Oncorhynchus masou masou (cherry salmon): 135543806
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Entry
135543806 CDS
T10723
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
omm
Oncorhynchus masou masou (cherry salmon)
Pathway
omm04137
Mitophagy - animal
omm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135543806
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135543806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135543806
03009 Ribosome biogenesis [BR:
omm03009
]
135543806
04131 Membrane trafficking [BR:
omm04131
]
135543806
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135543806
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135543806
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
135543806
Membrane trafficking [BR:
omm04131
]
SNARE
SNARE associated proteins
Others
135543806
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135543806
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135543806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
Vps4_C
AAA_33
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_2
TIP49
AAA_lid_PRS2_C
nSTAND3
ARC_lid
AAA_14
AAA_28
Lin0512_fam
RNA_helicase
Parvo_NS1
IstB_IS21
ResIII
Motif
Other DBs
NCBI-GeneID:
135543806
NCBI-ProteinID:
XP_064827211
LinkDB
All DBs
Position
8:31184275..31302796
Genome browser
AA seq
629 aa
AA seq
DB search
MKNNRNRWTGDAQSFDGAIIIRSKNDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAK
MDELQLFRGDTVLMKGKKRRETVCIVLSDDTCSDEKVRMNRMVRNNLRVRLGDVISIQPC
PDVKYGKLIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV
VETDPNPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLR
HPALFKAIGVKPPRGIPLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLSGESESN
LRKAFEESEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMA
ATNRPNSIDPALRRFGRFDREVDIGILDATGRLEILQIHTKNMKLSDNVDLEQVLVPVNI
HQLCTAIEEEWDNILQAKINSLINSMRRPDIIDPAILRPGRLDQLIYIPLPDEKSRINIL
NANLRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERGLQTNP
LAMEVEDDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSS
APGAGPSQGSAGGSGGTFFNEDNDDDLYG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataacagaaatagatggaccggagatgctcagtcatttgatggggcgatcata
attagatcgaaaaatgatctatccacagcgattttaaagcagaagaccaggcccaaccgg
ttggttgtggatgaatctctcaatgaggacaacagtgtggtttctctgtctcaggcaaag
atggatgagttgcagctgttcaggggagacacagtgctgatgaaaggaaagaagagacgg
gagacggtatgcatcgtgctctctgacgacacctgctccgacgagaaggtccgcatgaac
agaatggtccgcaacaacctgagagtccgcctgggagatgtcatcagtattcagccctgc
ccagatgtgaagtacgggaaactgatccatgttctgcccattgatgacactgtagagggg
atcacagggaacctgtttgaggtctacctcaagccctacttcctggaggcctacaggccc
atcaggaaaggggacattttcctggtgaggggaggcatgcgtgcggtggagttcaaggta
gtggagacggatcccaacccctactgcatcgtggccccagacactgtcatccactgtgag
ggcgagcccatcaaacgagaggatgaggaggagtctctgaatgaggttggctatgatgac
attgggggtgtgaggaagcagctggcccagattaaggagatggtggagctgcccctgaga
cacccagcactgttcaaggccatcggcgtcaagcctccaaggggtatcccgctgtatgga
ccccctggaacaggaaagacactgattgcacgtgccgtggccaacgagaccggagccttc
tttttccttatcaatgggcctgagatcatgagtaaactgtctggagagtctgagagtaac
ctgaggaaggcctttgaggagagtgagaagaatgcccccgccatcatcttcattgacgag
ctggacgccattgcaccaaaaagagaaaagacacacggtgaggtggagaggcgcattgtg
tcccagctcctcacactcatggatggcctaaagcagcgcgctcacgtcatcgtcatggca
gccaccaacaggcccaacagcattgaccccgctctgaggagatttgggcgttttgacagg
gaggtggacatcggcatccttgatgccacaggcagactggagatcctccagatacacacc
aagaacatgaaactgtccgacaacgtggacctcgagcaggttttagttcccgttaatatc
catcaactttgcactgccattgaagaggagtgggacaacatcctacaggccaaaatcaac
agtctgataaactctatgcgaaggcctgatatcatcgacccggccatcctgaggcccgga
agactggaccagctcatctacatccccctgccagatgagaagtcccgcatcaacatccta
aacgccaacctcaggaagtcacccatcgccaaggatgtggacttggatttcctggccaag
atgaccaatggtttctctggcgctgacctgacagagatctgccagagggcctgtaagatg
gccatcagggagtccattgagaatgagatcaggagggagagagggcttcagaccaacccc
ttagccatggaggttgaggacgacgaccctgtcccagagatccgtaaagaccactttgag
gaggccatgcgtttcgcccgccgctcagtcagcgacaacgacatccgcaaatacgagatg
ttcgcacagacattacagcagagcagaggattcggcagcttccggttccccactagctct
gcgccaggcgctgggcccagccagggctctgctggtggcagcggtggtacattcttcaat
gaggacaacgacgacgacctctatggttaa
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