Oncorhynchus masou masou (cherry salmon): 135542164
Help
Entry
135542164 CDS
T10723
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135542164 (shq1)
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
135542164 (shq1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
135542164
NCBI-ProteinID:
XP_064824962
LinkDB
All DBs
Position
6:complement(47887089..47929891)
Genome browser
AA seq
610 aa
AA seq
DB search
MITPAFELSQDPTFLILTIRVPYTRTSEFDLYIDGDDFKFYAKPYFLRLTLPGKIVEDGR
EKATFDIDKGLFTLHVPKETAGEHFEGLQMLTSLLAPKGSRSAKPLVEDMGACSGIMDGE
EEDDEEEFDWQVEQEVYMDTSEEQLKELQKYGFGSQRSGVFTRLQEELSDVIDIQNPDRT
TVSERRRKRLDAETSIFCPDHYLADLFEDEEIQGLLKFRPWWSDLCPDSIRQGEAAVSFT
DDEKEQLRKFTNRSYILDKKSRFQVWLSLVDIILAYCYELRTTEGEHNVESPWTIRKLSG
TLCWLETYSSLQEVLVSFGRRVLCYPLYRHFSLVSAAVQDAARVFQSGKACVLKCLLDIH
KVFRENEPAYILNDLYITDYCVWLQRVKSRKVTALADPLRNVSLRKRDLDLELEVLETAA
TLVEEEEKVEDRGKSPIRTPLSHIREESDSNDSSSDSSEESEDSEAEGKDCADRTEGGGE
RAKAIPIHPQPAAPPIHQESGAVLTSSERKPSTPPSAVSCPRQLIQELGEMVEEGLWISA
QPQGSRHSRSSAQGEAERDCSQPATATATATDTARTGAFLELNPRRNPLLIVKTDTGDDL
DEDDIDEDDY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgattactccagcgtttgagttgagccaggacccaactttcctaatcctgaccatccgt
gtgccctacacgagaacatcagagtttgatctctacatcgatggagatgatttcaaattc
tatgccaagccttacttcctcagactgaccttacctggaaagatagtggaggatgggagg
gaaaaggccactttcgacattgataaaggtctttttaccctgcacgtccccaaggagaca
gcaggggaacactttgaagggctccagatgctgaccagtctcctggctcccaaaggctcc
cgctcagccaagcctctggtggaagacatgggagcgtgcagtggtattatggacggtgag
gaagaggatgacgaagaggagtttgactggcaggttgagcaggaggtgtacatggacacc
tcagaggagcagctgaaggaactgcagaagtatggctttgggagtcagaggtccggagtg
ttcactcgactgcaggaggagctgagtgatgtcatcgacatccaaaacccagatagaacc
acagtgtcagagaggagaaggaaacgactggacgctgagacgtccatattctgccctgac
cattaccttgctgacttgtttgaggacgaggagatccagggtctgctgaagttccgccct
tggtggtctgatctgtgcccagactccatccggcagggagaggcagcggtgtccttcact
gatgatgagaaggagcagctaagaaagtttaccaaccgttcctacatcctggacaagaag
tcccgtttccaggtgtggctcagcctggtggacatcatcctggcatactgctacgaattg
cgcactacagagggagagcacaacgttgaatcaccgtggaccatcagaaaactaagtggg
actctctgctggcttgagacatacagctcgctgcaggaggtcttggtgtcctttgggagg
agggtgttgtgttacccgctctacaggcacttttctctggtctctgcagccgtgcaggat
gcggctcgggtcttccagtcagggaaagcctgcgtcctgaagtgcttgttggatattcac
aaagtcttccgggagaatgaaccggcctacatattgaacgacctctacatcacagactac
tgcgtctggctccagagggtcaagtccaggaaggtgacagctttggccgatcccttacgg
aatgtatccctacggaaaagagacctggatttggagttggaggtgctggagacggcagca
acgctggtagaggaagaagagaaggtggaggacagggggaaaagccccattagaactcct
ctgtcacacatcagagaggagtctgacagcaacgacagtagcagcgactcgtctgaggag
agtgaggactctgaagctgaagggaaggactgtgctgacagaacagagggaggaggagag
agagccaaggccatccccatacatccccagcctgctgcccctcccatccaccaggagtcc
ggtgctgttctcacatcatccgagaggaagcccagcacccccccatctgctgtgtcctgc
cccagacagctgatccaggagctgggagagatggtggaggaggggctctggatttcagca
cagcctcagggcagcaggcattccaggagcagtgcacagggagaggcagagagagactgt
tcacagcctgcgactgccacagccactgcaacagatactgcccgcacaggggctttccta
gagctgaatcctcgcagaaaccctcttctgattgtcaaaacagatactggtgatgatctt
gatgaggatgatatcgatgaggatgactattag
DBGET
integrated database retrieval system
