Oncorhynchus masou masou (cherry salmon): 135543217
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Entry
135543217 CDS
T10723
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
omm04148
Efferocytosis
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135543217 (vps16)
04148 Efferocytosis
135543217 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135543217 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135543217 (vps16)
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135543217 (vps16)
Hops complex
135543217 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF740
Motif
Other DBs
NCBI-GeneID:
135543217
NCBI-ProteinID:
XP_064826403
LinkDB
All DBs
Position
7:complement(9862047..9876919)
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AA seq
835 aa
AA seq
DB search
MAFITANWNPLGEAFYRKIELYEMGWSLRDGLRECLVAAAPYGGPIALLRQPQRPSSSAR
PQLEIYSSSGANMASFPWKSGPVRQLGWTVCDDLLCVQEDGTVLIYDLFGAFKRHFSMGN
EVAQNQVLEAKVFHSPYGTGVAIVTGASRFTLATNIDDLKLRRLPEVPGLQGAPSCWAVL
TQDRQTKVLLANGADLYILDNTSCTPVTPPGLSPQACSIMNMAVSFSYKYLALFTDSGHL
WMGSANLKDKLSEVDTKVRTPPKQMVWCRRPKSQQPSVVIMWDRLLLVAGECTDTIQYPL
DEESVCVAELDGVRIVGGSRHELLQEVPSACQDIFKIASMAPGALLLEAHKEYEKSSQKA
DEYLREIKEQSVLGEAVRQCVEAAGYEHEPETQKTLLRAASFGKCFLSNYPPEPFVSMCR
DLKVLNSVREYTVGIPLTHTQYKQMTVQVLIDRLVYRKLYPLAIEICRYLKTPEYQGVSR
VLKHWACCKVQQKEEPDESIAHAVSVKLGEAAGISYSEIAARAYECGRTELAIKLLEFEP
RSGEQVPLLLKMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKHQEQDTLKDLFNQDDDHQELGNFYVKASYKEMKLEARLSLLQSAVDEYNKAKNE
FAAKATEEEMKLLRFQRRLDEEKGEALLGLSLQETLHALLTSNFHKQAEQLYRDFRVPDK
RYWWLKLTALAEKDDWEEMEKFAKSKKSPIGYLPFVEVCVKQHNKYEAKKYVSKVTPEQK
VKAHLAIGDLEGAAEAAIERRSEGEISTVLSRCSPTTDRALLERLNRARSTAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcatttataacggcaaactggaatccgctcggggaagcgttttacaggaagatcgag
ctgtatgagatgggatggagcttgagagatgggctcagggaatgtctggtggcagcagcc
ccatacgggggaccgatcgctcttctaagacagccacagaggccttcctccagcgcacgg
ccccagctggagatctattcctcctcaggcgcgaacatggccagcttcccgtggaagagt
ggcccagtgagacagctgggttggacagtgtgtgatgacctgctgtgtgtccaggaggat
ggcactgtcctcatctacgacctgtttggtgccttcaaaagacacttcagcatgggcaat
gaggtggctcaaaaccaggtgctggaagccaaggtgttccactcaccctatggaactggt
gtcgccatagtgacgggagcctcacgcttcaccctggccacgaacattgacgacctgaag
ctgaggagactcccggaagtcccaggcctccagggggcaccctcctgctgggcagtgctc
actcaggacagacagaccaaagtgctgctggccaacggagctgacctctacatactggac
aacacatcctgcacccctgtgacccctccaggcctctctccacaggcctgtagcatcatg
aacatggctgtgtcattcagctataagtacctggctctgttcacagactcaggacacctg
tggatgggctcagccaacctcaaggacaagctgagtgaggtggacaccaaggtgagaacc
ccgcctaaacagatggtctggtgcagaaggccaaagagccagcagccctctgtggtcatc
atgtgggacaggctcctactggtggccggagagtgtacagacaccatccaataccctctg
gatgaggagagtgtgtgtgtagcagagctggatggagtgaggatcgtaggagggtccagg
catgagctgctgcaggaggtgccctcggcctgccaggacatctttaaaatcgcctccatg
gctcctggagctttactactggaggcacacaaggagtacgagaagtccagtcagaaggca
gatgagtacctgagagagataaaggaacagagtgtattgggggaagcggtgagacagtgt
gtggaggctgctgggtatgaacatgaaccagagacccagaaaacactgctcagggctgcg
tcctttgggaagtgttttctcagtaactacccaccagagccgtttgtcagtatgtgtcga
gacctgaaagttctcaactctgtccgagagtacactgtggggatccccctcacacacaca
cagtacaaacagatgactgttcaggtcctcattgacaggttggtgtaccgtaagctgtat
cccctggccattgagatctgtcgctatctgaagacaccagagtaccagggagtcagcaga
gttctcaaacactgggcctgctgcaaggtccagcagaaagaagagcctgatgagtccata
gcacatgctgtcagtgtgaagctgggtgaggcagcaggaatctcctactctgagatcgct
gccagagcatatgagtgtggcaggacggaactggccatcaagttgttggagtttgagcct
cgttctggggagcaggtcccccttctactgaagatgaagaggagtcaactggccctgagt
aaagctatagagagtggtgacacagacctggtttacacggtggtgacatacctgaagaac
gagatgaacagaggagacttcttcatgacgctcagaaaccaaccggtagctctgagcctc
taccggcagttctgtaagcaccaggaacaggacacactgaaggatctgttcaaccaagac
gatgaccatcaggagctgggtaacttctacgtcaaggccagttacaaggagatgaagctg
gaggctcgcctgtctctgctgcagagtgctgtggacgagtacaacaaggccaagaacgag
tttgcagccaaggcgacagaggaggagatgaagctgctacgtttccagaggcgtctggat
gaggagaagggagaggctctgctgggcctgtctctccaggagactctgcatgcccttctc
acctccaacttccacaagcaggctgagcagctctacagggacttcagggtgccagacaaa
aggtactggtggctgaagctgaccgctctggcagagaaggatgattgggaagagatggag
aaatttgccaagagcaagaagtcccccatcggctatctacccttcgtggaggtgtgtgtg
aaacaacacaataagtacgaggccaaaaagtatgtttccaaggtgaccccagagcaaaag
gtcaaagcccacctggccataggtgatctggagggggcagccgaggcagctatagagagg
aggagtgaaggagagatcagcactgtcctgtcccgctgttctcccaccacagaccgagcc
ctgctggagagactcaaccgagccagatccactgctgccaaaaagtga
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