Oncorhynchus masou masou (cherry salmon): 135542179
Help
Entry
135542179 CDS
T10723
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omm03037
]
135542179 (ift52)
Cilium and associated proteins [BR:
omm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
135542179 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
Motif
Other DBs
NCBI-GeneID:
135542179
NCBI-ProteinID:
XP_064825011
LinkDB
All DBs
Position
6:complement(49240413..49245635)
Genome browser
AA seq
434 aa
AA seq
DB search
MEKEQRSSVVFNASKRELFTANNGYKSLQKRLRAQWKIQSMKEELSLEKLNGVKLWITAG
PREKFTAAELEVLKQYLDGGGDVLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDESVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFYHVKEAGKLAVMGSCHMFSDQYLDKEENSKIMDVVFQWLM
GDNIILNQIDAEDPEITDYTMLPDTGCLSERLRVCLQEGEENPRDFTSLFDMSLLKLSTN
TLPQVISSYKQMNVKHEPLQLITPQFETPLPQLEPAVFPPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKDQRDAKHILEHIFFQVVEFKKLN
QEHDLDTETRFSPF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagcagcgcagcagtgttgtttttaacgcatccaagagagaactgttcact
gccaacaatggttacaagtccctgcagaagagactcagggcacaatggaagattcagagc
atgaaagaggagctctccttggagaagttgaatggtgtgaagttgtggattactgctggc
cccagggaaaagttcactgcagctgagttggaggtcctgaagcagtacctggatggggga
ggagatgtccttgtgatgctgggtgaaggaggggagatgaagtatgacaccaatatcaac
ttcctccttgaggagtttgggataatggtcaacaatgatgctgtcgtgaggaatgtttac
tacaagtatttccatccaaaagaagcacttgtgtccaatggtgttctgaacagagagatc
agtcgggctgcaggcaaagtggtgacagggatcatcgaagatgaaagtgtcgggaacaat
gcacaggccctcacatttgtgtacccgtatggagcgacactgagcgtgatgaagcctgct
gtggctgttctctccactgggtccgtctgcttccccctcaacaggcctgtcctcgccttc
tatcacgtcaaggaggcaggcaaattggcagtgatggggtcctgtcacatgttcagtgac
cagtacctggacaaagaggagaacagtaaaataatggatgttgttttccagtggctcatg
ggtgataacattattctgaaccagatagatgcagaggaccccgagatcacagattacacc
atgctgccagacacaggctgcctgtctgagcgactgcgagtatgcttgcaagagggagag
gaaaatccaagagactttacctccctgtttgacatgtctctactcaaactatcaacaaac
acgttgccccaagtcatcagttcctacaagcagatgaatgtcaaacacgagcctctccag
ctgatcacacctcagtttgagactccccttccacagctggagcctgctgtcttcccgcct
gccttcagggatctgcctccccccatgcttgacctctttgacctggatgaaaccttctct
tctgagaaggtgcgtttggcacagctctccaacaaatgcacagacgatgatctagagttc
tacgtgaggaagtgtggtgacatcttgggggtgacggggaagttggataaagatcagagg
gatgccaaacacatcctggagcacatcttcttccaggtcgtggagttcaagaagctcaat
caggaacatgatcttgacacagagaccaggttttccccgttctga
DBGET
integrated database retrieval system
