Oncorhynchus masou masou (cherry salmon): 135544329
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Entry
135544329 CDS
T10723
Symbol
gabra3
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04082
Neuroactive ligand signaling
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135544329 (gabra3)
04082 Neuroactive ligand signaling
135544329 (gabra3)
04519 Cadherin signaling
135544329 (gabra3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135544329 (gabra3)
Ion channels [BR:
omm04040
]
Ligand-gated channels
GABA-A
135544329 (gabra3)
SSDB
Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
135544329
NCBI-ProteinID:
XP_064827926
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All DBs
Position
8:complement(19184439..19376856)
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AA seq
475 aa
AA seq
DB search
MAATLQKLAVFVSGIWICLLLLNPFPQTRAVVGHREPMPDDSRDNITIFTRILDRLLDGY
DNRLRPGLGAESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDTHACPLKFGSYAYTNNEVVYLWTKGDEGSVVVADDGSRLNQYDLLGHVIGKESMIS
STGEYVVMTAYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDDKKEAQE
MRRRESASLSKKANNTFNIVGTTYTLNEAKDPGLTTVSRSATTATHHQHHHHHHHSHKVP
KMDDNYVEAIKSYNRVSRVDKISRIIFPVLFFIFNLVYWATYINSKPPPKSTTHN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactctccagaaacttgcagtattcgtgtcgggcatatggatctgcctcctg
ctcctcaacccctttccacaaaccagggcagtggttgggcacagagagccgatgcctgat
gacagtagagacaacatcactattttcacccggatcctggacagacttctggatggctac
gacaaccggcttcgccccggactaggagcagagagtgtgacggaggtgaggacaaatatc
tacgtgaccagctttggaccagtgtcagacacagacatggagtacaccatcgatgtgttc
ttccgtcagagctggagggatgagaggctgaagtttgacgggcctatgcaggtcctgcct
cttaacaacctcctggccagtaagatctggactccagacacctttttccacaacgggaag
aaatctgtggcccacaacatgaccacgcccaacaaactgctacgactggtggacaacggt
accctgctttacactatgaggctaaccatccacgctgagtgtcccatgcacttggaggat
ttccccatggatacacatgcctgccctctgaagtttgggagctatgcatatacaaacaat
gaggttgtctatctctggaccaaaggagatgagggctctgtagtcgtagcagatgatggg
tcaaggctaaaccagtatgacctactgggccacgttattgggaaagaatctatgatttcc
agcacaggagaatatgtagtgatgacagcgtatttccatttgaaaaggaaaattggctat
tttgtgattcaaacctaccttccgtgcatcatgactgtcatcctgtctcaggtctccttc
tggctaaacagagagtcggttcccgcccgcactgtattcggggtcaccacagttctaacc
atgacaaccctgagtatcagtgccaggaactccctgcctaaggtggcttatgccacagct
atggactggttcatggcggtatgctatgcctttgtcttctccgccctgatagagtttgcc
acagtcaactactttaccaagcgcagctgggcatgggatgacaagaaggaggcccaggag
atgaggagaagagaatctgcctctctttccaaaaaggccaataacacattcaacattgtt
ggaactacatacacactcaacgaggcaaaggacccaggtttaaccaccgtctccaggagt
gccactacagctacacaccaccaacaccaccaccaccaccaccacagccacaaggttcct
aaaatggacgacaattacgtggaagccataaagtcctacaaccgtgtcagcagagtggac
aagatctcacgcatcatcttccctgtgctgttcttcatcttcaaccttgtctattgggcc
acgtacatcaacagcaagccgcctcccaagtccaccacccacaattaa
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