Oncorhynchus masou masou (cherry salmon): 135543368
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Entry
135543368 CDS
T10723
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135543368
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135543368
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135543368
NCBI-ProteinID:
XP_064826645
LinkDB
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Position
7:complement(15443103..15446290)
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AA seq
338 aa
AA seq
DB search
MYSMMMETDLHSPVPQTNTNSGHTGGSGNGNKVNQDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKD
KYSLAGGLLTGTGGGGVGLGMSPGVGQRLDSPGGHNGASAASYAHMNGWANGAYSGQVAA
AAAAAAMMQEAQLAYSQHPGSGHHHHSHHHHPHNPQPMHRYDMSALQYSPISNSQSYMSA
SPSGYGGITYTQHQSSGVASSGSMGTLGSLVKSEPSVSPPVSTHSRAPCPGDLRDMISMY
LPTGEAAGDPSVQSRLHALPQHYQSSTTGYLKKRTTLW
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatgatgatggagactgacctacactccccagtgccccaaacgaacacgaat
tcggggcacacgggaggatcaggcaatggaaacaaagtcaaccaagaccgcgtaaagaga
ccgatgaacgccttcatggtttggtcccggggccagcggcggaagatggctcaggagaac
cccaaaatgcacaactccgagatcagcaagcggctcggcgccgagtggaaggtgatgtcc
gaggcggagaagagacccttcatcgatgaggcgaagcggctacgagctatgcacatgaag
gagcatccggattataaatacagaccgagacggaagaccaagacactgttaaaaaaggac
aaatactctttggccggtgggctgcttaccgggacagggggtgggggtgtcggtctaggg
atgagccctggggtcggacagaggttagacagtcccgggggtcacaatggtgcgtctgct
gccagctacgcgcacatgaacggctgggcgaacggtgcgtactcggggcaggtggctgca
gctgcggctgccgcggccatgatgcaggaggctcagctcgcctacagccagcacccgggc
agcgggcaccaccaccactcacaccaccaccacccgcacaacccccagcccatgcaccgc
tatgacatgtcggccctccagtacagccccatctcgaactctcaaagctacatgagcgcc
tctccgtccggctacggcgggatcacctacacgcagcaccagagctctggtgtcgcctcg
tccgggtcgatgggcacgctgggctctctggtgaaatcggaaccgagtgtgagccctccc
gtctctactcactcgcgcgccccgtgtcccggggacttgagggacatgataagcatgtat
ttaccgacgggggaagctgcaggtgacccgtccgttcaaagtagacttcacgcgctgccg
cagcactaccagagctccacgacagggtacctaaagaaaaggacgacgttgtggtag
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