Oncorhynchus masou masou (cherry salmon): 135542644
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Entry
135542644 CDS
T10723
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135542644
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135542644
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135542644
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135542644
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135542644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
GRP
Motif
Other DBs
NCBI-GeneID:
135542644
NCBI-ProteinID:
XP_064825828
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All DBs
Position
6:complement(75902350..75910211)
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AA seq
307 aa
AA seq
DB search
MSDNEKDFGERDSRSASRSVSPRGSGKSASRSPAHSPARSKDGSRHSRSKSHSRSRSKSR
SRSHRSSRRHYSRSRSRSHRRRSRSRSRSGEYRRRRSHSHSPMSNRRRHIGNRANPDPNC
CLGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANEAKER
ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGSSSSGGGGGGGGGGGSGGPS
SSSSRRSSKDYDRGGDRGYDRGYDRGYDRYDDRECYRSYRRRSPSPYYSRGAYRSRSRSR
SYSPRHY
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaaaaggattttggcgagcgggattctcggtccgcttccaggagtgtg
agcccaaggggttctgggaaatctgccagccgttccccggcccattccccagcccgctcc
aaagatggctccagacactccaggtctaagtcccactcccgatcccgctccaagtccagg
tctcgttcccacagaagctcccgcaggcattattcccgctctcgctcccgttcccaccgc
cgccgttcccgtagccgttcccgaagcggggaataccgccgccgtcggagccacagccac
tcccccatgtccaaccgccgcaggcacattggcaaccgggccaacccggacccgaactgc
tgcctgggtgtgtttggtctgagcctgtacaccacagagagagacctgagagacgtgttc
tccaagtacggccccctggctgacgtcagcatcgtctacgaccagcagtcacgacgctcc
cgcggcttcgccttcgtctacttcgaagtccgagaggacgccaatgaggctaaggagagg
gctaatggaatggagttggatggacggaggatcagggtcgatttctccatcactaaacga
ccacacactcccactcctgggatatacatgggacggcccacatatggtggcggcggcggc
agcagcagcagcggaggcggtggaggaggaggaggaggaggaggaagtggcggccccagc
tcaagctcatctcgccgtagctcaaaggattacgaccgcggcggtgaccgtggttacgac
agaggctacgaccgtggctacgatcgctatgacgaccgagagtgctacaggtcctacaga
cgcaggtctccgtccccgtactacagccgaggggcctaccggtctcgctcccgctcgcgg
tcttactccccacgccactactga
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