Oncorhynchus masou masou (cherry salmon): 135543392
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Entry
135543392 CDS
T10723
Name
(RefSeq) cohesin subunit SA-1-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135543392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135543392
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135543392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Cnd1
Motif
Other DBs
NCBI-GeneID:
135543392
NCBI-ProteinID:
XP_064826677
LinkDB
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Position
7:17098038..17146913
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AA seq
1262 aa
AA seq
DB search
MITSELPVLQDSSNESGAADTVSLSVSVSELEDPTDTKGKKKRGRPGRPPAANKKPRKSP
AEKATGGAKGRKANGVPQTNGEGGDPVTLFEVVRMGKSAMQSVVDDWIESYKQDRDIALL
DLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPLWKKFRYNF
CEFICVLIRQCQYSIIYDEYLHDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVAL
NLSIHQDNTQRQYEAERNKMAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFVH
RYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLY
TNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLITLILQGSEDALSNEDCENVYH
LVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEELAKRRGRSSPNGNLLRMLVLFFLESELH
EHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQESSLIELMVCTIRQAAE
AHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPMF
FDLDVYSAGRMEKHLDALLKQIRLVVEKHTETDVLEACSKTYSILCSEEYTIMNRVDIAR
SQLIDEITDRFTHSVEDLLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGSCYR
LLKAGIEQGAMPEQIAVQALQCSHYSILWQLVKITEGTPSKEDLVALRRVVKSFLAVCQQ
CLSNVNTPVKEQAFMLLCDLLMVFSHQLVSGGREGLEALVFNPDSTLQNELLTFILDHVF
IDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYN
DYGDIIKETLSKTRQSDKILCAKTLILSLQQLFNELLQDQGPTLDRTSSHVSGIKELARR
FALTFGLDQIKTREAVATLHKDGIEFAFKYQNPHGAEFPPPNLAFLEVLSEFSSKLLRQD
KKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGEDGDRMSVTSGASSKTSSIRSK
KGRTPIHKSKRIEEESSVEASWLRGNDSLQTPGALTTPQLTSTVLRENPRQAVDTHLPDH
DSEPGSENDYVHNPQMQMSWLGQQKMEDSRKDRTAMNYMKARNQTVRQTVRGLMEDDAEP
IFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTMP
MF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctctgagctgcctgtcctacaggactcgtccaatgagagcggagcggcagac
acagtgagtctgagtgtgagtgtgagtgagctggaggacccgacagacactaaaggcaag
aagaagagagggaggcctggcagaccaccagcagccaataagaagcctcggaagtcccca
gcggagaaggctacaggcggggctaaagggaggaaggccaatggggtccctcagaccaac
ggcgagggaggagaccccgtcactctgtttgaggtggtcagaatgggaaagagtgccatg
cagtctgtggttgatgactggatcgagtcgtacaagcaggacagagacatcgccttactg
gacctcatcaacttctttatccagtgttctggctgcaaaggcacggtgcgcatcgagatg
ttccggaacatgcagaacgctgagatcatcaggaagatgacagaggagtttgacgaggac
agtggggactaccctctcaccatgcccgggccgctgtggaagaagttccgctacaacttc
tgtgagttcatctgcgtgttgatacgtcagtgccagtacagcatcatctacgatgagtac
ctacatgacacggtcatatccctcctcacgggactatctgactcacaggtcagagctttc
agacacaccagcacactggcagcgatgaagttgatgacagcgttggtgaacgtggcgttg
aacctcagtatccaccaggacaacacccagagacagtatgaggctgagaggaacaagatg
gccggaaaacgggccaatgagaagctagagctgctgctgcagaagaggaaggagctccag
gagaaccaggatgagattgagaacatgatgaactctatcttcaaaggaatctttgtccat
cgctacagggatgctatagctgagatcagagctatctgtattgaggagattggagtttgg
atgaagatgtactctgacgccttcctcaacgacagctacctgaaatatgtaggatggacc
ttacacgaccggcaaggtgaggtccgtctgaagtgtctgaaggctctccagaacctgtac
accaacagagaactgtttcctaaactggagctgttcaccaaccgcttcaaggaccgcatc
gtgtccatgactctggataaggagtatgacgtggctgtggaggctattagactgatcact
ctcatcctgcagggcagcgaggatgcgttgtccaatgaggactgcgagaatgtctaccac
ctggtttactccgcccacagacccgtcgccgtggcagcaggagagttcctgcacaggaag
ttgttcagcagacatgacccccaggcagaggaggagttggctaagaggagagggaggagc
agccccaacgggaacctcctccgcatgctggtgctgttcttcttggagagtgagcttcat
gaacatgcagcctatctggtggactctctgtgggagagttctcaggagctgctgaaggac
tgggagtgtatgactgagttactgctggaggagcctgtacaaggagaggaggtgctgtca
gacagacaggagagttccctgatagagttgatggtgtgtaccatccggcaggcagcagag
gctcacccacccgtcggcaggggcactgggaagcgtgttctcacggcgaaggagaggaag
actcagatagacgacaagaacaaactgacagaacacttcatcatggccctgcccatgctc
ctgtctaagtaccaggccgactctgagaaggtggctaacctgctacagatccctatgttc
tttgatctggacgtgtacagtgctgggcgtatggagaagcacctagatgccttactgaag
cagatccgcctggtggtggagaaacacactgagacagacgtgctggaggcctgcagtaag
acctacagcatcctgtgttctgaggagtacaccatcatgaacagagtggacattgcccgc
tcgcaactcatcgacgagataacggaccgcttcacacactccgtagaagacctgctgcaa
gaggccgaggaggccgacgatgacgacatctacaacgttctgtctaccctcaagagactg
acggccttccacaatgctcatgacctgacgcggtgggacctgtttggtagctgctacagg
ttgttgaaggctggtattgagcagggggccatgccagagcagatcgctgtccaggccctg
cagtgttcccactactccatactgtggcagctggtgaaaatcacagagggaactcctagt
aaggaggacctggtggctctgaggagagtggtgaagtccttcctggctgtctgtcagcag
tgtctgtccaatgtcaacacacctgtcaaagaacaggccttcatgttgttgtgtgacctg
ctgatggtcttcagtcaccagttggtgtctgggggcagagaaggactggaggccctggtg
ttcaacccagacagcaccttacagaacgagctgctcaccttcatcctggaccacgtcttt
atagaccaggacgatgagaaccagagcatggaaggcgatgaggaggatgaagccaataag
atagaagctcttcacaagaggagaaacctgctcgcagccttcagcaaactcatcatctat
gacatcgtggacatgcccgctgctgcagacatcttcaaacactacatgaagtattataat
gactatggtgatatcatcaaggagactctcagtaagaccagacagagtgataagatcctc
tgtgccaaaaccctcatcctcagtctgcaacagctgttcaacgagcttctccaggaccag
ggtcctactctggacagaacgtcgtctcacgtcagcggcatcaaggagttggcccggcgc
ttcgcccttaccttcggcctggaccagatcaaaaccagagaggctgtcgcaacgctgcac
aaagatggtatagagtttgcctttaagtaccagaacccccatggtgcagagttccctcct
cctaacctggccttcctagaggtcctctcagagttctcctccaaactgctgcgacaggac
aagaagactgttcactcgtatctggagaagtttatgtcggagtctatgtctgagcgtcgt
gaggacgtgtggctgcccttaatctcctaccggaacagtctgctaacaggaggagaggat
ggggaccggatgtcggtaacgtcaggcgccagcagcaagaccagctccatccgcagcaag
aagggacggacgccaatacacaagagtaaacgcatcgaggaggagagtagtgtggaggcc
tcctggcttcgtggtaatgacagcctccagacaccgggggcgctaaccacccctcagctc
acctccaccgtcctcagagaaaacccacggcaggcggtggacacacacctacctgaccac
gactctgaacctggctcagagaacgactatgtacacaatccccagatgcagatgtcttgg
ctcggccaacagaagatggaggacagcaggaaggatagaacagccatgaactacatgaag
gcccgcaaccagactgtcagacaaactgttcgtggtctgatggaggatgacgcagagcca
atctttgaggacgtcatgatgtcatcgcgaggtcaactggaggacatgaacgaggagttc
gaagacaccatggtcatcgacctgcctccctccaggaacaggcgtgagagggcggagctc
agaccagacttcttcgactcagcagccatgatcgaggacgagtcgggtttcaccatgccc
atgttctga
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