Oncorhynchus masou masou (cherry salmon): 135542362
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Entry
135542362 CDS
T10723
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135542362
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135542362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Chromo_MIT1
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
135542362
NCBI-ProteinID:
XP_064825353
LinkDB
All DBs
Position
6:59461314..59520596
Genome browser
AA seq
2757 aa
AA seq
DB search
MPPLPPVTGAPEDEANIIEKILSVRTVKKEASPEDTTEESEEFYVKYRNFSYLHCKWATL
EELEKDPRIQQKIKRFRTKHAQMKHIFVEPNEDLFNPDYIEVDRVLEVAITTDTETGEVS
QGEEVTHYLVKWCSLSYEEATWELQEDVDPVKIREFEEIKRIPEFKFVERPQPDKWQKLD
KSKDYRNGNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLFEMFSMGLRG
PFLIIAPLSTITNWEREFRTWTEINVIVYHGSQISRQMIHQYEMYHKDQQGNVVLGGYKF
HGVITTFEMIMADCPELKKIHWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPL
QNSVEELFSLLNFLEPLQFPSESLFLEEFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKN
LAPKEETIIEVELTNMQKKYYRAILEKNFTFLAKGANQHNMPNLINTMMELRKCCNHPYL
IKGAEEKILDSFRKTHSPDAWDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLVFSQMVR
CLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKVDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKA
VLQDINRKGSLNGAQQMTKIEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTI
TIETEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAKITELEIDSKAEKESLVIDTPRV
RKQTRHYNSFEDDELMEFSELDSDSEERPCRTRRFSERNRRYLRAECFRVEKNLLIFGWG
RWKDILTHGRFKWQLAEHDMEVLCRALLVYCVRHYMGDDKIKSFIWDLITPAKDGHKQDL
QNHSGLSAPVPRGRKGKKLKNHLSVPEMKHADWLVNCNPEVVLQDDSYKKHLKQHCNKVL
LRVRMLYYLKAEVLGETAAQSLEGIHASKLEVALPDIDYIEIPAGWWDAEADKSLLLGVH
KHGYERYNAMRADSELCFLERVGMPDVTALSAEQNGGEVVADLTDSACKSDDVKDDPECN
QEEGGVEKVDNKDETSSSNDAMDKHDSVGQDTLSVEMVQETFGQEGMELKGRPLWPVGPA
LTARLRRLITAYQRFMRREPLRHDFLLPEGLGAGLGTMSWQLGEEIRRYTVAAAEPDPLF
LEWQRRWVMMSEQRWTRREQADFYRTVSSFGVVYDPEKKAFDWSPFRSFARLERKTDESL
ERYFSSFVSMCRTACRLPPRKDEGPLDHNLFVEPITEERAARTLYRIELLRKVREQVLRH
PLLGPRLQLCRPSLYLPVWWECGKHDRDLLIGAARHGLSRTDYYILNDPQLSFLEAHRNY
VQKENHQGYQPSVHHAGMAPSPHHHHPCCIYETGLGQCHSPQPPEYGHQAIPSSSIHFHS
HPNVHSHLPEIVGTGLGGSLGMVSGPREGFLVCPPLDESLELASLQHEGLASDSLHGKST
KEAFNGFPFNSAQGGQSMLNSYGVQGELTSEQSADMDPIISGKLRSDVLVGSSEENGLMA
PLLELEQELQVPWESTDHTGTADVVGMFNEADPILGAPALDTEFLDTEEQPGDGGREDGA
VGVLDDCLGIPSSRSDPGEPLPSSFMLFKNIDVSEEEPAAEHTNLSASPLPSYTPPLHLS
LSHMTLHPHHHNQGDVEQPEEKLSDSDTVAHAPSPDEREAERDASFEFDKEEMSVDCPSL
VGLEQGLETSCIPCEDTLQEEPCYGMGMGSPVESCQVALERPGEETLERNTPLGQVAETL
LEGQAEEPLEISPMDSQEKDPVDGPLEYFGKDKALEGPFTGPLEQYDVDPEAAFEGPAEA
ENTLIEHKLPTVDATYTLPPSSSVPRPQPEPPLSPRVAGVSQIKLEFPLDPESSESKSDI
LEPNSTVLTPKLEQTEVLLEVKDKIKEERPQTPVSVVDSYVEVAQFAVPMSMCEMPDSLQ
DAREPTIAQLLQEKALYSFSEWPKDRVIINRLDSICHAILKGKWPSSSQQYDSPSSLANT
CVPNIVHQRAGFISARVQPSQSLNFNIPAPPVTRLPKYKSRDDGECSQGGWRLTSLPLLQ
ERLVAPPYLPELKRGRRAFECKAEVLSKQCHTGENMPVTVSNSGGALLLNGWQEAAMDLS
KTGDQGIGGDAAATVGHMSHQVHPIARKLPAMSAMQGSVGKDMAGILQAGLIHPVTGQIV
NGNLRCDDTIMRRRRGRRRNVEAVDIGFVKSRGMHVQEKQCRVEVTSHSAVSSTSSPPEC
PPGTSTPTLSEVVAIDREAANNGLMEWLRQNPNCSMEVPTFAPSPSSAILHSFVERPKQR
RHRCKDPTKLDVNSLTGEERVPVVHRSTGRRLGGAMAPAIKELSRWLDANTEYCVAPDWA
DVVKHSGFLPEGKFTRILTEPVCRDQGPRRRGRRPRSEMPKPLLSESPMGPLCMNGGLIG
SMDLVGLQDLRNVQGIPLTGLMGFPHGFAVSAGEDAKNGLSMLPMMLHGVHGAPHMFSVQ
GLMGLPPTCSASTSSSTAAVTTTAASSSAASSPSRGPGQASSSTGAEGSGIQSGTERKRE
EKQQGAMGSHSIAAITTTTATSSGSHQAFNPFLIPGMSHGLLYPHMFLPHGGVMALPGMP
PADSSSSPKMKKKRTREEGVVVVVVEAGSHSHLQTDSGPPKKHSDGQTGESTADQAGLKD
REQTEDSIQEEGTGHDSHDPPEVNPKKSVEEERGTMEISLMEEEKLPEEESVSRGAE
NT seq
8274 nt
NT seq
+upstream
nt +downstream
nt
atgccccctctcccccctgtcacaggagcccctgaagatgaggcaaacattattgagaaa
atcctgtcggttcgaactgtgaagaaagaggcgtcccctgaggatacaactgaggagtcg
gaggagttttatgtcaagtacagaaatttctcctacctgcattgtaaatgggcgacattg
gaggagttggagaaggaccctcgcatccagcaaaaaatcaagcgcttcaggactaagcat
gcccaaatgaagcacatatttgttgagccgaatgaagacctctttaaccctgactacata
gaagtggatagagttttggaggtggccatcactacagacacagagacaggagaggtgagc
cagggagaggaggtgacacactacctggtgaagtggtgctccctgtcctatgaggaggct
acatgggagcttcaggaagatgtggacccggtgaagattcgggagtttgaggagatcaag
agaatccctgaattcaaatttgtggaaaggcctcagccagacaagtggcagaagctggac
aaatccaaagactatcgaaacgggaaccagctgagagagtaccagctggagggaatgaat
tggctgctcttcaactggtacaacaggaagaactgcatccttgctgacgagatgggcctt
gggaagaccatccagtccatcaccttcctctttgagatgttctccatgggcctgcgggga
cccttcctcatcatcgcccccctttccaccatcaccaactgggagagggagttccgcacc
tggactgagatcaacgtcattgtctaccacggcagccagatcagccgccagatgatccac
cagtatgagatgtaccacaaggaccagcagggaaatgtagtgttgggcgggtacaagttc
cacggagtgatcaccacctttgagatgatcatggccgactgtccggagctgaagaagatc
cactggcgctgcgtggtcatcgatgaggcccaccgccttaagaaccgcaactgtaaactc
ctggagggcctcaagctcatgaacctggaacacaaggtcctcctgacaggcacccccctg
cagaactcagtggaggagctctttagtctgctcaacttcctggagcccctacagttcccc
tcagagagcctcttcttggaggagtttggagatctgaagactgaggaacaggtgaagaag
cttcaggccatcctaaagcccatgatgctgcggcggctgaaggatgacgtggagaagaac
ctggcgcccaaggaggagaccatcatcgaggtggagctcaccaacatgcagaagaagtac
taccgggccatcctggaaaagaacttcaccttcctggccaagggggccaaccagcacaac
atgcccaacctcatcaacaccatgatggagctgcgcaagtgctgcaaccacccctacctg
atcaaaggtgcggaggagaagatcctggatagcttcagaaaaacgcacagccctgatgct
tgggacttccagctccaggccatgattcaggcagcggggaagctggtgcttattgacaag
ctgctgccgaagctgattgctggcggccacaaggtgctggtcttctcccagatggtgcgc
tgcctggacatcctggaggactacctcatccagaggaggtacacctatgagcgcatcgat
ggcagagtgcggggtaacctgcgccaggcagcgatcgacagattctgtaaggtggactcg
gaccgctttgtgttcctgttgtgtacccgtgctgggggcctgggcatcaacctgaccgct
gcagacacctgcatcatcttcgactcagactggaacccccagaacgacctacaggcccaa
gctcgctgccaccgcatcggccagagtaaagcagtgaaagtgtacaggctgatcaccagg
aactcctatgagagggagatgtttgataaagccagtctgaagctgggtctagacaaggct
gtgctgcaggacattaatcgaaagggcagcctcaatggggcgcagcagatgaccaagatt
gaggtggaggacctgctgaggaagggggcgtatggcgcactgatggatgaggaggacgag
ggctccaagttttgcgaggaggacatcgaccagatcttgcagcgccgcacccaaactatc
accatcgagacagagggcaagggctccaccttcgccaaggccagctttgtgtcttctgga
aacagaactgacatttccctggacgatcccaacttctggcagaaatgggccaaaataacc
gagctggagattgactccaaagcagagaaggagagcctggtgattgatacacctcgtgtg
aggaagcagactcgtcactacaactcgttcgaagacgacgagctgatggagttctctgag
ctggacagcgactcagaagagaggccctgtcgcacccgccgcttcagcgagaggaacaga
cgctacctccgcgccgaatgcttccgcgtcgagaagaacctgctcatatttggctggggt
cgctggaaggacatcctaacccacgggcgcttcaagtggcaactggctgagcatgacatg
gaggtgctttgtcgggcactgctggtctactgtgtgcgtcactacatgggcgatgacaag
atcaagagctttatctgggacctcatcacacctgccaaggatggccataaacaagacctg
cagaaccattctggcctgtccgccccagtgcccaggggacgcaagggtaagaagctaaag
aaccatctgagcgtgcccgagatgaagcatgcagactggcttgtcaactgcaacccagag
gtagtgctacaggacgacagctacaagaaacacctcaagcagcactgcaacaaggtactt
ctgagggtgaggatgctgtactacctcaaggcggaggtcctgggagaaactgctgctcag
tccctggagggcatccatgccagtaaactggaggtggcactccctgatattgactacatc
gagatcccagcaggctggtgggatgcagaggcggataagtctctcctcttaggagtgcac
aaacacgggtatgagcgatacaatgccatgcgggccgactcagagctatgcttcttagag
cgggtgggcatgcctgacgtcacggcgctctcagccgagcagaatggaggagaggtggtg
gctgacctcactgacagtgcttgcaaaagtgatgatgtgaaagatgatcctgaatgcaat
caggaggagggaggagtggaaaaggttgataataaggatgaaaccagctccagtaatgat
gcaatggacaagcatgacagtgttggtcaagacacactctcagtggagatggtccaggag
acctttggccaggagggcatggagctaaagggtcgccctctgtggccggtcggccctgcc
cttacggccaggctacgtcgcctcatcacggcctaccagcgcttcatgcggcgcgagccg
ctgcgccacgacttcctgctacctgaagggctgggggcaggcctggggacgatgtcctgg
cagctgggggaggagattaggcgttacacggtggccgccgccgaacctgaccctctcttc
ctggagtggcagagaaggtgggtgatgatgtcagagcaaaggtggacacggcgtgagcaa
gcagatttctaccgcaccgtgtcgtcgttcggtgtggtgtacgacccggagaagaaagca
ttcgactggagtcctttccgttcctttgcccggttggagaggaagaccgacgagagcctg
gagagatacttcagtagctttgtgtccatgtgccgcaccgcctgcagattgccccccagg
aaggacgaagggcctctggaccacaacctgtttgtggagcccatcacagaggagcgagca
gcacgtaccctataccgcatcgagctgctgcgcaaggtcagggagcaggtgctgcgccac
ccactgctgggcccgcggctgcagctgtgtcggcccagcctctacctgcccgtgtggtgg
gagtgtggcaagcacgaccgcgacctcctgattggagcggcccgccacggcctcagccgc
actgactactacatccttaacgacccgcagctatctttcctggaggcccaccgcaactac
gtccagaaggagaatcaccagggctaccaacccagtgtgcaccacgcaggcatggccccc
tcaccgcaccaccaccacccctgctgcatctatgagacaggcctcggccaatgccactct
ccccagccgccggagtacggtcaccaagccatcccctcctcttcgatccacttccattct
cacccgaacgtccacagtcacctgccagagatagtgggcacgggcctcggtggcagccta
ggtatggtgtctgggccaagggagggcttcctggtttgcccccctctggatgagtcattg
gaactggcatcactgcagcatgagggcctggcctcagattccctccatggcaagtctacc
aaggaggccttcaacgggttccccttcaactcagcgcagggcggccagagcatgctcaac
tcgtatggtgtgcagggggagctgaccagcgagcagtcggccgacatggacccgatcatc
tcaggcaagctgcgcagcgacgtgctggtgggctcctcggaagagaatggccttatggcc
cccttgctggagctggaacaggagctacaggtgccctgggagagcactgaccacacaggc
acagcagatgtcgtgggcatgttcaacgaggccgaccccatcctgggggcaccagccctt
gatacagagttcctggacacagaggagcagccaggagacgggggaagggaggacggagca
gtgggagtgcttgacgactgcctaggtataccctcatcccggagcgacccaggggagccg
ctgccctccagtttcatgctgttcaagaacattgacgtgagcgaggaggagcctgctgca
gagcacacaaacctctccgccagcccccttccttcgtacaccccccctctgcacctgtcg
ctgtcccatatgaccttgcacccccaccaccacaaccagggtgatgtcgagcagccagag
gagaagttgagtgactctgacactgtcgcccacgcgcccagccccgacgagagggaggca
gagagggatgcgtcctttgagtttgacaaagaggagatgtctgtggactgtcctagtctg
gtggggctggagcagggcctggaaacctcatgtataccatgcgaggacactctccaagag
gagccctgctatgggatgggaatgggctctccagtggagtcatgtcaggtggctctagag
aggccaggagaagagactttagaaaggaacacgcccttagggcaagtggcggagacgctt
ctagagggacaggctgaagaacccttggagatatcgcccatggattcccaggagaaggac
ccagtggatggtcctctggaatacttcggtaaagacaaagcactagaaggaccattcaca
gggccgttggagcagtacgacgtagatccagaagcggccttcgaggggcctgccgaagca
gagaacactttaatcgaacacaaactccccactgttgacgctacatatactctgccccca
tcctcctcagtccccaggccccagcctgagccaccactgtccccacgtgtggctggagtg
tcacagatcaaacttgagttccctctggacccagagagctctgagagcaagtcagacata
ctggagcctaacagcactgtcctcacgcccaaactagagcagacagaggtgctgctggag
gtaaaggacaagatcaaggaggagaggccccaaactccagtctctgtagtggacagctat
gtggaggtggcacagtttgccgtccccatgtccatgtgtgagatgcctgatagtctgcag
gacgcgcgggagcccaccatcgcccagctgctgcaggaaaaagccctctactccttctcc
gagtggccaaaggatcgggtgatcatcaaccgcctggacagcatctgtcacgccatcttg
aaggggaagtggccctcctccagccagcagtatgactcccctagctcactggcaaacacc
tgtgtgcctaacattgtgcaccagagggctggcttcatttcagccagggtacagccatcc
cagagccttaacttcaacatcccagcccctcctgtaacccgccttcccaagtacaagtca
agagatgacggggaatgcagccagggaggctggaggttgacatccttgcctctcttgcag
gagaggctggtggcaccaccctatttgcctgaactaaagcggggtaggcgtgcgtttgaa
tgcaaggcagaggtgctcagtaagcagtgccacacaggggagaatatgcctgtaactgtg
tcgaacagtggtggggcactgctgctcaacggctggcaggaggcggccatggacctctcc
aagaccggggatcagggcattggtggcgacgcggcagccactgtaggccacatgagtcac
caagtccaccccattgcccgaaaactgcccgccatgagcgccatgcagggttcagtgggg
aaggacatggccgggatcctgcaggcaggtctcatccaccccgtcaccggccaaattgtc
aatggcaacctgaggtgtgacgacacaatcatgcgccggaggagaggcagacggagaaac
gtggaggcggttgacatcgggtttgtcaagagcagaggaatgcatgtgcaggaaaaacag
tgcagggtagaagtcaccagccattctgcagtgtcgtctacctcctccccacctgagtgc
cccccgggaacctccacccccaccctgtcagaggtggtggccatcgacagagaggctgcc
aacaatggcttgatggaatggctgcgacagaatcccaactgtagcatggaggtgcccact
ttcgcaccgtctcctagctcagcgattctgcacagctttgtggagcggcccaagcagagg
cggcatcgctgtaaagaccccaccaagttggatgtcaactccctaacaggggaggagagg
gtgccagtggtccacaggagcactggccgcaggcttgggggtgctatggctccagcaatc
aaggagctttcacgatggctggatgcaaatactgagtactgcgtggcacctgactgggca
gatgtagtgaaacactctggttttcttcctgagggcaagttcacccgcatcctcactgag
cctgtgtgccgcgaccaagggccccgccgccggggccgtcgtccccgcagcgagatgccc
aagcccctcctctccgagtctcccatgggcccgctctgtatgaacggcggcctgatcggc
agcatggacctggtcggcctccaggacctccgcaatgtccagggcatcccactcacaggc
ttgatgggattcccccatggctttgctgtgtccgccggtgaagacgcaaagaatggtctg
agcatgctgcctatgatgctccacggcgtacatggtgccccccacatgttcagcgttcag
gggctgatgggtttgccgcccacctgctccgcttccacctcctcctccacggctgcagtt
accaccactgcggcctcctcctcagcggccagtagcccctctcgaggccccggccaggca
tcttcgagcacaggggccgagggctccggcattcagtctggcacagagagaaagagggag
gaaaagcagcaaggcgcgatgggcagccacagcattgcagccatcaccaccaccacagcg
accagcagtggcagccaccaggccttcaaccctttcctcattccggggatgtcccatgga
ctgctgtaccctcacatgttcctaccgcacgggggcgtcatggcgctgccaggcatgccg
cctgcagactcctccagcagcccaaagatgaagaagaaaagaacaagggaggaaggggtt
gtggtggtggtggtggaggcaggcagccacagccacttacagacggacagtgggcctccg
aaaaaacacagtgatggccagactggggagagcacggctgaccaggctgggcttaaggac
agggagcagacggaggacagcattcaggaggagggcacgggacatgactcccatgatcct
cccgaggtaaaccccaagaagagcgttgaagaggagagaggaacgatggagattagcttg
atggaggaggaaaaactacctgaggaggagagcgtgtcaaggggggcagagtag
DBGET
integrated database retrieval system
