Oncorhynchus masou masou (cherry salmon): 135544343
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Entry
135544343 CDS
T10723
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135544343
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135544343
Surveillance factors
Other surveillance factors
135544343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
135544343
NCBI-ProteinID:
XP_064827953
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All DBs
Position
8:complement(19929755..19962582)
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AA seq
1057 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGRSVTSPPPSPALPKSKLADYRYGRE
EMLALYIKDDKPPEDITQDKEFAAILQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLM
GKGGGAAPAGVAKGRGGGIRGRGRGEGAFYQRAPGGPDDGEVGFGRGREMLRSQSWDDRA
ERPKFEKPIRRAEVVRPGFEEAGPLGRKDSWRADSGNWRTLREEEEEAAGGGGGEQPAWR
VAGTRRDDGGPRSAGWRDHGGRRKFEFDFRDSEGPRREDDRDGLPEWCTDEEDGEMGTFD
SSGAFMCIKKGSKGTITEEDLEFEALEEDENGQEVKDNSQEGKDNYKDNYTDGDECEAAC
EGVVKYRTPSPPAVSASPSSDPIPAPCAPEAPLAPISHPSKTNHVSTQGSSPPGSGAQLS
PDPSSSTTTFSSLMPPPSFGSLLPSTGGEVEEDEGMKHLQQEAEKMVASLQDTSLEEECF
TQALQESHNITSQSLSHPAPHSHTHTHTTGHTHSHSAHRDCALPLSHEAAMKWFYKDPQA
EIQGPFSTVEMCEWFQAGYFSMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLV
RQPPPPRGSSGNMDQELLKKQLEQAATAALYQQLQIRFQHMNRSGESSMMNRSMSVPDNG
SMWDMRTSASQQSGGEANLWDLTMSHSTQGPSLEQLQKLQDRREAELRAKREEEERKRRE
EKRRQQEEQKRREEEELYRRKQQCRQQQELILKLLQQAQPGGPGCISGSGSGTVWSGPQV
SALSKQGKSLSLLELETERLLKQQAQHQRAQQQRDRHGGLSMGQWGEGSVGMWSGGGMEP
KGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMKP
QDGFTTWCEQMLHALNTSANNSPSSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAK
EFAKQFLERRAKQKANHQRQQQQLSKEVPGLSVNNFPLQSMFQAAQMGKGGMYDSQAAKM
KKKQTMMLHSDPSILGYSFLGAGDRMSLGEMETVEDY
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacttaaacttgaggctccgtgcactatccagagggcggagtgtgacgtcc
ccccctccctctccagcattgccaaagtccaagctggctgattaccgctatggtcgtgag
gagatgctagcactttatatcaaagatgacaaacccccagaggatatcacgcaggataag
gagtttgctgctatcctgcaggatgagcctgtgcagcctttggcactggagcctctaact
gaggaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggttgatg
ggaaagggaggcggggccgcccctgcaggtgtggccaagggtcgtggaggaggcatcaga
gggagaggaagaggtgaaggtgcattctaccaaagagctcctggaggtcctgatgatgga
gaggtgggcttcggtcgtggccgagaaatgctccgcagccaaagctgggatgaccgagct
gagaggcccaagtttgagaagccaatcaggcgtgctgaggtagtgcgtccagggtttgag
gaggcgggacctcttggcaggaaggactcctggcgtgccgacagtggtaactggcgtacc
cttcgggaggaggaggaagaggcagcaggaggaggagggggagagcagccagcctggaga
gttgcaggaacccgccgtgatgatgggggtcctcggtctgcaggctggcgggatcatggc
ggccggaggaagtttgagtttgacttccgtgacagcgagggcccccgcagggaggacgac
agggacggccttcctgagtggtgcactgatgaagaggatggagagatgggcacctttgac
tcctcgggggccttcatgtgcatcaagaaaggctccaagggcaccatcactgaagaggat
ctggagtttgaagctctagaggaagatgaaaacggtcaggaagtcaaggacaacagtcag
gaaggcaaggacaactataaggataactacactgacggagatgagtgtgaagcagcatgt
gagggggtggtcaagtacaggactccatctcctcctgctgtctcggcctctccctcctca
gaccctatccctgccccctgtgccccagaggctcccttggcacccatctcccacccctcc
aaaaccaaccacgtgtccactcaaggcagctcacctccagggagtggtgctcagctcagt
ccagacccttcctcttctaccaccactttctccagcctgatgcctcctccttcctttgga
tctctcctcccatcaacagggggagaagtggaggaggacgagggcatgaagcacctacaa
caggaggctgaaaagatggtggcatctctgcaggacacatcccttgaggaggagtgtttc
actcaagcactgcaggagagccacaacattacctcccaatctctctcacacccagcccca
cactcacacacacacacacacaccactggacacacacactcccactctgcccatagggac
tgtgccctgcccctctcccacgaggcagccatgaagtggttctacaaggacccccaggca
gagattcaaggtcccttctccactgtggagatgtgtgagtggttccaggcaggctacttc
tccatgacactgctggtaaagaggggttgtgatgagggcttccagcccctgggtgacgtc
atcaagatgtgggggcgcgtgcccttctcccccggcccctcccccccacccctgctggtg
agacagcctccaccacctcgggggtcctctggcaatatggatcaggagctgctgaagaaa
cagttagaacaagcagccactgcagctctataccagcaattgcagataaggtttcagcac
atgaacaggagtggggaatctagcatgatgaacaggtccatgtcagtaccagataatggg
tctatgtgggacatgcgtacctcagcctcccagcagtcaggaggtgaggccaacctatgg
gacttaaccatgagtcattccactcaggggccatctctggagcagctacagaagctccag
gaccggcgtgaggctgaactcagggccaagcgagaggaggaagagaggaagcggagggag
gagaagaggaggcagcaggaggagcagaagaggcgtgaggaggaggagctgtacaggcgt
aagcagcagtgtcggcagcagcaggagctgatcctgaagctgctgcaacaggcccagccc
gggggcccagggtgtatctctgggtcagggtcagggactgtgtggagtggcccccaggtc
tcagcgctctccaagcaaggcaagagcctcagcctactggagctggagaccgagaggctt
ctcaaacagcaggcccagcaccagagggcccagcagcagagggacaggcatggaggcctg
tctatgggtcagtggggtgaggggtctgtgggcatgtggtctggtgggggcatggagccc
aaaggcagctctggaggtatgggtgtctgggaggaggctgtgaagaaccagaacagcctc
cgcaacatgggcatgaagaacagccgcagcagcccctctcttagcgagcagtacatgtta
aggaagaagcgtacagaggaggaggacaaattgctgaagctgctgcagggcatgaaaccc
caggacggcttcaccacctggtgtgaacagatgctgcacgcgctcaacacctccgcaaac
aactccccctcctcgtccctggatgtagccaccatcgtggcctatctgaaggaggtggag
tctccctacgaagtccttgactttatccgctcctacctgggcgacactgtggaagccaaa
gagtttgccaagcagttcctggagcggcgtgccaaacagaaagccaaccaccagaggcag
caacagcagttatcaaaagaagttccaggactgtccgtgaacaactttcctctacagtcc
atgttccaggcagcccagatggggaagggaggaatgtatgacagccaagctgcaaagatg
aagaagaaacagaccatgatgcttcactctgaccccagcatcttaggatattcattcctg
ggcgcaggggacaggatgagcctgggcgagatggaaacagtggaagattattga
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