Oncorhynchus masou masou (cherry salmon): 135542358
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Entry
135542358 CDS
T10723
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
General mRNP proteins
135542358 (rbm39a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
PRP38_assoc
CDC45
Motif
Other DBs
NCBI-GeneID:
135542358
NCBI-ProteinID:
XP_064825342
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Position
6:complement(59201215..59246593)
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AA seq
534 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKHSSPNGHKEHSKKKKKSRSRSRDRKRSKSRDRKKSHDHK
RSRSHERKQSRSRERRRSRERSGHYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRRRSRS
RSPLKKEKSPVRQVFLGEMTQKSSIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFF
SAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAE
KNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSK
GYGFITFSDTECAKKALDQLNGFELAGRPMKVGHVTERTDASNASSFLDNDELERTGIDL
GTTGRLQLMARLAEGTGLQIPPAAQQALQMGGAIAIGAMAAVSAAMNPAMNMNMNTAMNL
PSQPLATHCFQLSNMFNPRSEDNPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYV
KCPSVPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVKATQLLIPLTH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacatagaagcaatgctcgaggctccatatcgaaaggatgagatc
aagcacagtagtccaaatgggcacaaggaacacagcaagaagaaaaaaaagagcaggagt
cgaagcagagacaggaagaggagcaaaagccgggatcgcaagaagagccatgaccacaag
cggagccgcagccacgagcgaaagcagagccgcagcagggagaggcgccggagcagagag
cgcagcggccactacagggatcacaagaccaccttctctgggccgaaatttaatggtggt
tccagagggaagattggccccccacctgtcatcaagctaagccgaagacgttccagaagc
cgaagccctttgaagaaagagaagagtcctgtgaggcaagtgttccttggggagatgacg
caaaagagctcaatcaggcagccaatagacaacctgactccagaggaaagggacgctcgc
acagtgttctgcatgcagctggcagccagaatccgaccacgtgacctggaggagttcttc
tctgcagtgggaaaggtgagagatgtgcgcatgatctctgacagaaattcgaggaggtcg
aaggggattgcttacatcgagtttgtggaggccaactcggtgccactggctataggattg
tctggccagcgacttctgggggtgccaataattgttcaggcctcacaggtaatggctgag
aaaaacagggctgctgccatggccaacaacctgcagaagggcaacgctggcccgatgaga
ctctacgtcggatccttacactttaacatcacagaggagatgctacgaggaatatttgag
ccctttggaaagattgagagtattcagctcatgatggatagtgagacggggagatccaaa
ggatatggcttcatcactttctcagacacagagtgtgccaagaaggctttggatcagttg
aacggctttgagctggctggccggccgatgaaggtgggccatgtgactgagcgcacagac
gcctccaacgccagctccttcctggacaacgacgagctggagaggacaggcatcgacctg
ggcactactgggcgcctgcagctcatggccagactggctgaaggcacgggactgcagatt
cccccagcagcacagcaagccctgcagatgggtggggccattgctattggtgccatggcc
gctgtatcagctgccatgaatcctgccatgaatatgaacatgaatacagctatgaaccta
ccctcacagccacttgctacacactgtttccagctctctaacatgttcaaccctcggtct
gaagataacccaggctgggatgttgacattcagcatgatgtcattgaggaatgcaacaaa
catggaggagttgtgcacatatacgttgacaagaattccactgaaggcaacgtgtatgtg
aaatgtccatccgttcctgctgccatggctgcagtaaacgcattacatggtcgatatttt
gcaggtaaaatgatcacagcggcatacgtccctctcccaacatatcacaaccttttccct
gactctgtgaaggctacccagctcctgatccctcttactcactga
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