Oncorhynchus masou masou (cherry salmon): 135543493
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Entry
135543493 CDS
T10723
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04082
Neuroactive ligand signaling
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135543493
04082 Neuroactive ligand signaling
135543493
04519 Cadherin signaling
135543493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135543493
Ion channels [BR:
omm04040
]
Ligand-gated channels
GABA-A
135543493
SSDB
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
135543493
NCBI-ProteinID:
XP_064826872
LinkDB
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Position
7:21622973..21656118
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AA seq
471 aa
AA seq
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MMALSTDKEDKMNSFSTMKHVWISVLLVCITCHVGRGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAG
SEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFG
VTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDG
KKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSETEVL
DPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacagacaaagaggacaaaatgaacagcttttctacaatgaaacac
gtgtggatctctgtcttgctggtgtgtattacatgtcacgtgggtcgtggccagaccaca
gcagaggcattgaaagaggcagaggcgaatgacaacatcaccatcttcacgcggatactg
gacggactgctagacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggag
tacaccattgatgtgtttttccgacaaagctggaaagatgagcgcctgtgtttcaaagga
cccatggagatgctgcctctgaacaacctcctggccagtaacatctggaccccagacaca
ttcttcctcaacgggaaaaagtctatcgcccacaacatgaccacgcccaacaagctactg
agactgaaggatgacggaacgctgctctacactatgaggttaaccatatcggcagagtgt
cccatgcagttggaggacttcccaatggatgctcatgcttgccctttgaagtttggaagc
tatgcctatccagtctctgaggtggtgtacctctggcaaaccggtgctgccaagtctgta
gtggtggcagaagacggatcccgtctcaaccagtaccacctgatcggccagaccgcaggc
tctgaggacatctacaccagtcgaggacagtacacagttatgatgtgtcacttctacctg
aagaggaagattggttactttgtcattcagacctacatgccctgtttcatgaccgtgatc
ctgtcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggaccgtctttggt
gtcactacagtgctgactatgactactctcagtatcagcgctcgcaactcgctgcctaag
gtggcctacgccacagccatggattggttcatcgctgtgtgctatgcgttcgtcttctcc
gcacttatcgagtttgccaccgtcaactatttcacgaagaggagctgggcgtgggatggc
aaaaaggccatggaggctcagcacccaaagaaaagggaccctatggtgctttctaagaag
cccaacaatgtctgtacagcaggagtgaactacacccccaacatcactaaggatatctct
atctccaccatctccaacagcacctccatacaactaagatcgtctgaaacagaagtcctg
gaccccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccggatagttttc
cctgtcctatttggaacctttaacctagtgtactgggctacttacctcaacagagaaccg
gtcatcaaaggagtaaacatattggctccaacatag
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