Oncorhynchus masou masou (cherry salmon): 135543992
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Entry
135543992 CDS
T10723
Symbol
vps36
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135543992 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135543992 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135543992 (vps36)
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
135543992 (vps36)
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135543992 (vps36)
Exosomal proteins of colorectal cancer cells
135543992 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
G1_gp67_C
DMAP1
Xre-like-HTH
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
135543992
NCBI-ProteinID:
XP_064827379
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All DBs
Position
8:complement(2011653..2040911)
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AA seq
388 aa
AA seq
DB search
MDRFTWSNGLLEMNETLVIQQRGVKLYDGEDKAKLDVGIALLSTHQLIWRDLKNHECCIA
IPLSQIIYFEEQAAGIGKSAKIVVHLHAXPANKEPGPYQQSKFSYFKLSFKEHGQIEFFR
RLTEELSQKRWESTPMSQPIPTATNSQTGRTRAVGIVGIERKIEERRKETEKNISEAFED
LSKLMVKAKEMVELSRSTANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHLQLAKQLGDILLAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKQP
LRLRIFDSGVMVVQLQSHSEEEMISSALDNVTDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLFNSQALM
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacagattcacatggtcaaatggtcttctggaaatgaatgaaacattggtgattcaa
caacgaggtgtcaaactttatgacggagaagacaaggccaagttggatgttggaattgct
ctgctgagtacgcaccagttaatatggagggacctgaagaatcatgaatgctgcatagcc
atacccctttctcagatcatctactttgaggaacaagctgcgggtatcggaaagagtgcc
aagatagtggtccacctgcatgctntcccggccaataaggagccaggaccctaccagcag
agcaagttctcctacttcaaactgtccttcaaagagcatggacagatagagttcttccgg
aggctgaccgaggagttgagccagaagagatgggagagtacgcccatgtcacaacccatc
cctacggcaaccaactcacagacaggaaggacgcgagcggtggggatcgtcggcatcgag
aggaagatagaggagaggaggaaagagacagagaaaaacatctcagaggcctttgaggac
ctcagtaagctgatggtgaaggcgaaggagatggtggagctgtccaggtccaccgccaac
aaaatcaaagacaagcagggagacatcacagaggatgagactatccggttcaaatcctac
ctgctcagtatgggtatagccaaccccgttaccagggagacgcacggctcaggtacccac
tatcacctacagctggccaagcagctgggagacattctgctggcaccactagaggagcgt
ggtgggatgatggctctgactgaagtgtactgtctggtcaacagagctaggggaatggag
ctgctgtctccagaggatttggtgaatgcctgtaagatgtttgagtcgctgaagcaacca
ctgaggttgcgtatctttgacagtggtgtgatggtggttcagctgcagtcccacagtgag
gaggagatgatctcctcggccctggacaacgtaactgataaaggctctctgacagctgag
gagtttgccaagctgctcggcctctctgttcttctgtctaaagaaaggttgttactagca
gagaagatgggtcacctgtgtagagacgactccgtggaaggactacggttctaccccaac
cttttcaacagccaggctttgatgtag
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