Oncorhynchus masou masou (cherry salmon): 135543185
Help
Entry
135543185 CDS
T10723
Name
(RefSeq) uncharacterized protein LOC135543185 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
135543185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135543185
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135543185
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135543185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
BLOC1_2
DUF4363
DUF16
5_nucleotid
DUF948
Vps53_N
LUC7
Motif
Other DBs
NCBI-GeneID:
135543185
NCBI-ProteinID:
XP_064826353
LinkDB
All DBs
Position
7:complement(9081469..9089578)
Genome browser
AA seq
611 aa
AA seq
DB search
MKKMLEATKRSADRVRDDTETVLSELQRSVERLQELVEGVMNQAGQEKVSEAQDVVDKLE
AEISELKRRDKDMKEVFRCEDNIHFLEICESLCSPFECNDLSCVVANPEATFEPVREAIL
NLRERVEDMCNVELGKITKTVNDTTLFTLGDKAKQNGGQKTGGFRSLFSGLGSKTTTTNN
NRPAAPTPTVSVAVRGPNSRGRVMSCGVGLRSQDVRSREEPRADRDRPRREKREPAREAA
PRPSTRSSPTQSRRKPARNSPTQSRRETRRRSPSPTPSRREPARPSPTPSRRETPRPEPT
TTPTHGAVTQATPASGAFTRMGSIASLFRSHRRATPAPGPVNNNTGGVNPGPVNNNTGGV
SPWGMGALTESQPEVNTSLFLDPPTPDPIMNQMPAFPALREIDISSIQAPEPRSREEFLQ
YACTLTLDTRTAHRRLTLSEGNTKATLQGAGQPYPDCPQRFDGWTQVLCQAPLSAQRCYW
EVDWRGKGSSMGVAYGALSRKGSDARAGLGYNAQSWSLELSDTCCTAMHDNEKRDIPVTY
SPRLGLFLDLNAGTLAFYSVAESMAHLHTFRANFTQPLYAAFGVGSGVGVGLDFALGQFS
QTSDSIKICPM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatgctggaggcaacaaagcgctcagcagacagggtacgtgatgacacagag
acagtgctgtcggagctccagcgctcagtggagaggctccaggagctggtggagggtgtg
atgaaccaggctgggcaggagaaagtaagcgaggcccaggacgtggtggacaagctggag
gccgagatctcggagctgaagaggagagacaaggacatgaaggaggtgttccgctgtgaa
gacaacatccacttcctggagatctgtgagtctctgtgcagcccgtttgagtgtaatgat
ctgtcgtgtgtggtggccaatccagaggctacgtttgagcctgtacgtgaagccatcctg
aacctacgggagagagtggaggacatgtgcaacgtggaactgggcaagatcaccaagaca
gtgaatgacacaacactgttcaccttaggagacaaagcaaaacaaaatggcggccagaag
acgggagggttcagaagtttgttttctggtctgggatccaaaacaacaacaacaaacaac
aaccgtcctgcagctcccacaccgactgtctccgtggcggttcgaggtcctaactcacgt
ggtagggtgatgtcatgtggtgtaggcctgcgctctcaggatgttaggagcagagaggaa
ccacgagctgacagagacaggccgaggagagagaagagagaaccagccagagaggcagcc
cccagaccaagcaccagatctagtcccactcagagtcggagaaagccagccagaaatagc
cctacccaaagtcgaagagagacgcgcagacgcagtcccagccccactccaagtcgtaga
gagccagccagacccagccctactcccagccggagagagacacccagaccagaacccacc
accacccctacccacggtgctgttacccaagccaccccagcctcaggagctttcacccgg
atgggatccatagcaagtctcttccgttcccatcgacgtgccacaccggcacctgggcca
gtcaacaacaacactggtggagttaaccctgggccagtcaacaacaacactggtggagtt
agcccatgggggatgggtgcactgacggaatcccaaccggaagtgaataccagccttttc
ctggatccgccgacccctgaccccatcatgaatcagatgccagctttccctgcattgagg
gagatagacatctccagcatccaggccccagagcccaggagcagagaggagttcctgcag
tatgcctgtaccctgaccctagacacgaggacagcccaccggcgtctgaccctgtcggag
ggcaacaccaaggccaccctacagggggcagggcagccctacccagactgcccccaacgc
ttcgacggctggacccaggtgctgtgccaggcccccctttccgcccagcgatgttactgg
gaggtggattggcgggggaaggggtcatcaatgggcgtggcttatggagccctgagcagg
aaggggtcggacgccagggcggggcttggctacaacgcccaatcatggagcctggagctg
tcggatacgtgttgcacggcaatgcatgacaatgagaagagggacatcccggtgacgtac
tcgccgcgtctggggttgttcctggacctcaacgcgggcaccctggcgttctatagcgtg
gcggagagcatggcacacctgcacacgttccgggccaactttacacagccactgtatgcg
gccttcggggtgggaagtggggttggtgttggactggacttcgctctgggtcagttcagc
cagacatccgacagcatcaagatctgccccatgtga
DBGET
integrated database retrieval system