Oncorhynchus masou masou (cherry salmon): 135543468
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Entry
135543468 CDS
T10723
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135543468
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135543468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
135543468
NCBI-ProteinID:
XP_064826824
LinkDB
All DBs
Position
7:complement(19469354..19519209)
Genome browser
AA seq
2027 aa
AA seq
DB search
MAQLLVPPGPDSFCRFCPDSLAAIERRIAEEEARKPRVDRCSDSNDDNEPKPNSDMEAGK
SLPFIYGDIPQGFVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATPACYILSPFNPLRR
IAIAVLVHSMFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLANDTTPDDRLNRTLGTPD
LNGTDFNGTDFNITRSVNWTEYINNESNYYYLLNRRDALLCGNGSGAGLCPEGFTCIKAG
RNPDYDYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLV
NLILAVVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAAAAATESHGEYSGR
GGPSSEASSGTSKLSSKSAKERMNCQKKRKERGEHKKFHKSESEDSIKRLSFRFSIDANR
LSYEKRCSSPNQSLLSIRGSLFSPRRNSQASLFSIRGRARDIVSDNDFADDEQSTFEDTD
SRRGSLFVPCRVECRSSTVSQTSLAPQRVLLPANGKMHCTVDCNGVVSLVGGTSVPTSPV
GLLLPEGTTTDSEMRLKKRRSRQASMAYLDEPDRARARAMSVASILTNTMEELEESRQKC
PPCWYKFANTYLIWDCCPMWLSFKGMVNTVVMDPFVDLAITGCIVLNTLFMAMEHYPMTT
EFNHVLSVGNLVFTGIFTAEMCFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEG
LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGK
SYKECVCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMM
VMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWAKVTIRQVI
QSLFLGGGATKRVKGESLEGGKTLDELHSSINGKGGNCISKHSLVEITKDPGGVYLKEGN
GRPGGGLGVGLGDSTENYPKEECNYMSFIHNPNLTVSVPIAVCESDFETTVTEDFSSDSA
SEEMSMGSKEKLPIEPQHLISSEGSSVDIGPPGDGAESVELEDEESENPENCFTDGCVLR
FQCCQVNVEEGKWKMWWTLRKTCFLIVEHNWFETLIIFMILLSSGALAFEDIYIEQRKTI
KIVLEYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALGYSE
LSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYHCVNTTNDETFPIEVVNNKSDCLALANDSARWKNVKINFDNVGAGYLALLQVAT
FKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFVTKQAFDIVIMIL
ICLNMVTMMVEEDDQTPEREKILHWINFVFIVLFTGECTLKMISLRHYYFTIGWNVFDFV
VVILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLL
APILNKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILENFS
VATEESAEPLSEDDFEMFYEVWEHFDPDATQFVEYDKLSDFADALDPPLRMAKPNHIQLI
KMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPITSTL
RRKQEDMSALVIQRSFRRYLARLALKKAAELYKEQPKGSMMYELEDKEVLVTGQFADNST
STEKMDITPTTASLPSYNSATNLEKDQYEKEKREKEKRDIDLREQNK
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccgcttctgtcccgactcg
cttgccgccatcgaaaggcgcattgccgaggaggaggcccggaaaccccgcgttgaccgc
tgtagcgacagcaatgatgacaacgagcccaagcccaacagcgacatggaggcagggaag
tctctccccttcatctacggggacatccctcaaggctttgtctccacccctctggaggac
ctggaccccttctactccaaccaaaagacatttatagtattaaatcgtggcaaggcaata
ttccgtttcaacgccactcctgcttgttacatcctaagccccttcaatcctctaaggaga
atagcaattgcagttttagtacactcaatgttcagcatgttgatcatgttcaccattctg
accaactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtac
acattcacagggatttacacattcgagtctctcattaaaatcttggcgagggggttctgt
gtggggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatttcc
atggcatatgtgacagagtttgtggacctgggtaatgtctcagccctcagaaccttcagg
gttctccgagccctcaaaactatatcagtcatcccaggactaaagaccatcgtgggtgct
ctgatccagtcggtcaagaagctctccgacgtcatgatcctcactgttttctgtctcagc
gtctttgccctgattggcctgcagctcttcatgggcaacctgaggcagaagtgtatccgc
aacctcgccaatgacacgacccccgacgaccgcctgaacagaactctgggaactccagac
ttaaatggaaccgatttcaacggaaccgatttcaacatcactcgctccgtaaactggact
gagtacatcaacaatgagagtaattactattacctcctcaaccgcagggacgccctccta
tgtgggaatggcagtggagccgggttgtgcccagagggattcacgtgcatcaaggcgggc
aggaacccagactacgactacacaagcttcgactcgtttggctgggccttcctgtccctg
ttcagactcatgacccaggacttctgggaaaacctctaccaacagaccctgcgagcggcg
gggaagccctacatgatcttctttgtgttggtgatcttcctgggttccttctacctggtc
aacctgatcctggctgtggttgccatggcctacgacgagcagaaccaggccaccatagag
gaggcagcccagaaggaggaggagttccaggccatgctggagcagctcaagagacagcag
gaggaggcattggttgccgcggcagcagccacagagagccacggagagtacagcgggaga
ggggggccctcctcagaagcctcctcagggacctccaaactcagctccaagagcgccaag
gagagaatgaactgtcagaagaagagaaaagagaggggtgagcacaagaagttccacaag
tccgagtcggaggacagtatcaagaggttaagcttccggttttcgatagatgccaaccgg
ctgtcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctcc
ctcttctccccgaggaggaacagccaagctagcctgtttagcatccgaggccgcgcccgc
gacattgtctccgataacgactttgccgacgacgagcaaagcacgttcgaggacaccgac
agccgccgcggctccttgttcgtgccttgccgtgtcgagtgccgctccagcacggtcagt
cagactagcctggcccctcagcgtgtcctgctgcccgccaacggcaagatgcactgcacc
gtggactgtaacggcgtcgtctcgctagtgggagggacctcggtgcccacctcgcctgta
ggactgctcctgcctgaggggacgaccactgactctgagatgaggctgaagaagaggagg
tctcgccaggcttccatggcctacctagatgaaccagacagagccagagccagagctatg
agtgtggccagtattctcaccaacaccatggaggagcttgaagagtccaggcagaagtgt
ccaccatgctggtataagtttgccaacacctatctgatctgggactgctgtcctatgtgg
ttgagtttcaaggggatggtcaacacggtggtgatggaccccttcgtggacctggccatc
accggctgcatcgtcctcaacaccctgttcatggccatggaacattatcccatgaccacg
gagttcaaccacgtcctctctgtcgggaacttggtgttcacgggcatcttcacggctgag
atgtgtttcaagctaatcgctctggacccctactactacttccaacagggatggaacata
tttgacggcatcatcgtcagtctcagtctgatggagctcggcctggccaatgtagagggc
ctgtctgtgctccgctctttccgattgttgagggtgttcaaactggccaagtcttggccc
accctgaacatgctgatcaagatcatcggcaactcggtgggagctctgggtaacttgaca
ctggtcctagccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaag
agctacaaggagtgtgtgtgtaagatctctacagactgcacactgccccggtggcacatg
catgacttcttccactccttcctcatcgtgttccgggtgctgtgtggggagtggatcgag
accatgtgggactgtatggaggtggctggccagagcatgtgcctcattgtttttatgatg
gtcatggttatagggaacctggtggttctgaatctgttcctggccctgctgctcagctcc
ttcagcgccgacaacctggcggccacggacgacgacagcgagatgaacaacctgcagatc
gctgtgggccgcatccagaggggcgtggcctgggccaaggtgaccatccgccaggtcatc
cagagcctgttcctcgggggcggagccaccaaacgggtcaagggggagtcactggagggg
ggtaagaccctggacgagctccacagctccatcaacggcaaggggggcaactgcatctca
aaacactcgttggtcgagatcactaaagatccgggtggggtctatctgaaggaggggaac
gggcggcccggaggggggttgggggtggggttaggagacagtacggagaattacccaaag
gaggagtgcaactacatgtcgttcatccacaaccccaacctgacggtgagcgtgcccatc
gcggtgtgcgagtcagactttgagaccactgtcacagaggacttcagcagcgactcggcc
tccgaggaaatgtcgatgggcagcaaagagaagctacctatagagccccagcaccttatc
tcatcggagggcagctcggtggatatcggtcccccgggggatggagctgagtcagtggag
ctggaggacgaggagtcagagaacccagagaactgcttcactgatggctgtgtgctcagg
ttccagtgttgccaggtgaacgttgaggagggcaagtggaagatgtggtggactttgagg
aagacgtgcttcctcatcgtggaacacaactggtttgagaccttaatcattttcatgatc
ctgctcagcagtggagctctggcgtttgaagacatttacatagagcagaggaagaccatt
aagatagtgctggagtacgcagacaaagtcttcacttatatcttcatcctggagatgctg
ctgaagtgggtggcctacggattcaagaagtacttcaccaacgcctggtgttggctggac
ttcctcattgttgatgtgtctctggtgagcttggtagccaatgcgttaggctactctgag
ctgagtgccattaaatcgctacgaaccctgcgggccttaagacccctgagggccttgtca
cggttcgagggcatgagggtggtggtgaacgccctcctgggtgccattccgtccatcatg
aacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaatctg
ttcgcagggaagtactatcactgcgtcaacaccaccaacgacgagacctttcccatcgag
gtggtcaacaacaagagcgactgtctggccctggccaatgacagcgcccgatggaagaat
gtcaagatcaactttgataatgtcggggccgggtacttggccttgttgcaagtggcaacg
ttcaaaggttggatggacatcatgtacgcagctgtggactctcgtaatgtggaacttcag
ccccaatatgaacagaacctctacatgtatctgtacttcgtcatcttcatcatctttggc
tccttcttcactctcaacctcttcattggtgtcatcattgacaacttcaaccaacagaag
aaaaagtttggaggtcaggacatcttcatgacagaggaacagaagaagtactacaatgcc
atgaagaagctcggctccaagaagccccagaagcctattcccaggccaacgaatgcattc
caaggctgtgtgtttgacttcgtaacgaagcaggcttttgacattgtcatcatgatcctc
atctgcctcaacatggtcactatgatggtggaagaggatgaccagacaccagagagggag
aaaatcctccactggattaactttgtctttatagtgctcttcactggggagtgtacgctc
aaaatgatatccctccgccattactacttcaccattggctggaacgtgtttgactttgtc
gttgtcatcctttcaatcgtaggtatgtttttatcagaattgattgagaagtactttgtt
tccccaacgttattccgagtcatccgacttgccagaatcggccgcatcctccgtctcatc
aagggcgccaagggcatccggacacttttgttcgccttgatgatgtcacttcctgccctg
tttaacattggcctcctgctcttcctggtcatgttcatctacgccatcttcggcatgtcc
aacttcgcctacgtcaagcacgaggcgggaatcgacgacatgttcaacttcgagacgttc
ggcaacagcatgctctgcctgttccagatcaccacgtcggcgggctgggacggcctcctg
gcgcccatcctcaacaagaaggagcccgactgcgacagccagatggagcacccgggcacc
ttgtaccggggaaactgtggcaacccgccagtggccatgttcttcttcgtcagctacatc
atcatctgtttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaacttcagc
gtcgccaccgaggagtcagccgagccgctgagcgaggacgactttgagatgttctacgag
gtgtgggagcacttcgacccggacgccacgcagttcgtggagtacgacaagctgtcggac
tttgcagacgctttggacccaccactgcgaatggccaagcccaaccacatccagctgatc
aaaatggatctgcccatggtcagcggggagcgcatccactgccttgacatcctgtttgcc
ttcaccaagcgtgtcctgggagagggcgaaggtttggacctcctccggggccagatggag
gagcgcttcatggcctccaacccctccaaagtctcctacgaacccatcaccagtaccctg
cggcgcaagcaggaagacatgtctgccttggtgatccagaggtcattcaggcgctacctg
gcccgactcgccctgaagaaagcagcagagctctacaaggagcagcctaaaggcagcatg
atgtatgagctggaggacaaggaggtgctggtgacaggacagttcgcggacaactccacc
tccacggagaaaatggacattacgcccaccaccgcctcgctgccttcgtacaacagtgcc
acaaacttggaaaaggaccaatatgagaaagaaaagagggagaaagagaagagagacata
gatctgagagagcaaaataaataa
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integrated database retrieval system
