Oncorhynchus masou masou (cherry salmon): 135544027
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Entry
135544027 CDS
T10723
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135544027 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135544027 (exosc8)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135544027 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135544027
NCBI-ProteinID:
XP_064827447
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Position
8:complement(6922504..6940488)
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRTTTLNIGSISTADGSALVKIGNTTVMC
GIKGELTSPAVDAPSKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSAVVQ
KEDLCIVKGKLCWVLYCDIVCLDYDGNLLDACLIALLAALKNARLPEVTVNKETEVPELT
LENRRGLDIHKHPVGASFIVFDDSIMIVDPTAEEESLSTATITVVTDEEERLCALHKPGG
TSLSGEKLQDCISRATTRHREVRKLIDKVTQSDKTPK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaactgctgagcccttggaatatcaccggagttttctgaaagag
aactgccgtcctgatggaagggagctgggtgaattcagaaccactacattgaatataggt
tctatatccacagcagacggctcagccctggtgaagattggaaacaccacggtcatgtgt
ggcatcaaaggggaactgacgagcccggcagtagatgctcctagtaaaggctacattgtc
cccaatgtagacctgcctcctctgtgttcgtctcggttccgtcctggaccgccgggagaa
caggctcaggccgccagccagttcatcgctgatgtcatagagagctctgccgtcgtccag
aaagaggacttgtgcattgtgaaaggaaagctgtgttgggtcctgtactgtgacattgtg
tgtctggactatgatggcaacttgttggacgcatgcctcatcgccctgctggctgctctt
aagaacgcacgtctcccagaggtgacagtcaacaaagagacagaggttcccgagttgacc
ctggagaacaggagaggtctggacatccacaaacaccctgtaggggcctctttcattgtg
tttgatgactctataatgattgtcgaccccaccgctgaggaagagagcctgtctacagcc
acaatcacggtggtaacggacgaggaagagcgactctgtgccctccacaagccaggtggt
acgtcattatcaggtgagaagcttcaggattgtatcagccgagccacgacgagacacagg
gaggtccgcaaactcatcgacaaagtcacacagagcgacaagacaccgaaataa
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