Oncorhynchus masou masou (cherry salmon): 135543697
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Entry
135543697 CDS
T10723
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135543697
03041 Spliceosome [BR:
omm03041
]
135543697
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135543697
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135543697
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Flg_new_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
135543697
NCBI-ProteinID:
XP_064827139
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All DBs
Position
1:complement(38550913..38567880)
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AA seq
391 aa
AA seq
DB search
MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEH
RHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSSHFHVFVGDLSPEITTDDVKVAFG
PFGRISDARVVKDVATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP
APKTTYETNTKHLSFDEVVNQSSPSNCTVYCGGVGTGLTEQLMRQTFSPFGQIMEIRVFP
DKGYSFVRFTSHEGAAHAIVSVNGTSIEGHMVKCYWGKETTDMMSPMQQVQQVPQNKVGF
AAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFNHLPASAGWTGVSAL
SNGGVMEATQGLNGSMLANQAGMGATGYPTH
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacttgtccagg
gatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgt
aaaatgattgttgatactgcaggcaatgacccatactgttttgtggagttctatgagcac
aggcatgctgctgcatcactggctgccatgaatggacgtaaaattatgggtaaggaggtt
aaagtcaactgggccacaacaccaagcagtcagaaaaaagacacaagcagtcatttccat
gtctttgttggagacctcagcccagaaattaccacagatgatgtaaaagtggcctttggt
ccatttgggaggatatcggatgctcgtgtggtcaaagatgtggcaacgggaaagtctaaa
ggctatggctttgtctctttcttcaacaagtgggatgcagagaacgccattcagcagatg
ggtggtcaatggctaggcggcagacagatcaggaccaactgggccacgagaaagccccca
gctcctaaaaccacctatgaaacaaacacgaagcacctgtcctttgatgaggttgtgaac
cagtccagccccagtaactgcactgtgtactgtggaggagtcggcaccggtctaacagaa
caattgatgagacagaccttctccccctttggacaaatcatggaaatccgtgtcttccca
gacaaaggatactcttttgtacggtttacctctcacgagggagcagcccatgccattgtg
tctgtgaatgggacttcgatagagggccatatggtgaagtgttattggggtaaagagacc
acagacatgatgagtcctatgcagcaggtgcaacaagttccccagaacaaagtgggcttt
gcggcccagccctacggccagtatgcccagtggtacggcaatgcccagcagattggccag
tacgtccccaacgggtggcaggtacccacctatggggtttacggccaggcccaggcctgg
aaccagcagggttttaatcacttaccggccagtgctgggtggacaggtgtgagtgccctc
agtaacggtggggttatggaagctacacagggattgaatgggagtatgttagcaaaccag
gccggtatgggagccactggataccccacacactga
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