Oncorhynchus masou masou (cherry salmon): 135542142
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Entry
135542142 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083
Polycomb repressive complex
omm04980
Cobalamin transport and metabolism
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135542142
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
135542142
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135542142
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135542142
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135542142
03029 Mitochondrial biogenesis [BR:
omm03029
]
135542142
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135542142
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
135542142
HMT complexes
COMPASS/SET1 complex
135542142
MLL-HCF complex
135542142
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
135542142
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135542142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
135542142
NCBI-ProteinID:
XP_064824916
LinkDB
All DBs
Position
6:complement(46095447..46108939)
Genome browser
AA seq
1665 aa
AA seq
DB search
MTGSALQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQW
FIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLKAKTPK
NGXTPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWDI
PITYGVLPPPRESHTAVVYTEKDSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWTKPSVNG
TAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMAWESV
VMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPHAPSR
VQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAATAVTSPALNAATSLQGNLPKGPAT
AAPSAQNLPHTGITIVPQASSPTILPNIPRSPLAASTAHGPAILKVAAPPSGTGTSLVTV
RPNQAGKSPVTVTSLLPGVRMVVPAQTAQGTPVGSSPQMSGMAALAAAAAATQKIPPSSS
TVLNIPAGATLVKTMAGSTTVKMASPLMVSNPATRMLKTAAAQVGTATVSSPNSPNRPII
TVHKSGTVTVAQQHQVVTTMVGGVTKTITLVKSPLTMGGSGTLQISNLGKMMSVVQTKPV
QTSAVTGQASTNPLTQFIQTKGSLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILN
ISGMSPTTTKQGTTIIKTIPMSAIMTQPGATVTSSTGKTPYTIISTKMMTTGTPGKIITT
MPKLGTATGQQALTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTMSSVKPNITTLVVKGT
TGVTTLGTVTGTVSSSLAGSIVASSNASLATPITTLGTIATLSSQVINPTAITVSAAQTS
LTTATTLSASTMSANQPTQVTLITTPSGVEAQPVQDLPVSFLASPTSEQPSSTEVGDVPG
TVTMVCSNPPCETHETGTTNTTTTASSDIGGVQRVCSNPPCETHETGTTNTTTTASTNMG
GAMRTTTSSSPGTATGNQGPENLSTGTTFTPTTACSNMGSAQTGTVQSSKPAVGSTMCLI
PPCETHETGTTNTATQSLSSMGNGQTGTLQRVCSNPPCETHETGTTSTPSQASSNMAGNQ
TGTAQRVCSNPPCETHETGTTNTATTATADGADSATSSTETPSTTASETTPATIQSRAIT
TVTQSTPAPGPSVPSILSITEGAAGSTEEPMQTDAATEGGETAMETGLSPELSEGQMGTG
LSAEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDSGSTGQQAITIPIVL
TQQELAALVQQQHQLQEAQAQAQAQQQGNAQALPTEGLAPADSLNDPASESNGHPEMAAA
VSSAVASLLPRTSTETLAPSSTFSVASPAKLQAAVAEVANGIEGGKLNPQPAPIKTLVKK
ENQWFDVGIVKVTNMVVTHFFIPEDDSQVEDDSGAIPDYNQMKKMELQPGTAYKFRVSCI
NACGRGFFSEISAFXTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAI
QSTQTAEPKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKG
YGPATQVRWLQESSKDGASAKLAPKRPVSSPDAKAACQKKARTDP
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgactggttcagctctacagccacgatggaagcgggtactgggatggtctggccctgtc
cctcggcccagacatggtcacagagccgttgctataaaggaattgatggttgtttttgga
ggaggaaatgaaggaattgtggatgagttgcatgtctacaacacagcaacaaaccaatgg
tttatccctgcggttcgtggtgatattccccctggatgtgctgcatatggttttgtttgt
gatggcacccggcttctggtgtttggtggaatggtggaatatggaaaatacagcaatgat
ctctatgagctacaggccagcagatgggaatggaaaaagttgaaagctaagactcccaaa
aatggcnccaccccctgtcctcgacttggccacagtttctcgctggtgggtaacaagtgc
tacttgtttggaggactggctaatgacagcgaggaccccaaaaacaacatccccagatac
ctgaatgatctgtacaccctggagcttcgtgctggctccagtgttgtgggctgggatata
ccaattacttatggtgttttgccacctcctcgcgagagccacactgccgtagtgtacaca
gaaaaggacagcaagaaatctcgcctgatcatctatggagggatgagtggctgtcgtcta
ggagatctatggacacttgacatcgacaccctgacctggactaagccttcagtgaatggc
acagcacctctgcccaggagtcttcactctgccaccaccatcacaaacaagatgtttgtg
tttggggggtgggttcccctggttatggatgatgtgaaggtggccacacatgagaaggaa
tggaagtgcacaaacacactggcctgcctaaatcttgactccatggcctgggaatcagtg
gtgatggatactctggaggacaatatcccaagggcccgggcaggacattgctctgtggcc
atcaactctaggttgtatgtctggagtggccgtgacggttaccgtaaagcatggaacaac
caagtctgctgtaaagacctctggtaccttgaaacagagaggccacacgctccctcgaga
gtgcagctagtccgtgccaacaccaactccctggaggtaagctggggcgctgtgtccact
gcagacacctatctgctgcagctacaaaagtacgacattcctgctgccactgctgtgacc
tcgccggccctcaatgccgccacctctctgcaagggaacttgcctaagggcccagccaca
gctgctccctctgctcagaacctaccacacacaggtatcactattgtgccccaggcttct
tcccctacaatccttcccaacattcccagaagcccgctggctgcctccacagctcatggg
ccagctatcttgaaggttgcagcgcctccgtctggcacgggtacctcccttgtcactgtg
cgacccaaccaggctgggaaatcccctgtcactgtgacatcacttcttccaggagttcgc
atggttgttcctgcccagaccgcccaaggaacaccagtcggcagcagccctcagatgagt
ggcatggcagctttggctgcagctgcagcagccacacagaagatcccaccctcttcaagc
actgtactcaacattccagcaggtgccacccttgtcaaaaccatggctggctccaccaca
gtcaaaatggcatctcctctcatggttagtaacccagccactcgcatgctgaagacagct
gcagctcaggtgggcacagcgaccgtatcgtcacccaactcgcccaacagacctatcatc
actgtgcacaagtcgggcacggttaccgtagcccagcaacaccaggtggttaccaccatg
gtgggaggagtcaccaagaccatcaccctggtcaagagccccctcacaatgggaggcagc
ggcactttgcagatctccaaccttggcaagatgatgtctgtggtacaaaccaagccagtg
cagacatcggctgttacaggccaggcttccactaaccctctcacacagttcatacagacc
aagggttctctccctgccggcaccatactgaagctggtgacctcagcggacggcaagccc
accaccatcatcaccacatcccaggcgggaggaactgggaacaaacccaccatcctgaac
atcagcggcatgtcgcccaccacaaccaaacagggtaccaccatcatcaagaccatccct
atgtctgctattatgacccagcctggagccacagtgaccagcagcacagggaagacgccc
tataccatcatcagcaccaagatgatgaccactggcactccaggcaaaatcatcactacc
atgcccaagcttggcactgcaactggccagcaagcgctgacacaggtggttttgaaggga
gccccgggccaacctggcaccattctgcgcactgtacccatgggtggagtcagactcgtc
accccagtcacgatgtcttctgtcaagcccaatataactacactggtcgtcaagggaaca
actggtgtcaccaccctggggactgtcacagggacagtctcctccagtctggcagggagc
attgtagccagttccaatgcctctctggcaactccaatcaccacccttggcaccatcgcc
accctgtccagccaagttatcaaccccactgccatcactgtgtcagcagcccagaccagt
ctgaccacagctactaccctttccgcttccaccatgtcagcaaaccagcctacccaggtg
actctcatcaccacccccagcggggttgaggcccagccagtgcaggacctgcctgtgtcc
ttcctggcctcccccacctctgagcagccctcttccactgaggtcggggatgtccctggc
actgtcaccatggtctgctccaaccccccctgtgagacccacgaaacaggaaccaccaac
accacaaccacagcctcctccgatataggtggggtgcagagggtctgctccaaccccccc
tgtgagacccacgagacgggcaccaccaacaccacaacgaccgcctccaccaacatgggc
ggggcaatgaggacgaccacctcttcttcccccggaaccgccacaggcaaccagggacca
gagaacctgagcaccggcaccacattcacccccaccacggcatgctccaacatgggctca
gcccaaaccggaactgtgcagagttccaagccagccgtgggctctacgatgtgcttaatc
ccaccctgcgagacacatgaaacaggcacaaccaacactgccactcagtccttgtccagc
atgggtaatgggcagactggcactctacagagggtgtgctcaaacccaccctgcgagact
cacgaaactgggaccaccagcaccccgtcccaggccagctcaaacatggccgggaaccag
acagggacggcgcagagggtgtgttccaaccccccctgtgaaacccacgagactggcacc
accaacacggcaactactgccacagcagatggagcagacagtgccaccagcagtacagag
actccttccaccactgcatcagaaacaaccccagccaccatccagagcagagccatcact
actgtgactcagtccacaccagccccggggccctcagtaccttccattttgtcgatcact
gagggtgctgctggttccacagaagagcccatgcagacagacgcggccacggagggggga
gagacagctatggagactgggctgtccccagagctgtcagagggacagatggggacaggt
ctgtctgcagaggagctggctgtgaccgcagcggcggaggcagcggcgcaggctgcagcc
acagaggaggcccaggccctggccattcaggcagtcctccaggcagcacagcaggcagtc
atgaacgagggtgattctggctcgaccggacagcaggccatcacaatccccatcgtcctg
acccagcaggagttggcagccttggtccagcagcagcaccagctccaggaggctcaggct
caggcccaggcccagcagcaaggaaatgcccaggccctacccactgagggccttgccccc
gcagacagcctcaacgaccctgcgtctgagagcaacggacaccccgagatggctgcagct
gtctccagcgctgtggcatcactgctgccgcgcacatccactgagaccctggccccctca
agcacattttctgttgccagtccagccaagctgcaagctgctgtagcagaggtggccaat
ggcattgagggtgggaagctaaaccctcaaccagcccctatcaagactcttgtaaaaaaa
gagaaccagtggtttgacgttggcatcgtcaaggtgacaaacatggtggttacgcacttc
ttcatcccagaggacgattctcaagtggaggatgactcgggtgccatcccagactataac
cagatgaagaaaatggagctgcagcctggcacagcctacaagttccgtgtctcttgtatc
aacgcttgtggtcgtggtttcttctcagagatatctgcttttnaaacctgtttaccaggc
ttccctggagcaccttgtgccatcaaaatcagcaagagcccagatggtgcccacctcacc
tgggagcctccctctgtgacatcagggaagatcattgagtactctgtgtacctggccatc
cagagcacccagacagctgagcccaaagcctccaccccagcccagctggccttcatgcga
gtgtactgtgggcccaacccctcctgcttggtgcagtcctccagcctctccaatgcccac
atagactacaccaccaagcctgccatcatcttccgcatagctgcgcgcaacgagaagggc
tatggccctgccacacaagtccgatggctgcaagagtccagcaaagatggagcctcggca
aaacttgccccaaaaagacccgtttcctcgcctgatgctaaggctgcttgtcaaaaaaaa
gcaagaacggacccgtga
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