Oncorhynchus masou masou (cherry salmon): 135544474
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Entry
135544474 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
omm
Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135544474
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
135544474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
135544474
NCBI-ProteinID:
XP_064828185
LinkDB
All DBs
Position
8:complement(28028252..28145451)
Genome browser
AA seq
2150 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYSFRGGGEYGPVISAPAQDDPVLRSF
IRCVQANLLCVWRRKVKPDAKELWIFWWGDEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKDFVRIGKWFVKPYELEEKHMGTSEHLSCSFTFFLHGESNVCTS
VEVAQHQPAYHITDDHTRLAQISSAPVQVILSPYGLAGSLTGQAYKMSDPAVRKLMEEWS
YFYPMVLQRHREGGAGTGGMGAEREGTDRPYDPHSHVAVEVIVGGVRMIYPAAFVLVAQG
DLPVEEPPPAPGAQGGSRDPSHCSIPLTPPTSPEQPCSADSGFVTTVSSVLPAQESAMGV
TNSPKHSGKKLTNQVVHQAWKECYLNQLQHKCSGPSSVTPKKEAPNGVPTWDFTDPEERA
PCSCSRLKLQKQQQQTNTSSANPPSGANSTPSSGPALPPPSLPKHKATDKPEKADKQPKR
ATAMTPFHHRLSVGQEACLEQDSSGGSQLGLVSLDPPLDPMPSCKYPKPLSAGRKAPESL
LHSPVSPLPPTLSPHPRGGQDPEVLDTSVGMAPCPDGASGMGGMEPSETALYAAPLGPRE
REAGAGWWRGFRTPRADKAEFRPPELPSDRVEVKTETQATEGVALKRLFMQTQKRFKISE
ECVRAHIQTLGLLHQPGDPGDDPYDFKEGDIEYSFPTSKRLKGQGRDPSKRGPKGEEISN
GALPDGKDAMSIFSSAPKADDDSPQDDDAAAKAQNPSLTRETDLVVLISDLENIFDEDEE
ELRHTARVLVSGSEDRREGRVAVPYPSTVADLQRMFPTPPSLEQHPAFSPIMTYRDTPSQ
EPPAPSVGSDHPLGPLSSTQLQEYRMEVEEGMASPKPEDIKDFSFVYRVPSVQPQMGCSM
FAPLRTLPSQCLPPLKLPDQCYYRPSWALLPKMDHYSSLPPSHHTPFIRDGYVNIPSVGD
QEYAQLSASALSVGTTGGILPSPSPAPRFSVPTPRTPRTPRGVGTASGQGSVKQEGTGTE
LSSPTSTPSTSLPMSSVAEPHTSSPPIPEAHSLYAALLLSDSVLNVFKDRNFDSCCICAC
NMNVKGADVGVYIPDSTLEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIFGRGSEVGQA
AERRLALCRRDPPMGDPRAKRPQDSSPAPSSVMVLLQQQCSQPISSLASMHLPPSCSCHG
RQGALLQSWMADKQWADGSDACVECYNALVQGQQYVDNPAGGKVDPAVVRSSALHSWPHT
NMLDISMLSSQDVVRMLLSLQPYLQDAIQKKRMGRTWENIQHVQGPLTWQQFHKMAGRGS
YGSEESPEPLPIPTLLLGYYDYYDRNFLALSPLALPFWEKLLLEPYGGQRDVAFLVLCPN
SDTLLAGAQVFFQELSAVYETCRLGKHRPLAKVSRDGLVRVGAVDTETETEKEKEKERQE
EEQIDQWFTGPWAGQQHIDNLRKLKLYARACRRQLGPQLSALSLDSSLFIPPKHQPPLAP
TPSSAQPAPSSSQLPSGPGAPAEGEPAAAPSSGSTPTPTAAASDQPGPAEITQGGAAEAK
TTPNATPPPPSQPAETPESLAERERIGIPTLADSADSHAHPPAIVIYVVDPFLCSGGARD
GGGGGEEEEGEEVEAGSVWLLGLMRCYTEMLKTLPESMRPALVLQVVPCQYLLQPASGES
PLYLQHLRSLAFSAYSQCRRLLPTKTHIKSLTGFGPASTLESVLKSPEHPSPLQGYSPPY
ILGPTRAKMPEPGEVWAEIPPRYNVLFVGYCLSHDQRWILVSCTDQQGELLETCIINIDV
PNRVRRPKVSARKMGLQKLWDWCVGIIQMTSLPWRIVIGRLGRLGHGELKDWSVLLGEHS
LHSISRQLKEACRMCGISSADSPSILSACLVAMEPQGSIVVMPDAVTMGSVFGRSTALNL
QTSQLNTPQDASCTHILVFPTSATTQLAASSYPTEDNADDMFDLPFPDELENDIGHDILN
LHPSPNTSPVPSPGSPSGMGGSSHFQHNRSQGERLLSRENPPEELKQQPLALGYYVSTAQ
ADSLPHWFWASCPQAQNQCPLFLKASLHHHISIATAQSDEPTQTSSDKTAKRTPHPLDSK
TTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHLAVLTQMYNAILNML
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcagcgaattgggtggctaacggggcaagccttgaagactgccactccaac
ctcttctctctggcggagctgacgggcatcaaatggcggtgctacagcttccgcggcggt
ggcgagtacggaccggtgatctcagcgccggcacaggatgacccggtgctgcgcagcttc
atacgctgtgtgcaggccaacctgctgtgtgtgtggcgccgcaaagtcaagcctgacgcc
aaggagctgtggatcttctggtggggcgatgagcccaacctctccgacgtcatccatcac
gagctggaagtggctgaggagggactatgggagtgtgggctgtcatatgaatgccggacc
ctcctgttcaaggccattcacaacctgctggagaggtgtctgatggacaaggactttgtg
cggattgggaagtggtttgtcaagccatacgagctggaggagaagcatatgggcaccagt
gagcacctgtcgtgctccttcaccttcttcctgcatggggagagtaacgtgtgcaccagc
gtagaagtcgcccagcaccagcctgcctaccacatcactgacgaccacacccgcctggcc
cagatctcctcagcccctgtacaagtgatcctgagtccgtacggtctggcgggctccctg
actggccaagcctataagatgagtgacccagctgtaagaaaactgatggaggagtggagc
tacttctaccccatggtgcttcagcgccacagagaagggggtgcaggaacggggggcatg
ggcgccgagagggagggcactgaccggccatatgacccacacagccatgtggccgttgag
gtcatcgtaggtggtgtgaggatgatctatccagcagcctttgtactggttgcccaaggc
gacctgcctgtggaggagcccccacctgcaccgggagcccaggggggcagcagagaccca
tctcactgcagcattcccctcacaccccccacttcacctgaacagccctgctcagcggac
agtggctttgtgacaacggtgtccagcgtcctccctgcccaggagagtgccatgggggtc
accaacagcccaaagcattctgggaagaaactgaccaatcaggtggtgcatcaggcgtgg
aaggagtgttatcttaaccaactgcaacacaaatgcagtgggcccagtagcgtgacgcca
aaaaaggaggcgccaaatggggtgcccacctgggacttcaccgacccagaggagagggca
ccatgcagctgctccaggttaaagctgcagaaacagcagcagcagaccaacacctcctct
gccaaccctccgtctggtgccaactccaccccctcctctggcccggccctcccccctccc
tccctgcccaagcacaaggccacggacaaacccgagaaagccgacaaacagccgaagaga
gccaccgccatgacccccttccaccaccgcctctctgtgggccaggaggcctgcctggaa
caagactcatctggagggtcccagctcggcctagtcagcctggaccctcccctggatccc
atgcccagctgcaagtaccccaagcccctctccgctggcagaaaagctccagagtccctg
ctccactcccctgtctccccattaccccccacgctcagcccccatccacgggggggacag
gatcctgaggtactggacacctctgtgggcatggccccctgtccggatggggcgtcaggg
atgggggggatggaacccagtgagacggctctgtatgcagcccctctggggcccagggag
agggaggctggggcaggctggtggaggggcttcaggactcccagggctgataaggctgag
ttcaggcctccagagctccccagtgacagagtggaagtaaagacagagacgcaggccact
gagggagttgcactgaagagactattcatgcagacacagaagcgcttcaagatctcggag
gagtgtgttagggcccacatccagaccctgggtctcctgcatcagcctggggaccccggg
gatgacccctacgacttcaaggagggagacatcgagtacagcttccccacctccaagaga
ctgaagggccagggcagagaccccagcaaaagaggccccaaaggagaggagatcagcaac
ggtgcactgcctgatgggaaagacgccatgtccatctttagctctgctcccaaagctgat
gatgactcaccgcaggacgatgatgcggcggccaaagcccaaaacccttctctaaccagg
gagactgatctggtggtcctcatctcagacctggagaacatcttcgacgaggatgaggag
gaacttaggcacacagccagggtcctggtatcaggaagtgaagatcggagggaagggagg
gtggctgtgccctatccttcaacagtagcagacctccagcggatgtttcccacaccccct
tccctggagcagcacccggccttctcccccatcatgacataccgcgacacccccagccag
gagcccccagccccctcggtgggctccgaccaccccttgggccccctgtcctccacccag
ctccaggaataccggatggaggtggaagagggcatggccagccccaaacctgaggacatc
aaggacttctcatttgtgtaccgtgtcccctccgtccagccacagatgggctgctccatg
tttgctccgctgcggaccctccccagccagtgtctgccccccctcaagttgcctgaccag
tgttactaccggccttcctgggccctgctgcccaagatggatcactactcctccctgccg
ccctctcatcacaccccattcatcagagatggatatgtcaacatccccagtgttggggac
caggagtatgcccagttgagtgccagcgccctgtccgtgggcaccacgggtggcatcctc
ccctcaccctcccctgccccccgcttttctgtccccacccctcgtaccccccgcaccccc
agaggcgttggcacggccagcgggcagggctcggtgaagcaggagggcaccgggacagag
ctgagctcccctacctccacgccttccaccagcctgcctatgagctccgtagctgagccc
catacgtccagccccccaatacccgaggcccacagcctgtacgccgccctgcttctctct
gactccgtcctcaatgtcttcaaagaccgcaactttgacagctgctgcatctgcgcctgc
aacatgaatgtgaagggcgccgacgtgggcgtgtacatccccgactccacgcttgaggac
cagtaccgctgcatgtgcggcttcagcgccatcgtcaaccgccggctggcccacggcacg
ggcctcttcctggaggacgagctggacatctttgggaggggctcagaggtgggccaggcg
gctgagaggagactggcgctctgccgcagagacccacccatgggagacccccgggccaag
cgcccacaggactcctcccctgccccttcctctgttatggtgctcctccagcagcagtgc
tcccagcccatctcctccctggcctccatgcacctccctccttcctgctcctgccacggc
cgccagggggccctgctccagagctggatggctgacaagcagtgggcggatggcagtgat
gcgtgtgtggagtgttacaacgcgctggtacagggacagcagtatgtggataaccccgcc
ggagggaaagtagatccggctgttgtgaggagcagcgctctacattcctggcctcacacc
aatatgctggacatcagtatgctgtcttcccaggacgtggtgcgtatgctgctgtcgctg
cagccctacctccaggacgccatccagaagaaacggatgggccggacctgggagaacatc
cagcacgtacaaggaccgctcacatggcaacagttccacaagatggctggacggggctcc
tacgggtccgaggagtcgccagagcctctgcctattcccaccctgttgttgggctactac
gactactacgaccgtaacttcctggcgctgtcgcccctggcgctgcccttctgggagaag
ctgctgttggaaccgtacgggggacagagagacgtggccttcctggtgctctgccccaac
tctgacaccctgctggctggggcacaggtcttcttccaggagctcagcgctgtctacgag
acatgccggttggggaaacacagacccctggccaaggtgtccagagatggcctggtgcgt
gtgggggcagtggacacagagacagaaacagagaaggagaaagagaaggagaggcaggag
gaggagcagatagaccagtggttcacagggccctgggctggacagcaacacatcgacaac
ctcagaaaacttaaactctatgcccgagcctgcagaaggcagctaggtccacagttgtct
gccctgtctttggacagtagtctgtttataccccccaagcatcagcctcccttagcccct
acgccctcctcagcccagcctgccccctcctccagccagctcccctctggccccggggcc
cctgctgagggagagccagcggcagcccctagctcaggaagcacccccacccccacggca
gcagcctcggaccaaccaggcccagcagagattacccaaggaggggccgctgaggccaag
actacccccaatgccacaccaccaccacccagccagccagcagagaccccagagagtttg
gcggagcgagagcgaatcggcattcccacgctggcggactcggccgatagccacgcccac
cccccggccattgtgatctatgtggtggaccccttcctctgctcaggcggagcgagggat
ggcggaggaggtggagaggaggaggagggagaggaggtggaggcgggcagtgtgtggtta
ctagggctgatgcgttgctacacagagatgctaaagacattgccggagagcatgagacca
gctctggtgttacaggtggtgccttgtcagtacctgctccagccagccagtggtgagagc
cctctgtacctgcagcacctgcgctccctggccttctcagcctactcacagtgcagacgc
ctcctacccacaaagacacacatcaagtctctgaccggtttcggccccgcctccacccta
gaatctgtgcttaagagcccagagcaccccagccctctacagggctactctcccccgtac
attctgggtcctacccgtgccaagatgccggagccaggggaggtgtgggcagagatccct
cctaggtacaacgtgctgtttgtgggctactgcctgtcccacgaccagcgctggatcctg
gtctcctgcaccgaccaacagggagagctactggagacctgcatcatcaacatcgacgtg
cccaacagagtgcggcggcccaaggtctcggccaggaagatggggctgcagaagttatgg
gactggtgtgtcggcatcatccagatgacctcactaccctggaggatcgtgattggtcgg
ctgggcagactaggacacggggaactgaaagactggagcgttctcctgggggagcactcc
ctccactccatcagtcgccagctgaaggaggcgtgtcgtatgtgcggcatctcctccgcg
gactccccctccatcctcagtgcctgcctggttgccatggagccccagggctccatcgtg
gtgatgccagatgcggttacaatgggttcggtgtttggtcgcagcacggccctcaacctg
cagacgtcccagctcaacacccctcaggatgcttcctgtacccacatcctggtattcccc
acctccgccaccacccagctggccgccagctcctaccccacagaggacaacgccgatgac
atgttcgacctgcctttccccgatgagctggagaatgacataggacatgacattctcaac
cttcacccttcccccaacacctccccagtaccctcccctggctccccctctggcatgggg
ggaagctcacatttccagcataacaggagtcagggagagaggcttctgtccagggagaac
cctccggaggagctgaagcagcagcctctagcccttggatactacgtctccactgcccag
gccgacagcctgcctcactggttctgggcctcctgccctcaggctcagaaccagtgtcca
ctcttcctcaaggcatcgctacaccaccacatctccatcgccacagcccaatcagacgag
cccactcagacgagctcagacaagaccgctaagaggacgcctcaccctctggactccaag
accacctctgacgtgctcaggtttgtgttggagcagtacaacgccctctcgtggctgacg
tgtaaccctgccacccaggaccgccgctcctgcctgcccgtccacctggccgtgctcaca
cagatgtacaatgccatcctcaacatgctctag
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