Oncorhynchus masou masou (cherry salmon): 135543487
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Entry
135543487 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135543487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135543487
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135543487
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135543487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
135543487
NCBI-ProteinID:
XP_064826861
LinkDB
All DBs
Position
7:20283941..20319150
Genome browser
AA seq
685 aa
AA seq
DB search
MEALESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCASNEPVQSIGAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIDRVQRAASSGPLALLPHSGPNSPSEDAGRFALALIP
ASTAMTSPGTPPSHVQCQFCEQDPPQDAVKTCVTCEVSYCDECLRATHPNKKPFTGHRLI
EPMSDCHLRGLQCLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSDRYEKLKQA
LDSNLSHLVKRNNELEGLMGKLIQTCQHVEVNASRQEGKLMEECDLLIDIIQQRRQIIGT
KIKEGKAVRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSITERVSMA
TASSQVLIPEINLTDTFDTFALDFTKEKKLLESLDYLTAPSPPSIREELCTASYDTITVH
WTSDDEFTVLSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFI
VKAINQAGARSSEPGTLKTNSQPFKLDPKSAHKKLKISHDNLTVERDETASKKGHGQERF
TSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNN
SWVVRHNSKELAIEPSPHLRRVGVLLDYDAGSLTFYDAVGSQNLHTFHVSFAQPVCPVFN
VWNKCLTVLTGLPIPEHLEGLETQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctggagtcagagctgacttgcccaatctgcctcgagctctttgaggaccca
ctgctcctgccctgtgcccacagcctgtgcttcggctgcgcccatcgcatcctggtatcc
cactgcgcctccaacgagcccgtccagtccatcggagcattccagtgccccacctgccgc
tatgtcatctctctcagtccacagcgtggcctagaaggactgaaacgcaacgtcaccctc
cagaacatcatcgaccgcgtccagagggccgcctcctccggccccctggccctgctgccc
cacagcgggcccaactcccctagcgaggacgccgggcgattcgccctggccctgatcccc
gcctccaccgccatgaccagccccgggacgccgcccagccatgtgcagtgccagttctgc
gagcaggacccaccgcaggatgccgtcaagacgtgtgtgacgtgcgaggtgtcatactgc
gacgagtgcctgcgcgccacgcaccccaacaagaagcccttcacgggccaccgtctgatc
gagcccatgtcggactgccacctgcgggggctacagtgcctggagcatgaggaggagaaa
gtgaacatgtattgcgtcaccgacgaacagctcatctgctctctgtgcaaactggtagga
agacaccgagaccaccaggtggcggccttgagcgaccgctacgagaaactcaagcaagcg
ttggattccaacctgagtcatttggtcaagaggaataatgagttggaagggttgatggga
aagttgatccaaacctgtcaacatgtagaggtcaacgcatcgcggcaggagggaaagctg
atggaagaatgcgacctcctgattgacatcatccagcaaaggaggcagatcattgggacc
aaaatcaaggagggaaaggcggtccggatcaggaagctagcccagcagatctccaactgt
aagcagtgcatcgagaggtcctctgctctcatcacccaggccgaccagaccctgaaggag
acggaccacgcccgcttcctccagaccgccaagagtatcaccgaaagggtttccatggcg
accgcctcctctcaggtcctgattccagagatcaacctgacggacacgtttgacacgttc
gctctggacttcaccaaggagaagaagctgctggagagcctggactacctcacagcgcca
agtcctccgagcatcagagaagagctctgcacggcatcgtacgacaccatcaccgtccac
tggacctcagacgatgagttcacagtgctttcctatgagctccagtatgctatcttcaca
gggcaagccaacgttgtcagcctgtgtaactctgcagacagctggatgattgtgcctaac
atcaagcagaaccactacaccgtccacggcctgcagagcggcaccaagtacatcttcatc
gtcaaagccatcaaccaggcaggtgcccgcagcagtgagccagggacactcaaaaccaac
agccaacctttcaagctggaccccaagtccgcccacaagaagctaaagatctcccatgac
aacctgacggtggagcgcgacgagacggcatcgaagaagggacacggccaggagcgcttc
accagccagagtagctacggcgtcgttggcaacgtttacatcgacagcggacgccactac
tgggaggccctgattggaggaagcacatggtatgcggtgggcatcgcctataagtcggcc
cccaagcacgagtggatcggcaagaactcggcctcctgggtcctgtgccgctgcaacaac
tcgtgggtggtgcgtcacaacagcaaggagctggccatcgagccttcgccccacctgcgc
cgcgtgggtgtcctgctggactacgacgccggctcgcttaccttctacgacgccgtgggc
tcgcagaacctgcacacgttccacgtgtccttcgcccagcccgtgtgtcccgtcttcaat
gtgtggaacaagtgtctgactgtcctcacgggtctgcccatccccgaacacctagaaggg
ttggaaacccaggactga
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