Oncorhynchus masou masou (cherry salmon): 135543070
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Entry
135543070 CDS
T10723
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04142
Lysosome
omm04144
Endocytosis
omm05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
135543070
Exosome [BR:
omm04147
]
Exosomal proteins
Proteins found in most exosomes
135543070
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135543070
NCBI-ProteinID:
XP_064826239
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Position
1:35043402..35078218
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AA seq
1683 aa
AA seq
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MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPASKVIALKAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTEAAVYHWSMEGDSQPIKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKLHIIEVGQPATGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHELTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAVRSNLAGA
EELFARKFNTLFAQGSYSEAAKVAASTPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKPVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYTKKVGYSPDWVFLLRNVMRVSPEQGLQFSQMLVADE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFSHYDRAHIAQLCEKAGLQQRALEHYTDLFDIKRAVVHTHLLNPEWLVNFFGALSV
EDSVECLQAMLSANIRQNLQLCVQVASKYHEQLGTNTLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLSWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENTFY
DSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYVNRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEQISNLDRAYEFAERCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYMEV
VSAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTVRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCCAC
VNGEEFRLAQICGLHIVIHADELEELISYYQDRGYYEELIGLLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTMMS
HPTDAWKEVQFKDIIAKVANVELYYKSLSFYLDNKPLLTNDLLTILSPRLDHSRTVSYFT
KVNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDGMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEVEEKVTVD
KLEESESQRKTEEEVTEPTPIVFGQQLMLTAGSAPVAPQPGYPGGYGYAAPGYSPQPPYS
YNM
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgccgatacgatttcaggaacatctgcagctgcagaacctgggggtg
aacccggctaacattggtttcagctacctgaccatggagtctgacaagttcatctgcatc
cgggagaaggtgggcgagcagaaccaggtggtgatcatagacatggccgaccccaataac
cccagcagacgtcctatctctgctgacagcgccatcatgaaccctgccagcaaggtcatc
gccctcaaagctgctaagtgcctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacaccatgaccgaggaagtcatgttctggaagtggatctctgtcaacaccgtcgcc
ttggtgactgaagcggccgtctaccattggagcatggagggggactcgcagcccatcaaa
gtgtttgatcggcacgctagtctggccggatgccagatcataaactacagaacagacgaa
cagcagaagtggctcctccttatagggatctcggcacagcaaaaccgtgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgaaggccatgctgcagcc
ttcggagagtttaaggtggagggcaacaccaaagcctccactctgttctgcttcgctgtg
cgcagccaggctgggggcaagctgcacatcatagaggtgggtcagccggctacagggaac
cagccctttactaagaaggctgttgacgtgttcttcccacctgaggctcagacagacttc
cccgttgccatgcagattggcaccaagcacggtgtgatatacctgatcacgaagtatggc
tacatccacctgtacgacctggagtcaggagtgtgtatctacatgaaccgcatcagcgcc
gagaccatctttgtcaccgccccccacgaactcacctccggcatcatcggggttaacaag
aagggacaggtgttgtcagtgtgtgtggaggaggaaaacatagtgaactatgccaccaac
gtgctgcagaacccagacctgggcctgaggatggccgtgcgttctaacctggccggggct
gaggagctatttgccaggaagttcaacacactgttcgcccagggctcctactccgaggct
gccaaggtggccgcatccacaccaaagggtatcctgcgcacagcggagaccatccgtaaa
ttccagagcgtgccagcccagccgggccaggcctctcctctgctgcagtactttggcatc
ctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcctgtgcta
cagcaaggacgcaagcagctgctggagaagtggctgaaagaggacaagctggagtgttgt
gaggagcttggtgacctggttaagccagtagatcctacgctagccctcagtgtctacctc
agagccaacgtacccagcaaggtgatccagtgctttgctgagaccggacagttccagaag
atagtgctctacaccaaaaaggtgggctactctccagactgggtgtttctgttgaggaat
gtgatgcgggtcagtccagaacagggtctacagttctctcagatgctggtggcagatgag
gagcccctggccaacatcaaccagatagtggatgtgttcatggagggaagtctgatccag
cagtgtacctccttcctattggacgctctgaagaacaatcagccagccgagggacaccta
cagacacgcctactggagatgaacctcatccacgccccccaggtagccgacgcgatcctt
ggcaaccagatgtttagtcactatgaccgcgcccacatcgcccagctgtgtgagaaggct
ggactgcaacagagggctctagagcactacactgacctgttcgacatcaaacgggctgtc
gtacacacacacctgctcaaccctgagtggctggtgaatttctttggcgccctgtcagta
gaggactcagtagagtgtcttcaggccatgttatcagccaacatcagacagaaccttcag
ctgtgtgtccaggtggcatcgaaataccacgagcagctgggaacaaacaccctggtggag
ctctttgagtccttcaagagctacgagggtctgttctacttcctgggctccatagtgaac
ttcagccaggaccctgacgtccattttaaatacatccaggcggcctgtaagacagggcag
atcaaggaagtggagcgcatctgtagagagagcaactgttacgacccggacagggtcaag
aacttcctcaaggaggctaaattgacagaccagctgccgttgatcatagtgtgtgaccgc
tttgactttgtccatgacctggtgctctatctctaccgcaacactctgcaaaagtacata
gagatttacgttcagaaggtgaaccccagccgtctgcctgtggtgataggaggtctgttg
gatgtagactgtgctgaagacgtcattaagaacctgatcatggtggtgagaggacagttc
tccactgatgagctggtggcagaggtggagaagaggaacagactgaagctgttgttgtcg
tggcttgagtctcgtatccacgagggctgtgaagagccggctacccacaatgccttggct
aagatctacattgacagtaacaacaccccggagcgcttcttgaaggagaacaccttctac
gacagcgctgtagtggggaagtattgtgagaagagagacccccacctcgcctgtgtcgcc
tatgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactcccttttc
aagagtgaggctcgctacctggtccgacggaaagacccagaactatgggccaacgttctt
gaggagaataacccttatagacgccaactcatagaccaggtggtgcagactgctctgtca
gagacccaggacccagaggaggtgtctgtgacggtcaaggccttcatgacagctgacctg
cccaatgagctcattgaactactggagaagattgtactggacaactcagtcttcagcgag
caccgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacgcgtgtg
atggagtacgtcaaccgcctggacaactacgatgcccccgacattgcaaacatcgccatc
agcaacgagctcttcgaggaggccttcgccatcttcaagaagtttgacgtcaacacctcc
gccattcaggtcctgatcgagcaaatcagtaacctggacagagcctatgagtttgcagag
cgttgtaatgaggccgcggtatggagtcaactggccagagcccagctccagagagacctg
gttaaagaggccattgattcctatattaaagccgacgacccgtcagcctacatggaggtg
gtcagcgctgccagcaagaacaataactgggaggatctggtgaagttccttcagatggct
cgtaagaaggccagagagtcgtatgtagagacagagctcatctttgctctggctaaaact
gtcagactggccgaactggaggaatttgtcagcggcccgaacaacgcccatatacaacag
gtgggagataggtgttatgaagaagggatgtacgatgctgccaagctgctgtacaataac
gtgtccaactttgcccgcctggcatccacgctggtacacctaggagagtaccaagctgct
gtggacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgttgtgcgtgt
gtgaatggggaagagtttcgattggctcagatctgtggtctacacattgttatccacgct
gatgaactggaggagctcatcagctactaccaggaccggggttactatgaggagctgata
ggcctgttggaggccgcgttgggtttggagcgtgctcacatgggcatgttcactgagctg
gccatcctctactccaaatttaaaccccagaagatgagagaacacctggaactcttctgg
tcccgtgtcaacatccctaaggtgctgcgagcggcggagcagtcccatctgtgggcagag
ttagtgtttctgtatgataaatacgaggaatatgacaacgctgtcctcacgatgatgtca
caccctacggacgcttggaaggaggtgcagttcaaggacatcattgccaaggtggccaat
gtggagctgtactacaaatccctttccttttacctggacaacaaacctctgctgacgaat
gaccttctgaccatactgtcaccacggttagaccacagccgcacggtcagctacttcacc
aaggttaaccagttgaagttggtaaagccttacctgaggtcagtccagagtcataacaac
aagggagtcaacgaggccctcaataacctgctgactgaggaggaggactaccagggtctg
agggcgtctatcgatgcatatgataactttgacaccattggtttggcccagagactggag
aagcatgagctgattgagttcagacgcatcgcagcatacctctacaaaggcaacaaccgc
tggagacagagcgtggaactctgcaagaaggacaaattatacaaggatggaatgctgtac
gctgctgagtctaaggatgctgagctggctgagaccctgttgcagtggttcctggaggag
ggcaggaaggagtgtttcgctgcctgtctgtttgcctcctacgacctgctgcaccctgac
gtggtactggagctggcctggagacacaacatcatggactttgccatgccatacttcatc
caagtcatgagggagtacctcaccaaggttgatgaggttgaggagaaggtgacggtggat
aaactggaggagtcagaaagccaaaggaagactgaggaagaagtcacagaacccaccccc
atagttttcggtcagcagctgatgttgacggcaggctcggctccagtggcaccccagcct
ggatacccaggaggctacggatacgctgccccaggctactctccccagcccccttacagc
tacaacatgtag
DBGET
integrated database retrieval system
