Oncorhynchus masou masou (cherry salmon): 135542076
Help
Entry
135542076 CDS
T10723
Name
(RefSeq) transcription factor COE2 isoform X1
KO
K09103
early B-cell factor
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135542076
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
135542076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
135542076
NCBI-ProteinID:
XP_064824789
LinkDB
All DBs
Position
1:31835026..31876668
Genome browser
AA seq
583 aa
AA seq
DB search
MYGIQEHLIRDVSGLKERTLGEEMDPVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVEVERTSFVDFVEQDKEQTGEKTNNGTHYKIQLLYSNGV
RTEQDLYARLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLEPGESVENGMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPDKLAKEMLLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQ
LQALPSSPAHGSVMGLGSYPSQLGVSIGEPGQTSQGYIRNSSSLSPRGYPSASTPQQSGY
GGGGGMSGGYGAVPMTSLGVPGSPGFSSASPTGSPYGIMPSSPTIPGSSSSSSLLPFSSF
PSSAKQKSAFAPVLRPQGSSSPACPASGGNSFRAMTGLVVPPM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggatccaggagcatctgataagagacgtcagcggattaaaagaaagaactcta
ggagaggagatggatccagtccggtcctgggtgcgtaatgtcggtgttgtggatgctaac
gtagcagcgcaaagtggtgtagctctctccagggcccactttgagaagcagcccccctct
aacctgcgcaagtccaacttcttccacttcgtcctggcactctatgacagacacggacag
cctgtagaggtggagaggacttccttcgtggactttgtggaacaggacaaggagcagacg
ggagaaaagaccaacaacggcacgcactacaagatacagctcctctacagcaatggggtt
cgtacggaacaggatctttatgcacgacttattgactcagtcactaaacagcccatagca
tatgagggacagaacaagaatcctgaaatgtgccgtgttcttctcacccacgaggttatg
tgcagtcgctgttgtgagaagaaaagctgtggaaaccgcaacgagacaccctctgaccca
gtcatcattgacagattcttcttgaagtttttcctgaagtgtaaccaaaattgcctgaag
acagcagggaacccaagggacatgaggagatttcaggtggtcctgtccagcactgtgagt
gtagacggacatgtcttagctgtgtctgacaacatgtttgtccacaataactccaaacac
ggccggagagcccgcaggctggagccgggagagtcagtggagaacggcatggaatacgcc
accccctgtatcaaagccatcagccccagtgagggctggaccacgggcggggccatggtc
atcgtgatcggggagaacttctttgacgggctgcaggtggtgttcggcagcatgctggtg
tggagcgagttgatcacgccccacgccatccgtgtccagacgccccctcgccacatccca
ggggtcgtggaggtcacgctgtcctacaaatccaaacagttctgcaaggggacacctggg
cgcttcatctacacagcgctgaatgagcccaccatagactacggtttccagagacttcag
aaggtcatccccagacaccctggtgaccctgacaaactggccaaggagatgctactgaag
agagcagctgatctggtagaggccttgtatggaaacccacacagtaatcaggacatgttg
ctgaagcgtgcagcggacatcgctgaggccctgtacagtgttccccgtccccacagccag
ctgcaggccctgcccagctccccagcccacggcagtgtcatgggcctgggctcatacccc
tcccagctgggggtcagcatcggagagccaggacaaaccagccagggttatattcgtaac
tccagcagtttgtccccacggggatacccctctgcctccacccctcagcagtcgggctat
gggggaggtggaggcatgagtggcgggtatggggcagtgcccatgactagtctgggggtg
ccaggatcccctggttttagcagtgcctcccccactggttctccctatggcataatgcca
tctagtcccaccatcccgggttccagctcctcctcctccctcctgccattctcctccttc
ccgtcctcagccaaacagaagagtgcctttgctcccgttctccggccccagggatcctcc
tctcctgcctgccccgcctcaggaggcaacagcttcagagcgatgaccggcctggtagtt
cccccgatgtag
DBGET
integrated database retrieval system
