Oncorhynchus masou masou (cherry salmon): 135543121
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Entry
135543121 CDS
T10723
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135543121
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135543121
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135543121
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135543121
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135543121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
135543121
NCBI-ProteinID:
XP_064826271
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Position
7:complement(3133937..3144265)
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AA seq
894 aa
AA seq
DB search
MFNKTGPGLSSRGVLWGLCILLLYTSPLCCFANFSQAKELVYKIKEGLPSGTLIGSMGSD
LHLDLSLDPHVLFNLPQKKPSDQYVTLNSTTGQLFTSGKEIDRETLCPDSSEYNQGCVLS
LDVFVLPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSVPENTQVNARFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDRERREEYVTDIIAEDGGLPP
LLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTTKGEHLSRLHAFDPDQGANAVISYAY
SDRVPREARALFHLDRITGVIKLAGQINTATGKYYKLTVLANGPGCVPAVATVTVHVIRV
ASGPPVIMPRYIAAEKDGVVKMKESEPPFSPIAFFTVSNTDQRGPGTECLLEGFGPFRLT
PYKRLKNEYLLETTESLDHEQRQDYELTVVLRNPRGLAIKTFVKILVLDENDNAPVFKQS
LYEVSVEENNPPNSFLTQLQATDQDSEARGEVIYTLGSDAPSVFLLERLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSIVNGSDIFVIDAGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTVVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPDTGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIQSLLTGEAAEIQMEEKQWYVGKLTERPGREDLFPCQPLLIALSVTCL
GLFCIVVTLTAYICCKKLKKWRKRQMKRLEVEMPLKMNGDVRDADRKRTEISNI
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaacaggacccggacttagctcgagaggagtactgtggggtttgtgtata
ctcctcctttacaccagccccctctgctgttttgctaatttcagccaagcgaaagagctg
gtctataagataaaagaaggattaccctcagggacactcatcgggtccatgggctccgac
ctacacttggatttatccctcgatccccatgttttattcaatctgccccagaagaagccc
agtgatcagtatgtcactctgaacagcactacgggacagctgtttacgtctggcaaagag
atcgacagggagacgctctgccccgactcctcggagtacaaccagggctgcgtcctctcc
ctggatgttttcgttctaccccagcagtatttccagctggttaaggtcaaaatcttggtc
gaggacgttaacgataaccgtccgcgcttcccgacgggcgagattagggtttccgtcccg
gagaacacccaggtcaatgcgaggttcgcggtggagcagtcagcgacagaccccgatctg
gggtttcacggggttcagacttactggctggtcaacgactttggggtgttcactctggac
gtagaggagaacgaggggggtgagctgacacccttcctcatcgtgaccgacgagctggac
cgggaacgacgggaagaatacgtaacggatattatagcagaggacggtgggttgccacct
ctccttggcaccgccacgttaaggattataatcactgatgtcaacgataactgtcctcag
ttcacagagtcacaggtcaacgtgacgctctacgggaatacgactaaaggagagcacctg
tccaggttacacgccttcgacccagaccagggcgccaacgccgtgatcagctatgcgtac
agcgaccgcgttccccgggaggctagagctctgttccatctggaccggattaccggagtg
atcaaactggccggtcagatcaacaccgcaaccgggaagtactacaaactcactgtcctc
gccaacgggcctggttgcgtccctgccgtcgccacggtgacggtgcacgtgatccgggta
gcttccggtccgcctgttattatgccgcgctacatcgcggcggagaaagacggcgtggtc
aagatgaaggagtccgaaccgccgttttccccgatcgcgtttttcactgtgtcgaacacg
gaccagagaggaccagggacggaatgtctacttgaaggattcggcccgttccgactgaca
ccttacaaacggttgaagaacgagtatctgttagagacgacggagtcgctggaccacgag
cagaggcaggactacgagctgaccgtagtgctcaggaaccccagaggtctcgccattaag
accttcgttaagatcctggttctggatgagaacgacaacgcgccagtcttcaaacagtct
ctgtatgaggtctccgtggaggagaataaccctcccaacagcttcctgacccagctccag
gccacagaccaggacagtgaggccagaggagaggtcatctacacgctggggtcagacgcc
ccctccgtgttcctcctggagaggctgaccggcgtgctgaccgtgtccacatctctggac
cgagaagagaagcagacctacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagtggtcatcactgtgctggaccgcaatgacaacagcccgcgc
ttcatcaacaaagacttcacattctttgtgccagagaatttcccgggttttggcgagatc
ggcgtcctctcggtaacggacgcggacgcaggcgagaacggctgggtggccctctccatc
gtcaacggcagcgacatcttcgtgatcgacgcggggcgcggcgctctcagggcccgtacc
cctctggaccgggagcaacaggggacgtactacctctggatcgaggcagtcgacggaggg
gaaccctctctctcctgcctcaccgtggttaccgtcctcctccttgacgtaaacgataac
cctcccgtcgtcttgttcccccagtctaaccagtcctacatgctggtgttacctagcacc
ctaccagggacctccatcacagaggtttacgccgtggataaagacacaggaatgaacgcc
gttatcgcctacagcatcatcaagaggaagggtggcgagccgggatcgtttgatatcgac
ccggacacagggaacatcacgttgaagagagaactgagtgaccgcggtctctacagtcta
ctggttaaagtctcggaccacggtcaacccgagcctctccactccacggtcttggtcaac
ctcttcgtcaacgagacggtttctaacgagagctacatccagagtcttctcaccggggag
gcggctgagatccagatggaggagaagcagtggtacgtgggtaaactgacagagaggccc
ggcagggaggacctgttcccctgtcagccgctactcatagctctgtcagtgacctgtctg
ggactgttctgcatcgtcgtcacattgactgcttatatatgctgcaagaaactgaagaaa
tggaggaaacgtcaaatgaaaagactagaggttgaaatgcctttgaagatgaacggtgac
gtgcgcgacgcagatagaaagcggacggaaatctcaaacatttga
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