Oncorhynchus masou masou (cherry salmon): 135542171
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Entry
135542171 CDS
T10723
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135542171
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omm00537
]
135542171
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Contactins
135542171
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omm00537
]
Others
135542171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Sp38
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Antimicrobial10
Motif
Other DBs
NCBI-GeneID:
135542171
NCBI-ProteinID:
XP_064824986
LinkDB
All DBs
Position
6:48557882..48674225
Genome browser
AA seq
1022 aa
AA seq
DB search
MKMLLPWELLILLSLTDCLAERSARHGPVFTQEPSDSVFPLRSEDNKVFINCKAKGNPVP
HYKWKVDGGYIDMDLNYNLVEGNLLINHPHATHHGGVYQCIATNVFGTIVSREAKVQFAY
LQNFSRKSRNTVSVREGQAVVLLCGPPPHNGEIKYSWVFNGRPSFLLQDTRRFVSQRTGN
LYIAKVEASDVGNYTCVVRNMMTNATAYSSPTPVVLRRDAVMGEYEPKIEVQFPESLHVT
KGSSVKLECFALGNPVPSITWRRTDGNPLPGKIKINHSNGVLEIPYFRPEDAGVYECVAE
NSRGRNVAKGQLVFQSVEHLHWVQTLKDVHMAIEANLQWECKASGKPKPVYRWLKNGEPL
VLEDRILVEGGRLAIPRINLLDSGMYQCLAENEHGAIYASAELKVVASSPDFSSSPVKKS
MLIQRGGEVIMECRPHASPRASISWRRGGEFLKDSTRRTIMGDGTLRISNISESDGGRYT
CVARNPFGTSSSTGTLVVKEPTKITVPPLSVDATVGESIVLPCEVSGDSSLDPTFKWFFN
GKLIDFNRQDHFEMIGVGSAGDLMVRNIQLKHSGKYVCMVHTVVDSVSAAAHLIVRGPPG
APEGLIVGEITDSTAQLSWESGPDHHSPVTTYSIQARTPFSIGWQAVRTVPDSVPGQMFH
ATVIDLNPWVDYEFRVVASNNVGVGEPSIQSKQIRTKAAVPEVAPGNVSGGGGRRGELVI
QWEPIPEELQSGEEFGYVVAFRPLGTSTWKQTVLASPDASRYTFRNDSVPPLSQFEVKVG
VYNNKGEGPSSHVVVVYSAEEEPSEPPSRVWTRTLSASEIEVYWEPITKTASSWKIIGYE
VLCWEEGMQESDAEMVRVTDTAALLSGLKGSTVYLISVRAQNSAGAGPSSPAVNVTTKKP
PPSQPPGNIEWNLTDSKIFLSWEHVKAMGNESEVTGYKVLYRQNWLGKTSVVETNRTSMA
LQVPSGEDYLIEIKALSDGGDGSSSGPIRIPKMSSLNSNGHFSSAPCKICAVVFFILSKL
TL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttgttgccatgggaactgttaatccttctgtcactcacggactgccttgct
gagagaagcgcacgccatggacctgtcttcactcaagaaccaagtgacagcgttttcccc
ctgaggtctgaggacaacaaggtgttcatcaattgtaaagcaaaagggaacccagtccca
cattataaatggaaggttgatgggggatatattgacatggatttgaactacaacctggtt
gaaggaaacctgttgatcaatcacccccatgcaacacatcacgggggcgtttaccagtgt
attgctaccaacgtctttgggaccatcgtcagcagggaggccaaggttcagtttgcatat
ctgcagaacttcagcagaaagtccaggaacacagtgtcagtgagagaaggccaggctgtg
gtgctgctatgtggccctccaccccataatggagagatcaaatactcgtgggttttcaac
ggacgcccaagtttcctgctgcaggatacccgtcgcttcgtctcccagaggaccggcaac
ctgtacatcgccaaggtggaggcctccgatgtggggaactacacgtgtgtggtgaggaac
atgatgaccaacgccaccgcgtacagctcgcccacccccgtggtgctgcgcagggacgct
gtaatgggagagtatgagccaaagattgaagttcagttccccgaaagtcttcatgtcacc
aaaggatcatcagtgaaactggaatgtttcgccttaggaaacccagtgccttccatcaca
tggaggagaacagatgggaatcccctccctggcaagatcaaaatcaatcattccaacggg
gtcctggaaataccatatttcagaccggaggatgctggtgtatatgagtgtgttgcagag
aactccagaggaagaaatgttgccaaaggacaactcgtattccagagtgttgaacatctg
cattgggtccagacgttgaaagatgttcatatggccatcgaggctaatctccagtgggag
tgcaaggcgagcggtaagcctaaacctgtgtacagatggctgaagaacggggagcccttg
gtgctggaggacaggatactggtagaaggtgggcgattggccatccccaggatcaacctg
ttggactctggtatgtaccagtgtctggcagagaacgaacatggcgccatctatgccagc
gccgaactcaaagttgtagcctcttcacccgacttctccagcagtcctgtgaagaagtcc
atgctgatccagagagggggggaggtgatcatggagtgccgtccccatgcgtccccaagg
gcctccatctcctggcggagagggggagagtttctgaaggacagcacaagacggaccatc
atgggggatggaactctccgtatcagcaacatcagcgaatcagatggagggaggtacacc
tgtgtggccaggaacccctttgggacatcaagcagtactggtactctggtggtgaaagag
ccaaccaagataacagttccaccgctgagtgtggatgccactgtgggagagagcatcgtg
ttgccatgtgaagtgtctggagactcctccctggatcccacctttaagtggttcttcaac
ggcaaactcatcgatttcaacagacaggaccactttgagatgataggagtgggatcggct
ggtgatctgatggtcaggaatattcagctaaagcattctgggaagtatgtgtgcatggta
cacactgtggtggacagtgtctcagcagcagcccacctgattgttagagggcctcccggt
gccccagagggccttattgtgggggaaatcactgactccactgcccagctctcctgggag
tctgggcctgaccaccacagccctgtcaccacatacagcatccaggccaggacccccttc
tccataggctggcaggccgtcaggacagttcctgattctgtgcctggacagatgtttcat
gcaacggtgatagatttgaacccctgggtggattacgaattcagggtggtggctagcaac
aatgtgggtgttggagagcccagcatccaatccaagcagattcgaacaaaagcggcagtt
cctgaagtagcaccaggtaatgtgagtggaggaggaggaaggcggggagaactggttatc
caatgggagccaataccagaggagctacagagtggagaggaatttggatacgttgtggct
tttcgtcctcttggtacaagcacatggaagcagactgtgctggcttcacctgatgcatcg
agatacaccttcaggaacgacagcgtccctcccctctcccaatttgaggtgaaagttgga
gtctacaacaacaaaggagaaggcccgtctagccatgtggttgtagtgtattccgcagag
gaagagccctctgaacccccgtccagagtgtggacccggacgctgtcagcctctgaaatc
gaggtgtactgggaacccattaccaagacagccagcagttggaagatcattggatatgag
gtcctttgttgggaggaggggatgcaggagagtgatgctgagatggtgagggtcacagac
actgcagcccttctctctgggctcaagggcagtactgtgtatctgatctcagtcagggcc
cagaacagcgctggagcagggccttctagccccgcagtcaacgtcaccaccaagaaacca
ccaccaagtcaacctccagggaatattgagtggaacttgacagactccaagatctttttg
agttgggaacatgtcaaggcaatgggaaatgagtctgaggtgacaggatacaaagtgctg
taccgtcagaactggcttgggaagaccagcgttgtggagaccaacaggaccagcatggca
ctgcaggtcccctctggtgaagactacctcattgagatcaaagccctgagtgatggaggg
gatggcagcagcagtggccccatcaggataccaaagatgtccagtcttaactcaaacggc
catttcagctcagctccatgcaagatttgtgcagttgtgttttttatactttcaaagttg
actttataa
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