKERLANHLRQRGVSTRGEEPELLTYQE
NSEDLQMNMMMLAEHIMEATPDRIKQEGFVATETETSPPETVGVSGDVSWLASYIGDVER
FLYSRPQMPTPSPIPSPLSGPEDEESPLAPQGLPSPADWSSFLHASLSGEGPDTNPAHLT
LTEAEQRELYEAARHAHHTLRKYKGRPIQEQRKETVAVVQRCYKKYKQLSWIALKYALYK
RMTLAAILIQSRFRSFHEQRKFQQSRRAAVLIQQYYRSYRHSLSSLLTKRQNQAARKILR
FLLRCRHSLLMDHRPVKRGKRAEKGQGS
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaaaacaagccggaagggttgaaaaggataaggaatccagagcggatgatt
agaattgccgtgggatacacaggacatgcccctcccaagagtgatgacactgacaccaac
ggtgagcctggccagttgaagatctacctacctaagaagctgttggagtgtttgcccaaa
tgttcctctctgcccaaggagcgccaccgctggaacaccaatgaggagattgcagcgtat
ctgatcacatttgagaaacatgaagaatggctgacgacatcacccaagaccagacctcag
aatggctcgatgatcctgtacaacaggaagaaggtaaagtacaggaaggatggctactgc
tggaagaagaggaaagacgggaagaccaccagagaagaccacatgaagctcaaagtacag
ggagtggagtgtctgtatggctgttatgtccactcctccatcatccctacctttcatcgc
agatgctattggctgctccagaacccagacatagtgttggtacactacctgaacgttcca
gcggtggacgacagtgggaagccatgtgggcctgtcctctgctccatcaacacagacagg
aaggagtgggccaagtggagcaaggaggagctcattggacagctcaaacctatgtgtgcc
gggagtagcctgcaccagaaatgctccacagccaaacaccgcattatctcccccaaatta
gaagcaaagacagggacaggggatgggactgggacaggggctgggacagggtctgggaca
gggacagggtctgggacagaggtgcagaacagtgatgtgtctgaggggcagacagtgccc
agtcctggagtgggggccaggagcagaggagggggggagaggaagaatggaaggctgccc
aaaccctccctgcttccccagagcagcatggaagtctcctccacatccaccaatcaggtg
gaggttcccgacaccacacagagctccccactgtcaatcaccagcgacattactgcagac
agtcctgccctcggcctggccagcagcctatcacagagctctgctgctgtgttcatgtcc
gaggttgccacggtaacaggggattccgtgtacaccacagaacacgcccagctgattggc
tccacccatgacgccaccaccactgggattctactggctgttgccccagacacccagcgc
tttgagttccctgggggtggggttagcagaggannaggaggggagttggtcctctccagc
agtctggatgctggaggttctggagtcaaccttcttgagaccagcatgaactttgaccca
gactgcttcctcaacaaccccaagcagggccaaacatacgggggaggagggggtaaggcc
gaggaaggtagctgtaatagtgagggggggctccgctgctctccacagtcactaacggct
aacggctatgtattcaacgccacgctcgtaaacatcaagaccgaagatactcccctggag
cagccgctggataatcagagcgggtacgctggcgaggggacgggcctgagccctagcacc
acactggagcaaatggacttcagtgctgtgatgtcatcagcctgcgcccagagcttggca
cagcagatacaccaacactcccccagtctcttcttgcaggcctcccctaagacccccctc
gcccaggccacccagccccagatctgtgcctctgagacgggccagaactcagacgagacc
caggcttatctgggcctacctactataccacagactgactctacaggcaccaacggagac
cctcacacatacctccaccaaccctcaccagaccaacatggccacagtgaggaaagcagc
caggggggtctagtggggctgggtagctttcctgtaagggtgcaggagatgagaaaagac
cagctgagcaccagaggacctgggaaggtgacgtccccagagaaagagacacagaagagg
gcagagttactcctcaatcctggggaacagcatgaggcctacagaaacaacactggtgtt
gggagaggtggagatcactacctacagccaacaaccaagagtgggggagtagagggagga
caagaaataggagagaaatatattttcagtaacggggtcagagatgcaggagttaacagc
tcagtggtggacagtcctcagtctctagctggagcggccatggaggggnngttgtacagc
tctactcttccccagccgggtgtaggtgaggctgggggagctgagggggcaggcgggggc
atcagcctggaaggctttgaggcatcgtttgggaaccagttctctgacctcatcaatgac
ttcatctctgttgaggggggtggagggggggcggtggccgggacaggaggcagtgcactc
tacacccctgctctgatgccccaggaggaggttggagagggccaagaggcaggagcagcc
cccattcagggttcagaggtggagcagggacctctgagattgctgccagagacggggagg
ctttttggggtgacagactactctcccgagtggtcttacccagagggtggggtgaaggtg
ttgataacaggtccctggctggaggccagcagggagtacagctgtctgtttgaccacatc
agtgtcccagctgctctcatacagccaggagtactgcgctgctactgccctgcccatgaa
acaggtttggtgatgctgcaggtggctatgggtggggatgtaatctcttcctctgtggtg
tttgagtataaagctcgagacttgcccgccctgccctcctcacaacacgactggttatcc
ctggacgatacccagttcaggatgtccattctggagcgtctggagcagatggaacagagg
atggctgagataaccaatcaccatcagagctccgaaaccacggcagctacggggggaggt
ggaggagcaggtggcactgaccaccagtcccagctctccccagccgagggttcatttgag
ggccgtgtggtggtggtgtgtgagaagatgatgacccgtccctgttgggtttcctccaat
cagctgatccacagccggagttcccggggcatgaccctgctgcacctggctgcagctcag
ggatacgcagggttaatacagactctcatccgctggcgcactaagcatgcagacagcata
gatctggaattagaggtggaccctctcaatgtcgaccacttctcctgcaccccactgatg
tgggcctgtgctctgggtcatacagaagcagcgctggttctgtaccagtgggaccccaga
gctttggccatccctgattcgctgggccgtctgccactcagtattgcacgctcacgggga
cacactcgcttggccgagctactggagcagctgcaacaaactcctcctactcagagtcca
cccactgacacctggatggacaggtggagcagtgaatcggagcccagtggacatagggaa
agccccgcccccagctctaacccagacctaaggagaaccaggacagaaccacagcagagc
acccagaaccacagccagagtcagagctgggctcaccagggccaaccccagttgcaaggc
caacaccgggggccaccagacaaccagggagaccaaccaccagccaagagactcaaactc
aaccctgaggcccagcaacagccagtcaaccccccacgctctcaactacccaacctcagc
cccctaaacactcacccccccagacccagctctaacaccccaaatccccacttccccagc
ccacctctgcaggccaggttaggggggtcagggggtggcagtaggtatagcttgcggcag
gctcttgggaggcggagtttggccaggaggattctgggaaaggagagactggccaatcat
ctgcgtcagaggggcgtatccaccaggggggaggagccagaactgctgacctatcaggag
aacagtgaagacctgcagatgaacatgatgatgctggcagaacacatcatggaggccact
cctgacaggatcaaacaggagggctttgttgccacggagactgagacgtcgccaccagag
accgttggggtcagcggtgatgtcagctggttggctagttacattggtgacgtggagcgg
tttctatactccaggccccagatgcccaccccaagccccataccaagcccgctgtctggg
cctgaggatgaggaaagtcccctggctccgcaaggcctgccctccccagccgactggagt
tccttcctgcatgcatcactcagtggagaaggcccagacaccaaccctgcccacctcaca
ctgacagaggcggagcaaagagaactgtacgaggctgcaagacacgcccaccacaccctc
agaaagtacaagggccggccaatccaggagcaacgtaaagaaacagtagcagtggtccag
cgctgctataagaaatacaaacagctgtcatggatagccttgaagtatgcactttataag
aggatgacgctggcagccattttgatccagagccgcttccgcagtttccacgaacagagg
aagttccagcagagccggcgagcagcagtactgatccagcaatactaccgcagctacaga
cactctctcagcagtctcctcactaagagacagaaccaggctgcccgtaagatcctgagg
ttcctgctcagatgccgccacagcctcttgatggaccatagaccagtcaaacggggcaag
agagcagagaaaggccaggggtcctga
DBGET
integrated database retrieval system
