Oncorhynchus masou masou (cherry salmon): 135542921
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Entry
135542921 CDS
T10723
Name
(RefSeq) general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135542921
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
135542921
TFIIIC, fungi type
135542921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_14
TPR_1
TPR_19
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
TPR_10
TPR_EMC2
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
135542921
NCBI-ProteinID:
XP_064826132
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All DBs
Position
7:4439459..4464108
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AA seq
1052 aa
AA seq
DB search
MSAFSSELIDYLEGRISFEEFEIRREERKAKLKVSNEGLSEEDEEIGPDDTLPSTSHGRS
PRKCSKKRPAADPEEGVSPSVQKAFASMMGEGTETEQTEEEEEEDEEEDEDNDDDYEEEE
EEDSEEERKVEAKGDEEGPSAGDVFALEMELNRENKKMMKERRNRSKLPRALRGLMGEAN
IRYARGDKEDAVLMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAHLNPSDC
EEWVKLADMSLEQDNIRQAIICYTKAIKYDPSNVRYLWERCSLYEQVGEHKQSMDGYRRI
LNLLPPTDGEHFMQLSRDMAKSYYESSDLPSAMGVMEEALRRHPELVTDESINMAAELYI
ANHQHDKALQVLVQFCGIILERGEPKPDLAEEENPEEEQEKMEAEENPEEQKKMEAEEEN
PENMEAEENPEEEEEQKKMETEEEQKKKEAEEENPEEEQEKMEAGEENPENMEAEENPEE
EEEQKKKEAEEENPEKEKEMKTATTEEPGEVRGVVVPDHVPVDIRVKLMVCLIHQHVYRP
LDSMLTSLMEQSPEELGDLYLDVAEAFLDQGEYNSALPLLSALVCSERYNLAVVWLRHAE
CLKALGHMEVAVKSYNKVVQMAPLHLEARLCLSTLQQQLGRPLCALKALEPMYDPDTLAQ
DASAAQQELKLLLHRSTLLRSQGRLDDYLDTMLTMLAMLLKVAMTRAQVCVKASMWAGVR
HLRLVKVSKDLVSDIHDQEAAYRDISGKTSVLSREDWWLLLVRCVCTLCEMKRFREAELL
VDSSLEFYSFYDVKVKRKELEFFGLSAAFLDHNYRKAYDYIRLTLMEKQEWPMLWNVFNQ
VTLHSQDVRHHRFCLRLMMKNPDNHALCVLSGHNALVSGSFKHALGQYVQAFRSKPDDPL
YSLCVGLTFFHMASQKFVVKRHPLILQGFSFLWRYVEQRGPCQESMYNLGRALQQMGLAH
LAIHYYHKALSFPPLTLEGIADDQVDLRREIAFNLSLIYQASGNTEMVRHLINTYYCWMR
AVLRSSAAWLGFNLRLSRACTGVVAMRQDSGY
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttcagctcagagctcattgactacctggagggaagaatttcattcgaggag
tttgaaatacggagagaggaaagaaaagctaaattgaaggtatcgaacgaagggctttca
gaggaagatgaagagattggaccagatgacactctccccagcacttcccacggccgcagt
ccgagaaaatgttctaaaaaacggcccgcagcggatcccgaggaaggcgtcagcccctct
gtccagaaggcttttgcctcgatgatgggggagggaacagagactgaacagactgaggaa
gaggaggaggaggatgaggaggaggatgaagacaacgatgacgattatgaagaagaggaa
gaggaggattcagaggaggagaggaaggttgaagctaagggagatgaggaagggccctca
gctggggatgtctttgctctggaaatggagcttaaccgagagaacaagaagatgatgaag
gagagacgtaaccgcagcaagctgccccgggccctaaggggcctcatgggagaagccaac
atccgttacgcccgcggagacaaggaggacgccgtcctgatgtgtatggagatcatcaga
caggccccgctggcctacgagcccttctccaccctggctatgatctatgaagaccagggg
gacatggagaagtcactacagtttggcctgatcgctgctcatctcaaccccagcgactgt
gaggagtgggtcaagctggccgacatgtctctggagcaggacaacatcaggcaggccatc
atctgctacaccaaagccattaagtatgaccccagtaatgtgcgctacctatgggaacgt
tgcagcctgtatgagcaggtgggggaacacaagcagtccatggacgggtaccgtcgtatc
ctcaacctactgccccctactgacggagagcacttcatgcagctgtcacgagacatggcc
aaaagctactatgagagtagtgacctgccgtcagccatgggggtgatggaggaggctctg
aggagacacccagagttggtgacagacgagagcatcaacatggctgctgagctctacata
gccaaccaccaacacgacaaggcccttcaggttctagtccagttctgcggaatcatcctg
gagagaggagaacctaagccagaccttgcagaggaggagaacccagaggaggagcaggag
aagatggaagcagaggagaacccagaggagcagaagaagatggaagcagaggaggagaac
ccagagaacatggaagcagaggagaacccagaggaggaagaggagcagaagaagatggaa
acagaagaggagcagaagaagaaggaagcagaggaggagaacccagaggaggagcaggag
aagatggaagcaggggaggagaacccagagaacatggaagcagaggagaacccagaggaa
gaggaggagcagaagaagaaggaagcagaggaggagaacccagagaaagaaaaggagatg
aaaactgcgacaacagaggagcctggggaggttagaggggtggtagttccagaccatgta
ccagtggacatcagagtgaaactcatggtctgtctgatccaccagcatgtttacagacct
ctggattccatgttgacgtctctgatggagcagagcccagaggagctgggggatctgtac
ctggacgtggctgaggccttcctggaccagggagagtacaactcagccctgcctctcctc
tctgccctggtctgctctgagagatacaacctggctgttgtctggctccgacacgctgag
tgtctgaaggcgctgggccacatggaggtagcagtgaagagttacaacaaggtagtacag
atggctcctcttcacctggaggccaggctgtgtctgtctactctgcagcagcagctgggt
cgacctctctgtgccctcaaggccctggagcccatgtacgacccagacacactggcacag
gacgcctccgcggcacagcaggagttgaagctgctgctacaccgctctactctcctgcgt
tcccaaggccgactggatgactacctggataccatgctgaccatgctggctatgctgctg
aaggtggctatgacgcgggcccaggtgtgtgtcaaagccagcatgtgggcgggggtcaga
cacctgcgtctggtcaaggtgtctaaggacctggtgtcagacatccacgaccaggaggca
gcctaccgggacatcagtggtaagaccagtgtgttgtctcgtgaggactggtggttactg
ttggtgaggtgtgtgtgtacgctgtgtgagatgaagcgttttagagaggcagagctgctg
gtagactcttctctggagttctactccttctatgacgtcaaggtgaagaggaaagagctg
gagttctttggtctgtcggctgctttcctggaccataactaccgcaaggcctacgattac
atcagactgacgctgatggagaagcaggagtggcccatgctgtggaatgtattcaaccag
gtgacccttcactcccaggacgtgcgtcatcatcggttctgtctgcgtctgatgatgaag
aacccagacaaccacgccctgtgtgttctcagtggacacaacgcactggtgtctggcagc
ttcaaacacgccctcggtcagtatgttcaggcgttcaggtctaagccagatgaccctctg
tacagtctgtgtgttggcctcaccttcttccacatggcgtctcagaagtttgtggttaaa
cgccacccgctaatactgcagggtttctcattcctgtggcgttacgtggagcagcgtggg
ccctgccaggagagcatgtacaacctgggacgggccctgcagcagatgggcctggcacac
ctcgccattcactattaccacaaggctctcagcttccctcctcttacactagagggtatt
gcggatgaccaggtcgacctgcgtagagagatagccttcaacctgtcactcatctaccag
gccagtggaaacactgagatggtacgacacctcatcaacacctactactgttggatgcgc
gctgtgttaagaagcagtgcggcttggttgggtttcaacctgcgtctctcccgagcctgt
acgggagttgtagcgatgagacaagatagtggctactaa
DBGET
integrated database retrieval system
