Oncorhynchus masou masou (cherry salmon): 135542740
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Entry
135542740 CDS
T10723
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04622
RIG-I-like receptor signaling pathway
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135542740
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135542740
mRNA cycle factors
Common to processing body (P body) and stress granule
135542740
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135542740
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135542740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135542740
NCBI-ProteinID:
XP_064825980
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All DBs
Position
6:79633444..79655120
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AA seq
781 aa
AA seq
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MSHVAVENLHGLEQQLAVLGLNNADGQGGGTGRTCYIPPHLRNQEASKNADAFSRPSALS
MAPGSYTPGGWDGGRNNGFVQNGYHDNRMNGGNRYNSGPPRMERGRGGGGFRGGRGGSYN
PVQPMQNAGMFGVYDNKDGGGWNTTKDAYTSFGARPDRGKSAFFNNGGSAPRGSYQRGGF
GGSGNSRWVEESRDDEDWSKPTQANERLEQELFAGGNTGINFDNYDDIPVEATGQNCPHH
IDSFQDVEMGEIIMSNIALTRYTRPTPVQKYAIPIIKNKRDLMACAQTGSGKTAAFLLPV
LSQIYTEGPGEALAAQKSGGQDNGKYGRRKQYPLALVLAPTRELALQIYEEARKFAYRSR
VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLD
MGFEPQIRRIVEQDTMPPKGIRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSEN
ITQKVVWVEDGDKRSFLLDLLNATVIPSEVQDNAGENIEKPGKNSLTLVFVETKKGADAL
EDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDISNVKHVINFD
LPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYE
HQHKSNTRGRSKRFTSGGFGARDYRQTSGGGSTGGFGGRGGRQPGGHGGNRGFGGGGGFG
GNFYTSDGYGGNYTHQGEWTGGATKRSSNPIPIYLHPPPPHPPTIAMGHAMPNSLMRKPH
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatttacacggtctagaacagcagcttgctgtcctaggc
ttgaacaatgctgatgggcagggtggaggcactggcaggacctgttacattccacctcat
ttacggaaccaagaggcttccaaaaatgcagatgctttctctagaccgagcgccttgtca
atggcaccaggaagctatacgcctggcggttgggacggtggacgcaacaatggcttcgtg
cagaatggttaccacgacaaccgcatgaatgggggcaacaggtacaacagtggcccgcct
cgcatggagaggggcagggggggtggaggtttccgcggcggaaggggcgggtcctacaac
ccggtacagcctatgcagaatgccggcatgtttggcgtctacgacaacaaagatggcggc
ggctggaacacgactaaagatgcctacaccagcttcggcgcacgtcccgacaggggaaag
tctgcttttttcaataacggcgggagtgcaccccgaggaagttaccagcgtggagggttt
ggaggcagtggaaacagccgctgggtggaggagtccagggatgatgaggactggtccaaa
cccactcaggccaatgagcgcctggaacaggagctgttcgctggtggcaacacagggatt
aactttgacaattacgacgacattcccgttgaggccactggccaaaactgcccccatcac
attgacagcttccaagacgtggagatgggagagatcatcatgagtaacattgccctgacc
cgctacactcggcccactccggtccagaagtacgccattccaatcatcaagaacaagagg
gacctgatggcctgcgcccagacaggttccggtaagactgctgcgttcctgttgcctgta
ctgagtcagatctacactgaaggcccaggagaagccctcgctgcccagaagtctggagga
caggacaacggaaagtatggtcgccgtaagcagtaccccctcgctctggtcctggccccc
accagagaactggccctgcagatctacgaagaggccagaaagtttgcataccggtcccgt
gtgcgtccttgtgtggtgtacggaggggctgacattggccagcagatcagagacctggag
cgaggctgtcacctgctggtggctacacctggacgcctggtggacatgatggagaggggc
aagatcggcctcgactactgcaattacctagtgctggatgaggctgaccggatgttggac
atgggttttgagccccagatcagacgcatcgtggagcaggacaccatgccccctaaaggc
atccgtcagaccatgatgttcagcgctaccttccccaaggagatccagatcctggcgcgt
gacttcctggaggagtatatcttcctggcggtgggaagagtgggctccacctctgagaac
atcacccagaaggtggtgtgggtggaggacggtgacaagaggtccttcctcctggacttg
ctcaatgctacagtcattccgagtgaagttcaggacaatgcaggtgaaaacatagagaaa
cctggtaagaactctctgacgctggtgtttgtggaaaccaagaagggagcggatgccctg
gaggacttcctgtaccgcgagggttacgcctgcaccagtatccatggcgaccgctcccag
agggaccgagaggaggctctgcaccagttccgctcgggacgctgccccatcctggtcgcc
acggcggtggctgcccgtggcctggacatctccaatgtcaagcacgtcatcaactttgac
ctgcccagcgatatagaggagtacgtccaccgtattggccgtactggacgtgtaggcaac
ctgggtctggccacgtcgttcttcaacgataagaacggcaacatcaccaaggaccttctg
gacatcctagtggaggccaaacaggaagtaccctcctggttggagagcctggcctatgaa
caccagcacaagagcaacacccgcggacgctccaagaggttcacctctggtggcttcgga
gccagggactaccgtcagaccagtggcggcggcagcactggagggttcgggggtcgtggt
ggacgccagcccggtggacatggaggaaaccgtggattcggtggcggcggtggctttgga
ggaaacttctacaccagtgacggctatggaggaaactacactcatcagggggagtggact
ggtggggcaactaaacgttcctccaaccctatccccatctacctacaccccccccccccc
cacccccctaccatcgcaatgggtcacgccatgccaaactcactgatgaggaaaccacat
gtgtaa
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