Oncorhynchus masou masou (cherry salmon): 135542133
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Entry
135542133 CDS
T10723
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04217
Necroptosis
omm04622
RIG-I-like receptor signaling pathway
omm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
135542133
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
135542133
04625 C-type lectin receptor signaling pathway
135542133
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omm01002
]
135542133
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135542133
Enzymes [BR:
omm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135542133
Peptidases and inhibitors [BR:
omm01002
]
Cysteine peptidases
Family C67
135542133
Ubiquitin system [BR:
omm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135542133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
zf-HIT
Motif
Other DBs
NCBI-GeneID:
135542133
NCBI-ProteinID:
XP_064824894
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All DBs
Position
6:45917508..45927633
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AA seq
711 aa
AA seq
DB search
MEFKGDGKEKFFIVTRGKVRKGFSRGCIGRVEAVMHKGELMGLLYGGGSSGNPKSGDMVK
REDTYPLTRHQAQLLLFVSPSSKRLELLCNPQLFSAICVLSQDDLVVVKHKKGHQPGLVR
NLMLIGKKENQGDLLMLGFEVEFVQDSDQTVSPKKPSHLPLFSAADIVQVVPAYSVGIGP
RWKDSYSEGLNRKAVPPINSMSNMGSRGRQVRDINHLDQNVTQTPTQSPSHHPFEVGSMV
EVTSNTGITVYGVIRWMGVLSENKNDWAGIELDYEVNNCSDGTYGGQQYFTCKGGRALFV
PLTKCSPDGRFLCPPSEKETLKATDIPPVIPLEETDENVPPIPESEALSLLVGKMKGIQG
HYNSCYLDATLFSLFCSSMTLDSVCHKPDGTEKSISRSLKKDIVNCLRRQGFVPAESVMN
FRKQLGCDTFVTEEKDPEEFITILLQRVLCMKSLLKLRSNDDTSQDAYTFQIILDKEQVT
KTPTVQQLLDVSLLSCGLKFEEIPSCLMVHMPRFGKKYKMFPYIIPSTEFDITDLLYNSP
RECFLCGRLAEYECPQCLQDRKLQPGRIKQYCTTCKTQVHIHPSRQSHCPKALAVPAEVP
ADAPVPRHKMQLFAVLCIHTSHYVSFVKYGPGPRSWLFFDSMADRCVPSGDDQSGYNIPE
IRACPEVGDFLSQSEEELARADPSQAGEPVRRLLSDSYMCLYQSASMALYR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaaggagatgggaaggaaaagttcttcatagtgacacgggggaaggtgaga
aaaggcttctccagaggatgcatcggccgtgtggaagcagtgatgcataagggagagctg
atgggactgttgtacggaggtggcagcagtgggaatcccaagagtggggacatggtgaag
agggaggacacgtaccccctcacccgacaccaggcccagctgctgctcttcgtgtccccc
tccagcaaacgcctggagctcctgtgtaacccccagctcttttcagccatctgtgtactg
tctcaggatgacttagtagtggttaagcacaagaaaggtcaccagccaggcctggttcgg
aacctgatgctgatcggtaagaaggagaaccaaggggacctgctgatgctgggctttgag
gttgagtttgtgcaggactctgatcaaacagtgtcccctaagaagccatctcatctcccc
ctgttcagtgcagcagacattgtccaggttgtcccagcatactctgtaggcattggccct
cgctggaaagacagttattcagagggtctaaacagaaaggcggtgccacctatcaactcc
atgtctaatatgggatctcgtggacgacaagtgagagatataaaccatttagaccagaat
gtcacccaaaccccaacccaaagcccgtcacaccacccttttgaggtgggatccatggtg
gaggtaacatccaacactgggataactgtatacggggtgatccgttggatgggcgtcctt
tcagaaaataaaaatgactgggccggaattgagctggattatgaggtgaataattgctca
gatgggacgtatggaggccagcagtatttcacttgtaaagggggcagggccttgtttgtg
cccctcacaaagtgcagtccagacggaaggttcttatgtcccccctctgaaaaggagaca
ctcaaagcaacagatatccccccagtcattccattggaggaaacagatgagaatgtccct
cctatccctgagtcggaagccctgtctttgctcgtgggcaagatgaaggggatccagggg
cactataactcctgctacctcgacgccactctcttcagtctgttctgctcatctatgacc
ctggacagtgtttgccacaaaccagatggcacagaaaagagcatatctcgctctctgaag
aaagacattgtcaactgtttgcgcagacaaggttttgtgcctgctgagagcgtaatgaac
ttccgcaagcagctcgggtgtgacacctttgtaacagaagagaaagaccctgaagagttc
atcacaatccttctacagcgggtgctttgcatgaagtcattgcttaaactcaggtcgaat
gacgacacatctcaggatgcctacacattccagattattctggataaggagcaggtgaca
aagactcccactgtccagcaactcctggatgtctccttgctgtcttgtggcctcaagttt
gaggagatcccatcctgcctcatggtccacatgccaaggtttgggaagaagtacaagatg
ttcccctacattatcccctcaacagaatttgacatcacagatcttctatacaactccccc
cgagaatgcttcctctgtgggcgtttggcagagtacgagtgcccccagtgcctacaagac
cgcaagctccagccaggaagaatcaaacagtattgcactacctgcaagacacaggtgcac
attcatccctctcggcagagccactgccctaaagccctggcagtgccagcggaggtgcca
gcagatgcccctgtacccaggcacaaaatgcagttgttcgctgtgctctgtatccacacc
agccactatgtgtcctttgtaaagtatggccctggccctcgctcctggctcttcttcgac
agcatggcagacagatgtgtcccctcaggtgatgaccagagtggctacaacattccagag
atcagggcttgtcctgaggtgggtgacttcctgtctcagtcagaggaggagctagcgcgg
gctgacccctcccaggctggagagcctgtccgcaggctgctgagtgactcctacatgtgt
ttgtatcagagtgcctccatggcactctacagataa
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