Oncorhynchus masou masou (cherry salmon): 135543521
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Entry
135543521 CDS
T10723
Name
(RefSeq) integrin beta-6-like
KO
K06589
integrin beta 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135543521
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135543521
09142 Cell motility
04820 Cytoskeleton in muscle cells
135543521
04810 Regulation of actin cytoskeleton
135543521
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135543521
04515 Cell adhesion molecules [BR:
omm04515
]
135543521
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
135543521
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135543521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
135543521
NCBI-ProteinID:
XP_064826925
LinkDB
All DBs
Position
7:complement(22989376..23002020)
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AA seq
786 aa
AA seq
DB search
MGTAVLLLLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYLLLERGCPQDQVEFPVTTSEVLRDQPLGKKTGNTNSTEISPQKMALKLRTGSEVTFQV
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELDNPCRSVDESCLPTFGYKHVLPLTSSTEKFNNIITKQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVDNNILLIFAVTENQKHNYENYASFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFTAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACQQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESVQSSNCKASGASESCSGQGECYCGQCVCHPSGFGRVYGAYCECDDFS
CVRFRGLLCGGHGDCDCGECVCHSGWIGEYCNCSSSRDTCVSEDGALCSGRGKCVCGKCV
CSMPGASGDTCERCPTCGDSCSSARTCVECHLQAEDEATEECVQRCSVPHVFINNSTEYD
ESRSTLCTLKSENNCLISFSVVAGDAGSTVYNLKMYDCPEPPNIAMIVLGVSLSILTIGL
ILLGVWKLLISVHDRNEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSAGGQKVDI
HSMDGY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggactgctgtacttctgctcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagtgcagtgacttgtgacgagtgtctccagcttggtccccactgt
gcatggtgcacacaagagaatttcacggactcctttttaatcagtgagcgatgtgacacg
ccgtacctcctcctagagagaggctgtccccaggaccaggtggaattcccagtgaccact
tccgaggtcctccgggaccagcctctcgggaagaagacaggaaataccaacagcacagag
atatcaccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccaggtc
agtgtgcagcagacagaagactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgatgacctggagatgattaaagacttgggctccaccctgtccaaggagatg
gcaaagctcaccagtaaattcagacttggatttgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggataacccttgtaggagtgtggatgagagc
tgtctgccaacgtttggatacaaacacgtcctacccctcaccagcagcacagagaagttc
aacaatatcatcaccaaacagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgctggtgtttgtgagcgacgctgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggacaataat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcaagt
ttcattcctggcgccacggtgggggttctggagtcagattcaaggaacatcctggaactg
attgtgacggcgtataaagagctgcggtctgagatagagctggaggtgctaggagacaca
gaggatctacagatctccttcacagcgatctgtcaggatgggacggtactacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaacgtgactgtagaactc
tctgagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgctcctgtgcctgtcagcagacccccgagcccaac
agcagccactgcagcttgggccggggatctctggagtgtggctcctgcctgtgtgatccc
gggtacatgggttccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gccagtggtgcttcggagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctggtttcggacgcgtctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgagggttactctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcatagcggctggataggggagtactgtaactgcagcagcagcagggacacgtgt
gtgtcggaggacggagcgctgtgcagcgggcgggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagacacctgtgaaagatgccctacctgtggagactcc
tgtagctcagctagaacctgtgtggagtgtcatctacaagcagaagatgaggccacagag
gagtgtgtccaaaggtgcagcgtccctcacgtcttcatcaacaattccacagaatacgat
gagagccggtccacgctgtgtaccctaaagagtgagaacaactgcctcatctctttcagt
gtggtggctggagacgcagggagcactgtgtataatctaaagatgtacgactgtcctgaa
ccccccaacatagctatgatagtactgggggtctctctgtccatcctcaccatcggcctc
atcctgctgggggtgtggaagctgttgatctcagtccacgaccgcaatgaggtcgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacatcaacgtttaaaaatgtaacttacaaaagcgcagggggacagaaagttgatatt
cattcaatggatggctactga
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