Oncorhynchus masou masou (cherry salmon): 135542974
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Entry
135542974 CDS
T10723
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135542974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omm03400
]
135542974
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135542974
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
135542974
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
135542974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
Cactin_mid
HHH_2
NTP_transf_2
DUF4806
Cdd1
Motif
Other DBs
NCBI-GeneID:
135542974
NCBI-ProteinID:
XP_064826169
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All DBs
Position
1:complement(34883585..34892000)
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AA seq
336 aa
AA seq
DB search
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNAYRKAASVISKYPQKIKNGEEAK
KLDGVGKEIAKKIDEFLQTGTLKKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRSEMTKMETLILQELELVDTEYIGTICGS
YRRGAESSGDIDILLTHPNYTSVDEKQPKLLHAVVEHFESIGFITDTLSKGDTKYMGVCQ
LQQKDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PVGVTGMAGEPLMVDSEKDIFDYIQWKYREPKERSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaggaaagcgccacaggaatccccaaacgagggaataacagactttcttacc
gaattggccaactatgagaggaatgtcaacagagctatacacaagtacaatgcctacagg
aaagcagcttcagtgatctccaagtacccccagaagatcaaaaatggggaagaggccaag
aaactggatggcgttggaaaagagatcgctaagaagatagatgagtttttacaaacagga
acacttaagaagttagaaaagattcgtaatgatgacaccagctcctccatcaatttcctt
accagagtcactggtattggtcctgctgctgccagaaagttctttgatgagggagtgaag
actctggaagatctgaagaaaatcgaacacaagctcaatcatcatcagcagattggactc
aagtactttgaggagtttgagaagaggattccacgatctgagatgacgaagatggagact
ctcattctgcaggagctggagttggtggatactgagtacattgggacaatctgtggaagc
tacaggagaggtgctgaatccagtggggatattgatatcttactaacccacccaaactac
acctctgtggatgagaaacagcccaaacttctccatgccgtggtggagcattttgaatcc
attgggttcattacagacacactgtccaaaggagacaccaaatacatgggagtctgccag
ctgcagcagaaggacgaagatgaggaggaatatcttcacagacgcattgatatcaggtta
attcctaaggaccagtattactgtggtgtgctgtatttcactggcagtgacatcttcaat
aagaacatgagaactcacgctctggagaaaggcttcaccctcaacgagtataccatccgt
ccagtgggggtcactggtatggccggggaacctctgatggtggacagtgagaaggatatc
tttgactacatccaatggaaatacagagagcctaaagaacgcagcgagtga
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integrated database retrieval system
