Oncorhynchus masou masou (cherry salmon): 135544095
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Entry
135544095 CDS
T10723
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135544095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135544095
Spliceosome [BR:
omm03041
]
Complex B
Other components
Prp19-related factors
135544095
Complex C
135544095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
RRM_occluded
Nup35_RRM_2
zf-CCCH
zf-CCCH_4
zf-CCCH_10
RRM_YTH1
RRM_3
zf-CCCH_PARP12
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
135544095
NCBI-ProteinID:
XP_064827545
LinkDB
All DBs
Position
8:complement(12190680..12199738)
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AA seq
430 aa
AA seq
DB search
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEACQTCSKIKNVCQTCLLDLEYGLPIQVRDTGLSIKDDVPKSDVNKEYYTQN
MEREIGNSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPEDKSITTLYVGGLG
DSITDSELRNHFYQFGEIRTTTIVQRQQCAFIQFATRQAAELAAEKSFNKLIINGRRLNV
KWGRSQGEGGRRDGRGGKDGRGEGLTEMGLKLEPVPGLPGALPPPPVDEDTPTNYFNLGP
NSAPPVMNISLPPPPGVAMPPPPGFGPPMFHSMDPMGMPPPMGMRPPGHVHYPSQDPQRM
GAHASRHGGS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctttaggagctaacacttacaatagacaaaattgggaagacgcggatttt
cccattctctgccagacatgtcttggagagaatccttatattcgaatgaccaaggagaag
tatggcaaggagtgtaagatatgtgccagaccattcactgtgttccgatggtgtcctggg
acccgcatgcgcttcaagaagacagaggcgtgccagacgtgcagcaagataaagaatgtc
tgtcagacctgcctgctggatctagagtatggcttgccaatacaggtccgagacactggt
ctgtcaatcaaggacgacgtgccaaaatccgatgtgaacaaggaatactacacacagaac
atggaaagagagatagggaactctgatggtacccggcccgtgggtctcctgggtaaggcc
cccagctctagtgacatgctgctgaagctagcccgcaccacaccttactacaagaggaac
agaccacatatctgctccttctgggtgaagggagagtgtaagagaggagaggagtgtcct
tacaggcatgagaagccaactgatccagacgatcccctggcagaccagaacattaaggac
cgttactatggtatcaacgaccctgtggctgacaagctgctgaagagagcctccaccatg
ccgagactggacactccagaggacaagtccataactacactgtacgtgggggggctcgga
gactccatcacagactctgaactcaggaaccatttctaccagtttggggagatccgaacc
accaccatcgttcagaggcagcagtgtgccttcatccagtttgccacccgtcaggctgca
gagttagctgctgagaaatccttcaacaagcttattatcaacggtcgcagactcaatgtc
aaatggggcaggtcccagggagaggggggaaggagggacgggagaggggggaaggacgga
aggggagaagggctgactgagatggggctgaagctggagccggtacctggactgcctgga
gcgctacctccaccgcctgtggatgaagacacccctaccaactacttcaacctgggcccc
aactcagctcctcctgtcatgaacatcagtctacccccaccccccggtgtggctatgccc
ccccctccaggctttgggccacccatgttccactccatggaccctatggggatgccccct
cccatgggcatgaggccccctggccatgtccactacccctcccaggatccacagcgcatg
ggtgcacacgccagccgtcacggaggctcctag
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