Oncorhynchus masou masou (cherry salmon): 135542170
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Entry
135542170 CDS
T10723
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135542170 (chl1b)
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
L1 family
135542170 (chl1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_5
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_4
Pur_ac_phosph_N
Ig_6
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
135542170
NCBI-ProteinID:
XP_064824974
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All DBs
Position
6:48403408..48478759
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AA seq
1278 aa
AA seq
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MNSEMVVCCGAMRMRSSMWSPGLALLTGVVVSVCAFHLTTAIDIPLEVLGHVNIEQLPTI
TEASPSSLIAFPFDESFPMTCEAKGNPKPEYRWTKNGEEFDPYQDPRLIKEDNSGTFVIP
NTGNLTEYQGTYRCYAESVLGTAITEEIEFVVPHVPKFPKEKIDPIKVEEGHPVILECNP
PKGIPPLQIYWMTIDLQHIEQDERVSMGLNGDLFFSNALEKDSRRDYCCFAAFPRIRTIV
QKNAMSVIVKSKNSNSDSSSSPGRANSILERKPSLLMPSGVKSETQLVKGDELLLECIAE
GFPTPKIEWVRMGHRLPDRATIENHGKLLSIDRVNEDDSGKYMCKAKNIHGEANHSFDVS
VEEPPKWVSEPESQLSTIGSDVHIKCSATGTPQPTIQWRVNGKPLKEVPASNRKVLDDTI
VLHNAKSIDSAVYQCEASNRHGTLLANANIMIMNLPPMVLTEEGLEYSAVEGKSVVMHCK
VFSSPPSIVTWNKDDSTGSVEGPRFTVHQNGSLEIHNVEKEDMGQYTCYTKNTEGKSAIT
ALLDVKDPTKIFQAPEDLQVLIGTTAQLSCLAVYDISFSGDFEIVWEKDDMEIALNHTEN
SGYFLEDGILQIVNVSHRDQGVYKCVARTPVDQDTASALLIVLDVPDAPENLVLSEHKGR
SVKLKWIPGDDHNSSTTDFIIEYEESQWEPGNWNELQRVPGNHGSAVLKLYGHVDYRFRV
SGVNAVGRGRPSEPTERYKTPPAAPDKNPENIKIEGHLAHEMDINWEPLSPIEHNGPGLE
YKVSYKRQDVEEDWHEHVVKRHSFVVKGTPTFVPYEVRIQARNYQGWGPEPKVMTGYSGE
DFPSAAPDDVEVEVMNNSLVKVSWTRVHKEKLHGHLGGYRINWWRLRSLLDSKKTHGNKH
TLTFPGDRNHAMVPGLAPFSEYSLIVMTFNGRGNGPGSHAVNFKTPEGVPEENPVFRVTD
VQKHTVALTWAPPLVANGVVTGYRLEYQLINDTEEVGVLQSMDISSPDTTSCVLRNLEAV
SRYKFYLRSCTRVGCGPQVSEESTTTPVALPALLNISSSVSDNFANISWIPGSEQTDSEF
YVAYVNNRKGNWKISEAVNTSKTFHIIEGLEPGTAYTVRLMTNNWVDNSSIFEDVIRTRD
KGLASIHGGISTQGWFIGLMCAVAVLTLIVLIACFVNRNKGGKYAVKEKEDLHPDLESQG
MHDDTFCEYSDNDEKPLKGSQHSLSGQIKAEDSGDSLVDYGDEDAQFNEDGSFIGEYAGR
KEKRVSMEVKGTTNQSKA
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgagatggttgtctgctgtggcgcgatgaggatgaggtcatcgatgtggagc
ccaggattggctctcctgacgggcgtggtcgtcagtgtctgtgcctttcacctcaccact
gccattgacatcccattggaggttttaggtcatgtaaacattgagcagctgcccaccatc
acagaggcctcccccagctctctgatcgccttccccttcgatgagagcttccccatgacg
tgtgaagccaaagggaatcccaagccagaataccggtggacaaaaaatggggaagagttt
gacccctaccaggacccgaggctgatcaaggaggacaactctgggacgtttgtgatcccc
aacactgggaatctcacagaataccagggaacgtaccgctgttacgccgagagcgtatta
gggacggccataacggaggagattgagtttgttgtgccccacgttcctaagtttcccaag
gagaagattgatcccatcaaggtggaggagggtcaccctgtcattttggagtgtaaccct
cctaaaggaatccctcctttacagatctactggatgaccatcgaccttcagcacatagag
caggatgagagggtgtccatgggtctgaacggtgacctgttcttctctaatgctctggag
aaggacagccgcagagactactgttgcttcgccgccttccccaggatacgcaccatcgta
cagaagaatgccatgtcggtcatagtcaagagcaaaaattcaaacagtgactcaagtagc
agtcctggtcgtgccaattcaatcctggagagaaaaccaagccttctgatgccctctggt
gtcaagtcggagacacagctggtgaaaggtgacgagctactactggagtgcattgccgag
ggctttccaacacccaagattgaatgggtaaggatgggccacaggctgcccgacagagcg
acgatagagaaccatgggaaactcctgagcattgaccgggtcaatgaggacgacagtggg
aaatacatgtgtaaggctaagaacatccacggagaggccaaccactcctttgatgtatca
gtggaagagcctcctaagtgggtatctgagcctgagagccagcttagtacgattggctca
gacgtgcatatcaagtgctctgccactggcactcctcagcccaccatccaatggagggtg
aatggaaaacctcttaaggaggtcccagcatcgaacagaaaagtgttggacgacaccatt
gtcttgcacaacgccaaatcgattgacagtgccgtctatcaatgtgaggcttccaacaga
catggaaccctactggccaatgccaatatcatgatcatgaatctgcctcctatggtcctg
acagaggaaggtctggagtattcagctgtggagggaaagagtgtagtcatgcactgcaag
gtgttcagctctccgccctctattgtaacctggaacaaggatgactcaacagggtctgtg
gagggaccaaggtttacagttcaccagaatggatctttggagatccataatgtggagaaa
gaggacatgggccaatacacatgttacaccaagaatactgaagggaagtctgctataact
gccttactggatgttaaagatcccacaaagatattccaggccccagaggacttgcaggtc
ctaataggaaccacagcccagctctcctgcctggcggtgtacgacatctccttcagtggc
gactttgagatcgtgtgggagaaagacgatatggagatagcactaaaccacactgagaat
tctggatatttcttagaggatggcatactgcagatcgtcaacgtcagccacagagaccag
ggcgtgtacaagtgtgtggccagaactccagtggaccaggacactgcctctgcactactc
atagtgctggatgtccccgatgcacctgagaacttggtgctgtctgaacacaagggcaga
agtgtgaagctcaaatggatccctggggatgaccacaacagctcaaccactgacttcatt
attgagtatgaggagagccagtgggagccagggaactggaacgagcttcagagagttcca
ggaaatcacggttcggcagtcctcaaactttatggacatgttgactatcgctttcgagtg
tctggagtcaacgcggtgggtagggggcgtcccagtgagcccacagaaagatacaagacc
cctcctgcagcccctgacaagaaccctgaaaatattaaaatcgaaggtcatttggcacat
gaaatggatatcaactgggagccattgtcccccattgaacacaatgggccaggccttgaa
tacaaggtgagctataaacggcaggatgtggaggaggactggcacgagcatgtggtgaaa
agacactcgtttgtggtgaagggcactcccacgttcgtgccctatgaggtcaggatccag
gcgaggaactaccagggatggggacctgaacccaaagtgatgactggctactctggagag
gactttccctccgcggcccctgatgatgtggaggtggaggtgatgaacaactcgctggtc
aaggtcagctggacgcgcgttcacaaggaaaagctgcatggacatctgggaggctacagg
ataaactggtggcggctgcgtagtctgctggactcaaagaagactcacgggaacaaacac
acgctgacattcccgggggacaggaaccatgccatggtaccagggctcgcgcccttctct
gagtacagcctcatcgtcatgaccttcaacgggcgaggcaacgggccaggcagccacgcc
gtcaacttcaaaactcccgagggagttccagaggaaaacccggttttcagggtcacagat
gttcagaagcacaccgtcgctctcacctgggcacctcctctggttgccaatggagtcgtc
acaggataccggctagagtatcagctaatcaacgacacagaggaggtgggtgtcctgcag
tcgatggacatcagcagcccggacaccacctcgtgtgtcctgcggaacctcgaggccgtc
agcaggtacaagttctacctgcgctcctgcaccagggtgggctgtgggccccaggtcagc
gaggagagcaccaccacacctgtagcgctcccagccctgttgaatattagttcctcagtt
agtgacaactttgcaaatatcagctggattccgggaagcgagcaaaccgattcagagttt
tatgttgcatatgtgaacaaccgtaaaggtaactggaagatctctgaggcagtaaacacc
tctaagactttccacatcattgaggggctggagcctgggactgcgtacactgtgcgcctt
atgactaacaactgggttgataattctagtatttttgaagatgtaatcaggaccagggat
aaaggtctggcaagcatccatggaggaatctccacccagggctggttcatcgggctgatg
tgtgccgtggctgtcctcacactcattgtgttaatcgcctgctttgtcaacagaaataaa
ggagggaaatatgctgtaaaggagaaagaggacctccacccagaccttgaatcccagggt
atgcatgatgacaccttctgtgaatacagtgacaacgatgagaagccactgaagggcagc
cagcactctctgagcggacagatcaaagcagaggacagtggggacagcctggtggactat
ggggatgaggacgcccagttcaacgaggatggctcctttatcggcgaatacgctggacgc
aaggagaaaagggtgtccatggaagtcaaaggaaccaccaatcagagcaaagcgtaa
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