Oncorhynchus masou masou (cherry salmon): 135544072
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Entry
135544072 CDS
T10723
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135544072 (supt6h)
03036 Chromosome and associated proteins [BR:
omm03036
]
135544072 (supt6h)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135544072 (supt6h)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135544072 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
S1_RRP5
HHH_9
HHH_3
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
135544072
NCBI-ProteinID:
XP_064827510
LinkDB
All DBs
Position
8:complement(11032290..11069525)
Genome browser
AA seq
1749 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQAFMDDEEEEEELNTEDQDEHGNLMGLIDDDVDE
DEEEEEKKSGGAGSGSDSEDEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDR
VKTMDDDEDDEKDQIADEIFHRGDDEDGEGELEEGETVDPPLRRHGERLDEEEEEEGEEE
SDIDDFIVDDDGQPITKRRSKKFSGYTDAALQEAQEIFGGDFDFAEFDADGAYEQGEEEE
EDQDEEGWDRPKKPTKRRVGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIP
VKPAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGATTNFSRKGPSTIAKIKEALNF
MRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWCQLKSRKQNLTRLFRRMQGYQY
EQISADPDKPLADGIRPLDTADMERLKDVQSIDELSDVYSHFLLYYGRDIPKMQNAAKAA
SKKKKKKKKIEVNEEGEEEEVEEEEEVEEEKGPDLKLASRRDMYSICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFNSPEVVLEGTRYMVAMQIAREP
LVRHVLRQTFQERAKINIKPTKKGKKDMDEAHFGYSFKYLKNKPVKELNGDQFLKMCQAE
EEGLLTIDICIDLLGVKGVAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQF
LYPQMAKELKNKLIAEAKENIIKSCCRRLYNWLKVAPYRPDQQAEEEDDDLMDESQGKGI
RVLGVAFADSRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWKEDERDKKLQDIENLKKF
LTSKKPHVVAVAGENRDAHMIMEDIKRTVSELEQESSLPAVGVELVDNELAMLYMNSTKS
QTEFRDYPPLLRQAVSVARKIQDPLVEYAQVCSSDEDILCLKLHPLQEHVVKEDLLSALY
CEFINRVNEVGVDVNRAISHPYTQSLVQFVCGLGLRKGSHLLKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRV
PYRAPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCP
FCQQDNFPELSEVWNHFDSGSCPGQAIGVRARMDNGVQGFIPTKFLSDKVVKHPEERVKV
GMTVHCRIMKIDIEKFNVDLTCRTSDLMDKNNEWKLPKDSYYDFDTETEDTKTEEERKKK
QQRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQ
HVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMAAFARDLLGHKYFQDCNGGD
RKKMEELLIRSKKEKPTFIPYFVSACKDLPGKFILGYQPRGKPRVEYVTISPDGFRYRSQ
MFPTVNGLFRWFKDHFQEPVPGITPSSSSRTRTPASVNATPANINIADLTRAVSALPRNM
TSQMFSAIAAVTGQGQGQNANTTPAQWNSSQYGYTGGSSGGGGGSSSAYHVFATPQQPMA
TPMMTPSYSYTTPSQQTMGTPQYPSTPQSSHSHGHTQSNQGHSSHQGPSSNTPSSSSRGR
TPQQQPKSSGSTAVDWGKVAEQWLQEKEAERKKQKTPRMTPRPSPSPMIQSTPMSIAGDA
TPLLDEMDR
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgatagcgaggctgaggagtcggaggaggagtttgaagagaaagac
ctgaagcctaaaaagacccaggcgtttatggatgatgaggaagaggaggaagagttaaac
acagaggaccaggatgagcacgggaacctgatggggctcatcgacgatgatgtggatgaa
gatgaggaagaggaagagaagaaaagtggaggagcaggcagcggcagcgactcagaggat
gaagtcagacacagacgcaagaaacgcaactatgatgactacctggatgatgatgatctg
gatctcattgaggagaacttgggagtcaaagtcaaaaggaggaagaagaagtatgaccgt
gtgaagacgatggatgatgatgaagatgacgagaaggaccagatcgcagacgagatcttc
cacagaggagatgacgaggacggagagggggagctggaggagggagagacagtcgacccg
cccctacgtcgccatggtgaacgcctcgacgaagaagaggaagaggagggagaggaggag
tcggatattgatgactttatcgtggacgacgatggccagcctatcaccaagaggagaagc
aagaagttctcaggatacacagatgcggccctccaggaagctcaggagatcttcgggggc
gactttgactttgcggagttcgacgccgacggtgcttatgaacagggtgaggaagaggag
gaggaccaggatgaagagggctgggaccggcccaagaagccaacgaagaggagggtgggg
aggaagagcatcttcgagctctacgagcccagcgagctggagagtagtcacatgactgac
caggacaacgagatccgctccacagacatgccagagaggttccagctgcgctccatccca
gtgaagcctgctgaggatgatgagttggaggaagaggcagagtggatctacagaaatgct
ttctcaacccccaccatctccatgcaggagagtacagattacctggacagaggagccacc
actaactttagcaggaagggccccagcaccatcgccaagattaaggaggccctcaacttc
atgaggaatcagcattttgaggttccattcatcgcgttctacaggaaggagtacgtagaa
ccggagctcaacatcaacgacctgtggaaggtctggcagtgggacgagaagtggtgccag
ctgaagagcaggaagcagaacctgacacgtctgttccggaggatgcaggggtaccagtat
gagcagatctctgccgaccccgacaagcccctggctgacggcatcaggcccctggacact
gctgatatggagagactgaaagatgtccagtccatagatgagctgagtgacgtgtatagt
cacttccttctgtactatggccgagacatccccaagatgcagaacgcagccaaagctgcc
agcaagaagaagaagaagaagaagaagattgaggtcaacgaggaaggtgaggaggaagag
gtggaggaagaggaggaggtggaggaagagaaggggccggacctgaagctggcatctcgt
agagacatgtacagcatctgtcagagcgctgggctcgatggcctggctaagaagtttggt
ctgactccagagcagtttggagagaatctgagagacagctaccagcgtcacgagacagag
cagttccctgccgagcctgtagagttggctaaagactacgtctgcagccagtttaacagc
cccgaggtggtgttggaggggacccgttatatggttgcgatgcagattgccagggagcct
ctggtcagacacgtcctcagacagacgttccaggagagagccaagatcaacatcaagccc
accaagaaggggaagaaggacatggacgaggcccactttggctactccttcaagtacctg
aagaacaagccggtgaaggaactgaacggagaccagttcttaaagatgtgccaggctgag
gaggaggggcttctcaccatagacatctgcatcgacctcctaggggtcaaaggggttgca
ggtgaccagacatactttgatgagatcaagcagttttactacagagatgagttcagtcac
caggtgcaggagtggaacagacagaggaccctggccatcgaacgctccctcacacagttc
ctctaccctcagatggccaaggaactcaagaacaaactcatcgctgaggccaaggaaaac
atcatcaagtcgtgttgcaggaggctgtataactggctgaaggtggctccttacagacca
gaccagcaggcggaggaggaggatgatgatctgatggatgagagtcaaggaaaaggcatc
agagtcctgggagtggccttcgcagacagcagagacacgccagtgttctgttcactgatc
aacggagagggagaggtcgtggacttcctccgtctgccctacttcctgaagaggaggaac
gcatggaaggaggacgagagagacaaaaagctccaggacattgagaacctgaagaagttc
ctgaccagtaagaagcctcatgtggtggctgttgccggggagaatagggatgcccacatg
ataatggaggacattaagaggacagtgagtgagttggagcaggagtcttctctgcctgct
gtgggagtggagctggtagacaacgaactggccatgctctatatgaacagtaccaaatct
cagactgagttccgtgactaccctcccctgctgcgccaggctgtgtcagtagccaggaag
attcaggatcctctagtggagtacgctcaggtctgcagctccgacgaagacatcctctgc
ctcaaattacaccctctacaggagcatgtagttaaggaggacctgctgagtgctctgtac
tgtgagtttataaaccgggtcaacgaggtgggggtggatgtgaacagagccatctctcac
ccctacacacagagcctggttcagttcgtctgtggcctcggactcaggaagggatcacac
ctgctcaagatcctgaagcagaataacactcgtctggagaacaggactcagctggtcact
atgtgtcacatgggccccaaggtcttcatcaactgtgccggcttcatcaagatagacacc
gcctctctcggagacagtactgactcatacatcgaggttctggatgggtcccgggtgcac
ccggagacatatgagtgggcgagaaagatggcggtggacgctctggaatacgacgagtca
gcggaggacgccaacccggccggagcgctggaggaaatcctggaaaacccggagcgcctc
aaagacctggacctggatgcttttgctgaggagctggagagacagggttatggtaacaag
ggcatcaccctgtatgatatccgtgctgagttgagctgcaggtataaggacttgagagtt
ccctacagagctcctaacactgaggaggtgtttaacctgcttaccaaggagacaccagag
accttctatataggtaagctgatcaccagtgttgtgaccggtatagctcaccggcgcccc
cagggggagagttatgaccaggccattaggaacgacgctacagggctgtggcagtgcccc
ttctgtcaacaggacaacttccctgaactcagcgaggtgtggaaccattttgacagtggt
tcgtgtcctggccaggctataggtgtgagggctcggatggacaacggtgtccagggcttt
atccccaccaagtttctcagtgacaaggtggtcaaacaccctgaggagagggtgaaggtg
ggtatgacggtacactgtcgcatcatgaagattgacattgagaagttcaacgtggacctg
acatgtcgtacgtctgacctgatggataaaaacaacgagtggaagctccctaaagacagt
tactacgacttcgacacggagacagaggacaccaagacagaggaggaacgcaagaagaaa
cagcagagaaccacctatataaaacgtgtgattgcacacccatccttccacaacattaac
ttcaagcaggctgagaagatgatggagtccatggaccagggagatgttgttatcaggccc
agcagcaagggagagaaccaccttactgtcacctggaaggtagctgacggcatctaccag
catgttgatgtgagagaggagggcaaggagaacgcctttagcctgggacacacactctgg
atcaacactgaggagtttgaggatcttgatgagatcacagctcgttatattcagccaatg
gcagcgttcgctcgtgacctgctgggacacaagtacttccaggactgtaacggaggggac
aggaagaaaatggaggagttgttgatcaggtctaagaaggagaagcctacgttcataccc
tactttgtctcagcctgtaaagacctgccagggaagttcatactgggataccagcctcgt
ggcaaaccacgtgttgagtatgtgaccatctctcctgacggcttccggtaccgctcccag
atgttccccaccgttaacggactgttccgctggttcaaagaccacttccaggaaccggta
ccaggcatcacccccagcagtagcagtcgaacacggacacctgcctctgtcaacgctaca
ccagcaaacatcaacatcgcagacctgacgcgagcggtcagcgctctcccacgcaacatg
acctctcagatgttcagtgccatcgccgcggtgacggggcaggggcagggccagaacgct
aacactacgcctgcccagtggaactccagccaatacggttacaccgggggcagcagtggg
ggcgggggaggcagctcctcagcctatcacgtgtttgcgacgccccaacagccaatggcg
acacccatgatgacccccagctactcatacaccacccccagccagcagaccatgggtacc
ccgcagtacccctccaccccccagtcctcccactcccatggacacacacagagcaaccag
ggccacagcagccaccagggaccttcgtccaacactccctcgtcctcctccagaggacgc
actccgcagcagcagcctaagtcgagcggcagcacggcggtggactggggcaaggtagcg
gagcagtggctccaggagaaggaggcggagaggaagaagcagaagacccccaggatgacc
ccgcgaccttctcccagccccatgatccagagcacgcctatgtcaatcgctggagatgcc
acgccccttctggacgagatggaccgatag
DBGET
integrated database retrieval system
