Oncorhynchus masou masou (cherry salmon): 135542043
Help
Entry
135542043 CDS
T10723
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135542043
03012 Translation factors [BR:
omm03012
]
135542043
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135542043
mRNA cycle factors
Stress granule specific factors
135542043
Translation factors [BR:
omm03012
]
Eukaryotic type
Initiation factors
eIF-4
135542043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
135542043
NCBI-ProteinID:
XP_064824708
LinkDB
All DBs
Position
6:39593420..39672119
Genome browser
AA seq
1809 aa
AA seq
DB search
MSLPTKLVPKPATVAVSGPGTVPSPSSQLRATLTSVSLPPGAPGAPQSNAVPPPQIFLNM
TRPRIPRVQPSLDDRIFPTQPGVTAVYSVPRHPGPPYTAHDITKGHPNLAGTPPGHAHSP
ALSQVSVPTASPYRYPKGWEAGGGSPYTTGQNAGSTPLVYSPQTQQMNAQPQSRPSSMPS
PSPSPPVIWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNTSSLRPGSQNPTA
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQPFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQFYPGQQVYPPLTPIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQFLWPHPHYPHIFYLKSQQQQPSGSQTPEQGQG
QAHPAYSLEPPKQQQPTPGAADSKPGPVYDKPKLEPVIRKPSSPGIGQPEPSMAWREASA
PVTAPSPPVEKELPSPAPVMVAPIPAPRPVASPNPIEQPSAVEPATTTPSAAEPKTLPAM
THSQTPNTVEPLPESPHTLAASPTLTPKALNGYADTGAELDTQAQEPPPQDPSPPQPQAS
TPAFREDCSEAVPSEVRAEIPPAVTDSIAPITVVPVTLTSKPAPAFPAPPPGLPPLVQAT
AEASKPADTKDVPLKAGTEAFITPDNKPQLQALSRKSPTTGCQAAPDAPKTWKKPNEESP
VGDAQQRETEEELKPLEEAAGDQALPPTRSCSTSPPPSAAPSALEAEEIPPAPEENGEAE
PMRNGAGHTSETESSDSGATPGDNEGSTGAPPDLFQEDLETNGKRQYKRDFLLGFQFMAA
CTQKPDGLPQISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRGGAAV
SHTHSQAHQMMNMGGGARRPPPRKIILNVSANEEVQLKKAENAWKPGMKRAGPSDDPEVI
TTQELFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGFSVAY
GNMCRCLTTLKVPMTDKPGTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSAQSSD
QERLRLELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLC
RLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVSRRAD
QGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDTKRRPEQQQQQREQQREQQREQRVQQRD
ETWNTVPMTKNSRTIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSELSRS
GGGGASLNRYSALQSTQSHQTTPPAQNLEYDTRRTLGSRSSAGRERSEKPLSPASSRPGS
FVRGGSAKELLESPALSPEEPRRELESPSVSEDKTEPERSSAREPVKAEPVVAQSPDRPA
LSEEEMERKSRAIIDEFLHINDYKEAVQCVDELDMSSQLHVFVRVGVESTLERSQITRDH
MGKLLFQLVQQDILARSQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDRGFSMR
ELFSELSKPLLPVGRAGILFSEILHILCKQMSHRKVGTLWRESGLSWSDFLPEGEDVQDF
ISEQKLQFTEADCSSHEAALATTALSFVVLNQQLERLLLEDMASDEQIFDWVEANLDESQ
MSSSPFLRALMTAVCKAAVKDESASCRVDVAIIQRRLPVLLKYLNSDTERQLQALYALQA
LIVTLDQPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEELGKGVALKSVTAFFTWLR
EAEEESEDN
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgacgaaattagtcccaaaacccgccactgtcgcagtaagtggacctgga
actgtcccgtctccgtcgagccaactgcgggctaccctgacctccgtgtctttaccaccg
ggagccccaggtgctcctcagtcgaacgccgtgccgccacctcaaattttccttaatatg
acgcgtcccaggatccctcgggttcagccatccttggatgaccgcatcttccccacacag
cccggcgtcactgccgtctacagcgtaccgaggcaccctggtcctccctacacggctcat
gacatcacaaagggacaccctaacttggcgggcacaccgccagggcatgcccactcaccg
gcgctctctcaggtatcagtacccacagcttccccatatcgctaccctaagggctgggag
gcaggcggagggtctccgtacaccactggacagaatgctggctccacacctcttgtgtat
tctcctcagacccagcaaatgaatgcacagccacagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatatggaaccaccagtttgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccaccaacacttcatctctgcggcccggctctcagaaccccacagcg
gcggtatacccccccaaccagcccaccatgatgatgatggcccccatgcccttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagccgttttcagtgcagccgccgggatctggcaccttctatcctggccctgggccg
ggggagtaccctgctcagtatgctcccggacctcaattctatccaggacagcaggtgtac
ccccccctcacccccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgtgaccccaatcagggaggcagggacatcaca
gaggagatcatggcagggggcacagggagccggaatccaactccccctgtcggacgaccc
tcctccacccccacccctccgcagtttttatggccgcaccctcattatcctcacattttc
tacctcaaatcgcagcagcagcagccgagcggcagccagactccggagcagggccaaggc
caggcccacccagcctacagcctggagccccccaagcagcagcagcccacgcctggggct
gcagacagcaaaccagggccagtatatgataagccaaaattggagccggttatccggaag
ccttcctctcccgggattggacaaccagaaccttctatggcgtggcgagaggccagtgca
cctgtaactgccccatctccccctgtagaaaaagagcttccctctcctgccccagtgatg
gtggcgcccatccctgcccctcgtcctgttgccagccccaaccccattgagcagccctct
gcagtggagcctgctactaccactccctctgcagctgagcccaagaccctgcctgccatg
actcattcccagaccccaaacacagtggagcctcttccagaatctccacacaccctggct
gcttcccccaccctaaccccaaaagctttgaatggctatgctgacactggtgctgagctg
gacacccaggcccaggagccccccccccaagatccctccccaccccagccccaggcttca
accccggccttcagagaagactgtagtgaggctgtgcccagtgaggtgagagcagagatc
ccccctgctgtcacggactctatcgcacccatcactgtagtgccagtcactctgacctcc
aaacctgcgcctgcttttccagcacctccccctggccttccaccactagtgcaggccaca
gcagaggccagcaagcccgccgacactaaagacgtccctctcaaagcagggacagaggca
ttcataacaccagacaacaagccacagctacaagccctctccagaaagagtcccactaca
ggatgtcaggctgctcctgatgcaccaaagacctggaagaaaccaaatgaagagagtcct
gttggagatgcccaacagagggagactgaggaggagctcaagcctttggaagaggctgct
ggagaccaggccctgccacccaccaggagctgcagcacctcacccccaccctcagcagct
ccctcagccctggaggcagaggagattcccccagcccctgaggaaaacggggaggctgag
cccatgaggaacggagcaggacacacctcggagactgagagcagtgacagtggggccacc
cctggggacaatgagggctccacaggagcacccccagacctcttccaggaagatctggag
actaatgggaagcgtcaatacaaacgggacttcctgctgggctttcagttcatggctgcc
tgtacacagaagccagacgggctgcctcagatcagtgacgttgtgctggacaagataaac
caaaacaagctgccaacccgggcggtggaatccagggtgatctcccgaggccctgacttc
acaccggcctttgctgactttggcagacagatgagtggaggacgcggcggagctgcagtg
agtcacactcactcccaggctcaccagatgatgaacatgggggggggtgcccggcggccc
ccgcccaggaagattatcctgaacgtgtcagcgaatgaagaggtgcaactgaagaaggct
gagaatgcctggaaacccggcatgaagagggcggggccatcagatgaccctgaggtcatt
acaacacaggagctcttccggaaggtgcgcagtatcctcaacaaactgacgcctcagatg
ttcaaccagctgatgaagcaggtgacagacctcaccatcgacacggaggagcgcctcaag
ggcgtcatcgacctggtctttgagaaggccatcgacgagcccggcttctctgtggcctac
gggaacatgtgtcgctgcctcaccacgctcaaagtgcccatgacggacaaacccggaacc
acagtgaacttccgcaaactgctgctcaaccgttgtcagaaggagtttgagcgggacaag
gtggatgatgtggtgtttgaaaggaaacagaaggaacttgactctgcacagtccagtgat
caagagagactacggttagagctggaggaggccaaggacaaggcccgccggcgctccata
gggaacatcaagttcattggggagctgttcaaactcaagatgctgacagaggccatcatg
cacgactgcgtggtcaagctgctgaagaaccatgacgaggaatcgctggagtgcctttgc
aggctgctcaccaccatcggcaaggacctggactttgagaaggccaagccccgcatggat
cagtatttcaatcagatggagaaaattgttaaggagcggaagacatcgtctcggatacgg
tttatgctgcaggatgtgatagacctccgattgcacaactgggtgtccaggagagctgac
cagggccctaagaccatcgagcagatccacaaagaggccaagattgaggagcaggaggag
cagaggaaggtgcaccagcagctgctctccaaggacaccaagagaaggccagagcaacaa
cagcagcagagagaacagcaaagggagcagcagagggagcagcgtgtgcaacagagagac
gagacctggaacactgtgcccatgaccaagaacagcaggacgatcgaccccaccaagatc
cccaagatctccaagcctcagatggatgagaagatccaactcggaccacgagcctcactc
aactggatgaagggcagcagcggaggggccaaggccagtgactccgaattatcccggtct
ggtggtggtggtgccagtttaaaccggtactctgcactccagtccactcaatctcatcaa
accaccccaccggcacaaaacctagagtatgacactagaagaaccttgggcagtcgaagc
agtgcagggagagagcgaagtgagaagcccctgagcccagcttcgtcgaggcccggttcc
ttcgtccgaggcgggagtgccaaggagcttctggagagcccggccctgagccctgaggag
ccccgcagagagctggagagccccagcgtaagcgaggacaagactgagccagagcgcagc
agtgccagggagcctgtgaaagcagagcctgtagtggctcagtctccagacagacctgcc
ctctctgaggaggagatggagaggaagtccagagctatcattgacgagttcttgcacatc
aacgattataaggaggctgtgcagtgtgtggatgagctggacatgtcctctcagctccat
gtgtttgtgcgtgtgggggtggagtccactctggagcgcagtcagatcacacgggaccac
atgggcaagctcctcttccagttggtgcagcaggacatcctggccaggtcccaattcttc
aaagggtttgctgacacccttgagctggcggatgacatggccattgacattccccatatc
tggctgtatctggccgagctgctcagccctgtgctgagagacaggggcttctctatgaga
gagctctttagtgaattaagcaaacctttacttcctgtgggaagagctgggatcttattt
tctgaaatactgcacatactatgcaaacaaatgagccataggaaagtgggcaccttgtgg
agagagtcgggcctcagctggagtgacttcttgccagagggagaggatgtccaggatttc
atctcagagcagaagctccagttcactgaggcggactgctccagccatgaggcagccctc
gccacgacagcactgtcctttgtggtgctcaaccagcagctagagagactgctgctggag
gacatggccagtgatgagcagatctttgactgggtagaggcaaatctagatgaatctcag
atgagctcctctccgttcctgagagctctgatgacggctgtgtgtaaggcagcggtgaaa
gatgaaagtgcttcctgtcgagtggacgtagccatcattcagaggagattgcccgtatta
ctcaagtaccttaactcagacactgagcgacagcttcaagcactttatgcactgcaggcg
ctgatagtcactttggatcagcctcctaacctgctccggatgttctttgattgtctgtat
gatgaggacgtcatctcggaggacgctttttacaagtgggagaccagcaaagacccagca
gaggagctgggcaagggtgtggctctcaagtctgtaacagctttcttcacctggctgagg
gaagccgaggaggagtcggaggataattga
DBGET
integrated database retrieval system
