Oncorhynchus masou masou (cherry salmon): 135542754
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Entry
135542754 CDS
T10723
Name
(RefSeq) runt-related transcription factor 1-like isoform X1
KO
K08367
runt-related transcription factor 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135542754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135542754
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
135542754
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
135542754
NCBI-ProteinID:
XP_064826004
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Position
6:80159512..80205286
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AA seq
477 aa
AA seq
DB search
MASNSIFESMSSYQPCFIRDPAPGRRFSPPSTTLLSGKMSEGLPLGAQESSSAALVGKLR
IADRGMVEVLSEHPGELVRTDSPNFICSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTV
MAGNDENYSAELRNATAALKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRA
IKITVDGPREPRRHRQKLEDVKTGALAFSERLSELEQLRRSSMRVTPPHHHHHHAPTPNP
RPALNPAQFSNPTHHTQIPDSRQMQTSPSWSYEQSYPYLGQITTPTVHSTTPISPSRSSL
SDLSSRLSGPDLTAFSDPRMSLDRPFSSLTSLPDSRYPDPRMHYPTGAFTYTPTPVSNGA
IGLTMATTPAGRYHTYLPPPYPTNAPQGQGGPFQAGSSPYHLYYSTAAGSYQFSMMAGGG
GERSPQRIFPPCTNASIGSSLLHPSLPNQSEGVGVEAEGSHSSSPTNMVPEAVWRPY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaacagcatctttgaatccatgtcatcctaccagccttgcttcatcagggac
ccagcacctggtcggcgcttctcccccccttccaccaccctgttgtcaggtaagatgagt
gagggtctgcccctgggtgcccaggagagcagtagcgccgccctggtgggaaagctgcgt
attgcagaccgaggcatggtggaggtgctgtcagaacaccctggagaactggtgaggaca
gacagccccaacttcatctgttctgtcctacccacacactggaggtgcaacaagacgctg
cccatcgcattcaaggtggttgcccttggtgatatccctgacggtaccttggtcacggtg
atggcggggaacgatgagaactactcagcagagctccgcaacgccacggccgccctcaag
aaccaggtggctcgcttcaacgacctgcgcttcgtaggccgcagcggacgagggaagagt
ttcactctgaccatcacggtgttcaccaaccctccccaggtggccacctaccagagagct
atcaagatcaccgtggacgggcccagagaaccacgccgccacagacagaagctggaggat
gtgaagacgggagcattggccttctccgagcgtctcagtgagctggagcaactaaggcgg
agctccatgagggtcacgccccctcaccatcatcaccaccacgcccccactcccaatccc
cggcccgccctgaacccggcccagttcagcaaccccacacaccacacacagataccagac
tctaggcagatgcagacatctccgtcgtggtcctatgagcagtcctacccctacctgggt
cagataaccacgcccaccgtccactcaaccacgcccatctcacccagccgctcctccctc
agtgacctgtccagccgcctctcaggccctgacctcacagccttcagcgacccccgtatg
tctctggatcgcccgttctcctccctgacctcgctccctgacagccgctaccctgacccg
cgcatgcactaccctactggggccttcacatacacccccacccctgtatccaacggcgcc
atcggactgaccatggcaaccacccctgctgggcgttaccacacctacctccccccgccc
taccccacaaacgccccccagggccaaggtggaccgttccaggccggttcctctccctac
cacctgtattatagcacggccgccgggtcctaccaattctccatgatggcggggggaggc
ggggagcggtctcctcagaggatattccctccctgcaccaacgcatccataggctcctcc
ctcctgcacccgtctctgccaaatcagagcgaaggggtgggggtggaagcggagggaagt
cacagtagctcccctaccaatatggtacccgaggcagtatggcggccatactga
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