Oncorhynchus masou masou (cherry salmon): 135543544
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Entry
135543544 CDS
T10723
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135543544
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135543544
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
135543544
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
135543544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
Sec7-like_HUS
TOR1L1_N
Adaptin_N
Cnd1
RTP1_C1
HEAT_DAAF5
MMS19_C
ParcG
Paxt-1_C
MMS19_N
KH_DEAH11_1st
ZapG-like
Motif
Other DBs
NCBI-GeneID:
135543544
NCBI-ProteinID:
XP_064826959
LinkDB
All DBs
Position
7:23356572..23426871
Genome browser
AA seq
1562 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDMDKSQVLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILSALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICHLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSLGKKTVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPAMQLFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTGSCQSKSVAVRRRSFEFLDLLLQEWQTSSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHCHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLHASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAASSRGPSTLGSLQRSRSDV
DVNAAATACAKTRMPPVPSSPAAFSAASALPPGSYASLGRVRTRRTSSGSGVGASPSVTD
SRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRIPRATGATTPSDRRPKVPRSHGCSRDTS
PDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRSTSALHSAESVG
HSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPVRRRYESPGIY
SDDDANSDASSACSERSYGSRNGGPPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNL
LVSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFITLHREDVQDWLFVLLTQL
LKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILRYIE
CLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKSFHHSWAGEELSGRPSTTVAPL
PGEGNVEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLHSHLRNSSNTGV
ASPSSTMGRTPPPPRHPSSRSSPLTSPTNCSRGGALSPSMLEYDTENLNTDQIYSSLRGV
TEAIQNFSFRSQEDLMEPGRGKREDTPGVGTASHSGADVVEGPGGRTALDNKTSLLNTPS
PRSFSGPRGRDYNPYNYTDTISAYDKAALKETVYEDDVEQLRDGRQECGGENKMLHTKNS
SPSEQLELAGELLKELSNPSERPEERRGALVELLKIAREDSLAVWEEHFKTMLLLLLETL
SDQDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEESASTLA
GSIHPEQCIKVLCPIVQTADYPINLASIKMQTKVIERITKESLHQLLPDIIPGLLQGYDN
TESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDIS
SY
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggaacaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctggacatggacaagtcccaggtcctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttattgggaatggacatactctcagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtcagggaccaggaccaagctcttctactaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggacccgggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtcatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctaccgacacgtcggggag
cgggtgcggatggacctggggaaaaagggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaaagatcggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcggtggacggtgggcggtcctcctcttctaagggcccgtcg
ttagggaagaagacagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgcccgctatgcaacttttctctaacagggaaatggag
gacgccatgaccaagatcagggaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggagcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aggtttgaccactgtgctgagtccatcatgcccactctcctaaccctggtctcgaactcg
gccaaggtcatggccacatccggaatcgctgtcatacgactcatcatcagacatacacac
taccctcgtctcattcctatcgtgaccggcagctgccagtccaaatctgtggccgtgaga
aggcgcagttttgagttcttggacctcttgctgcaggagtggcagaccagctctctagag
aggaatgtagctgttttgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccactgccacttcagccgggaggcg
gagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccatgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacaccgtgaccaggacgaaa
gcggcttcctccagaggtccctccaccctgggctctctacagcgttcccgtagcgatgtg
gacgtgaacgctgccgccaccgcttgtgccaagaccaggatgcctcccgtgccctcctcg
ccggccgccttcagcgctgcctccgctctgccacccggctcctacgcctctcttggccgt
gtgcgtaccaggagaacgagttcggggagcggcgtgggggcgagcccctctgtcacagac
agtagggggagaagtcgagccaaaatggtgtcagtgtctcaacctggtagtcggtctggc
tcccctggtcgtcttctgagccacacatacggcaggatccccagggcaactggagcgaca
acgccatcagacaggaggcctaaagtcccccgcagtcatggctgcagccgagacaccagt
ccagacagatcaggcctggcgaggagtcgtatcccccggcccagcatgagtcagggctgc
agcagggacacctctagggagagcagccgggacaccagccccgctcggggattctctcct
ctggcgtccagacgtgtctcccgctccaccagtgctctccactcggctgagtctgtgggc
cactcagagcgtctaggtctggcccaccaggcccgtatctcagcctctgtcaacgccatg
aggatcctcaacaccgggaccgaggtggaggcagctgtagccgacgccctgttactagga
gacgccaggaacaacaagcggcggccagtcaggcggcggtatgagtccccgggcatctac
tcagacgacgacgctaacagcgacgccagcagcgcctgctctgagcgctcgtatggctcg
cggaacggcggcccgccccactacatgagacagacggaggacgtggccgaggtgctgaac
cactgtgccagttccaactggtctgagaggaaggaggggctgctgggactacagaacctg
ctcgttagccagagaattctcagtcgtgtggagctgaagcggttgtgtgagatcttcact
aggatgtttgctgacccacacagcaaggtgttcagcatgtttctggagaccctggtagac
ttcatcaccctgcacagagaggacgtgcaggactggctgtttgtcctgctcacccagctg
ctgaagaagatgggagctgacctcctgggttccgtacaggccaaggtccagaaggctctg
gacgtcaccagggactcgttcccgttcgaccagcagtttaacatcctgatgcgtttcatc
gtggaccagacccagacccccaacctgaaggtcaaggtggccatcctgaggtacattgag
tgcctggcccgtcaaatggaccccgcagactttgtcaactccagcgagacacgtctggcc
gtctcccgcatcatcacctggaccacagaaccaaagagctccgacgtccggaagagcttc
caccatagctgggcaggtgaggagttgtcaggcaggcccagcaccaccgtagcccctcta
cctggagaggggaacgtggaggagaggtgcaagcaggcggcccaggtggttctgatcgcc
ttgtttgagctgaacaccccagagttcaccatgctgctgggggccctgcccaagaccttc
caggacggagccactaaactgctgcatagccacctacggaactccagcaacaccggagtg
gcttctcccagtagcactatgggacggactcctcccccgcctcgccaccccagcagtcgc
agcagccccctcacctctcccaccaactgctctcgtgggggcgcgctctctcccagcatg
ttggagtacgacacagagaacctgaacaccgatcagatctatagctccctgcgaggcgtc
actgaggccatccagaacttcagcttccgcagtcaggaggacctcatggagccgggcaga
ggcaagagagaggacacgccgggtgttggaacagcatcacactctggtgccgacgtagtg
gaggggcccgggggtcgcacggccctggacaacaagacctccctactcaacaccccctcc
ccgcgttccttctccgggccccggggccgcgactacaacccctataactacacagacacc
atcagcgcctacgacaaggctgccctgaaagagacggtgtacgaggacgacgtggagcag
cttcgagatggtcgccaagagtgtggtggagaaaacaagatgctgcacaccaagaacagt
tccccttcggagcagctggaactggcgggtgagctgctgaaggagctgtctaaccccagt
gagaggccagaggagaggaggggagccctggtggagctgctgaagatagcccgggaggac
agcctggcagtgtgggaggaacacttcaaaaccatgctgctcctgctgctggagaccctg
tcagaccaagatcacaccatccgggccctggcactacgagtgctgaaggagatcttacgt
aaccagccggcccgcttcaagaactatgcagagctcaccatcatgaagactctggaggca
cacaaagactcccacaaagaggttgtgcgggcagcagaggagtcagcctccaccctggct
gggtccatccacccagaacagtgtatcaaggtgctgtgtcccatcgtccagacagctgac
taccccatcaacctggcttccatcaagatgcagaccaaggtgatcgaacgcatcaccaag
gagtccctgcaccagctgctgcctgacatcataccaggactactgcaggggtatgacaac
acagagagcagtgtgaggaaggccagtgtgttctgtctggtggctgtctactctgtcatc
ggtgaagagctgaagccctacctggcccagctcacaggaagcaagatgaagctgctgaac
ctgtacataaagagagcccagacgtccaccagcaacagcagcagctcttcagacatctcc
tcatactaa
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