Oncorhynchus masou masou (cherry salmon): 135542542
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Entry
135542542 CDS
T10723
Name
(RefSeq) CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135542542
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135542542
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
135542542
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
135542542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Adaptin_N
RTP1_C1
Cnd1
MMS19_C
HEAT_DAAF5
ParcG
Paxt-1_C
ZapG-like
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
135542542
NCBI-ProteinID:
XP_064825651
LinkDB
All DBs
Position
6:complement(70964443..71005882)
Genome browser
AA seq
1578 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQDLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILTALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NYDDDDSVDGGRSSSSKGPSSGKKAVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVSTMELFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTSSCQSKSVAVRRRCFEFLDLLLQEWQTNSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAAPSRGPSTPGSLQRSRSDV
DVNAAATASAKTRMTPVPASPAPFSAASALPPGSYASLDNTPGNFRPVGRVRTRRTSSGS
GVGASPSVIDSRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRISRATAGTTPAERRPKVP
RSHGCSRDTSPDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRST
SALHSAESVGHSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPV
RRRYESPGIYSDDDANSDASSACSERSYGSRNGGPPHYMRQTEDVAEVLNHCASSNWSER
KEGLLGLQNLLVSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFITLHREDVQ
DWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLK
VKVAILRYIECLARQMDPVDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFAL
NTPEFTMLLGALPKTFQDGATKLLHSHLRNSSNTRVASPSSTMGRTPPPPRHPSSRSSPL
TSPTNCSHGGSLPGTRLWGWSADGLSKYPPPFPSPLSSTPAAPSLKTLRSAYSPSMLEYD
TENLNTDQIYSSLRGVTEAIQNFSFRSQEDLMEPGRGKREDTPGVGTASHSGADVVEGPG
GRTALDNKTSLLNTPSPRSFSGPRGRDYNPYNYSDTISAYDKAALRETVYEDDVEQLRDG
RQECGGENKMLHTKNSSPAEQLGLVGELLKELSNPSERPEERRGALVELLKIAREDSLAV
WEEHFKTMLLLLLETLSDQDYTIRALALRVLKEILRNQPARFKNYAELTIMKTLELHKDS
HKEVVRAAEESASTLAGSIHPEQCIKVLCPIVQTADYPINLASIKMQTKVIERITKESLH
QLLPDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIK
RAQTSTSNSSSSSDISSY
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggagcaggttatgcagaaggacctgggtcggaga
ctacaggtgggccaggacatcatagactccatcctggacaaggacaagtcccaggacctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactgacagctttggtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtccgagaccaggaccaagctcttctgctaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggaccagggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccatatatgtaatcttttaggagacccaaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctacagacacgtcggggag
cgggtgcggatggacctggggaaaaagggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaaagatcggggaacatgatcctgtcccctgtctcagataag
aactatgatgatgatgattcggtggacggggggcggtcctcctcttctaaaggcccctcg
tcagggaagaaggcagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagacggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgtccactatggaacttttctctaacagggaaatggag
gacgccatgaccaagatcagggaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgcttctggcgggagcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcttgtatcactctgggccacctgtcctacatcctggggaac
aggtttgaccactgtgcagagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatccggcatcgctgtcatacgactcatcatcaggcatacacac
taccctcgtctcattcctatcgtgaccagcagctgccagtcgaaatctgtggccgtaaga
aggcgctgttttgagtttttggacctcttgctgcaggagtggcagaccaactctctagag
aggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagttgccaggaagtgctactggaccttccacggccacttcagccgggaggcg
gagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacaccgtgaccaggacgaaa
gcggctccctccagaggtccctccaccccgggctctctccagcgttcccgtagcgacgtg
gacgtgaacgctgctgccaccgctagtgccaaaaccaggatgactcccgtgcccgcctcg
cccgcccccttcagtgctgcctcggctctgccacccggctcctatgcctctctagacaac
acacctggtaactttagaccagtgggccgtgtgcgtaccaggagaacgagttcggggagc
ggcgtgggggcgagtccctctgtcatagacagtagggggaggagtcgagccaaaatggtg
tcagtgtctcaacctggcagtcgttctggctcccctggtcgtctcctgagccatacatac
ggcaggatctccagggccactgcagggacaacgccagcagaaaggaggcctaaagtcccc
cgcagccatggctgcagccgagacaccagtccagacagatcaggcctggcgaggagtcgt
atcccccggcccagcatgagtcagggctgcagcagggacacctctagagagagcagccga
gataccagccccgctcggggattctctcctctggcatccagacgtgtctcccgctccacc
agtgctctccactcggctgagtctgtgggccactcagagcgtctaggtctggcccaccag
gcccgtatctcagcctctgtcaacgccatgaggatcctcaacactgggaccgaggtggag
gcagctgtagccgacgccctgttactaggcgacgccaggaacaacaagcggcggccagtc
agacggcggtacgagtccccgggtatctactcagacgacgacgctaacagcgacgccagc
agcgcctgctctgagcgctcgtatggctcgcggaacggcggcccgccccactacatgaga
cagacagaggacgtggccgaggtgctgaatcactgtgccagttccaactggtctgagagg
aaggaggggttgctgggactacagaacctgctcgttagccagagaattctcagtcgtgtg
gagctgaagcgattgtgtgagatcttcacaaggatgtttgctgacccacacagcaaggtg
ttcagcatgtttctggagaccctggtagacttcatcaccctgcacagagaggacgtgcag
gactggctgtttgtcctgctcacccagctgctgaagaagatgggagctgacctcctgggt
tccgtacaggccaaggtccagaaggctctggacgtcaccagggactcgttcccgttcgac
cagcagtttaacatcctgatgcgtttcatcgtggaccagacccagacccccaacctgaag
gtcaaggtggccatcctgaggtacattgagtgcctggcccgtcaaatggaccccgtagac
tttgtcaactccagcgagacgcgcctggccgtctctcgcatcatcacctggaccacggaa
ccaaagagctccgacgtccggaaggcggctcaggtggttctgatcgccttgtttgcgctg
aacaccccagagttcaccatgctgcttggggccctgcccaagaccttccaggacggagcc
actaaactgctgcatagccacctgcggaactccagcaacaccagagtggcttctcccagt
agcaccatgggacgtactcctcccccacctcgccaccccagcagtcgcagcagccccctc
acctctcccaccaactgctcccatgggggctctctcccaggtacccggctatggggttgg
agtgctgatggcctgtcaaagtacccccctcccttcccttctcctctctcctccacccct
gctgccccctccctcaagaccctacggagtgcttactctcccagcatgttggagtacgac
acagagaacctgaacaccgatcagatctatagctccctgcgaggcgtcactgaggccatc
cagaacttcagcttccgcagtcaggaggacctcatggagccgggcagaggcaagagagag
gacacgccgggtgttggaacagcatcgcactctggtgccgacgtggtggaggggcccggg
ggtcgcacggccctggacaacaagacctccctactcaacaccccctccccccgttccttc
tccggcccccggggccgcgactacaacccctacaactactctgacaccatcagcgcctac
gacaaggctgccctgagagagacggtgtacgaggacgacgtggagcagcttcgagatggc
cgccaagagtgtggtggagaaaacaagatgctgcacaccaagaacagttcccctgcggag
cagctgggactggtgggtgagctgctgaaggagctgtctaaccccagtgagaggccagag
gagaggaggggagccctggtggagctgctgaagatagcccgggaggacagcctggcagtg
tgggaggaacacttcaaaaccatgctgctcctgctgctggagactctgtcagaccaagat
tacaccatccgggcactggcgctacgagtgctgaaggagatcttacgcaaccagccggcc
cgcttcaagaactacgcagaactcaccatcatgaagaccctggagctacacaaagactcc
cacaaagaggttgtgcgggcagcagaggagtcagcctccaccctggccggctccatccac
ccagaacagtgtatcaaggtgctgtgtcccatcgtccagacggctgactaccccatcaac
ctggcttccatcaagatgcagaccaaggtgatcgaacgcatcaccaaggagtccctgcac
cagctgctgcctgacatcataccaggactactgcaggggtatgacaacacagagagcagt
gtgaggaaggccagtgtgttctgtctggtggctgtctactctgtcattggtgaagagctg
aagccctacctggcccagctcacaggaagcaagatgaagctgctgaacctgtacataaag
agagcccagacgtccaccagcaacagtagtagctcctcagacatctcctcatactaa
DBGET
integrated database retrieval system
