Oncorhynchus masou masou (cherry salmon): 135544568
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Entry
135544568 CDS
T10723
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135544568
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135544568
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
JAG1-like_EGF2
FlaF
Motif
Other DBs
NCBI-GeneID:
135544568
NCBI-ProteinID:
XP_064828355
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All DBs
Position
8:complement(34175176..34445172)
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AA seq
1629 aa
AA seq
DB search
MDIPLTTPLLLALLLCSLSFVHGAMDSCYDDDEGVPSRCMPKFENAAFNRTIKASNVCGS
PPEDYCMQTSSTRSCHHCSVLDMGLSHNASLLTDFHTDEEPTWWQSQSMFYRVQHPNSVN
LTLRLGKAFEITYVRLKFYTSRPESFAIYKRTNQDGPWVPYQYYSASCSKTYGKNAKGYI
RPGDDERMALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSAVLQEWVTATDLLISLD
RLNTFGDEFFKDAKVLRSYFYAISDFSVGARCKCNGHGSECVLDEQGALVCDCQHHTAGV
DCQKCDPFYQDRPWARATGDSANQCMKCNCSGQADACVFDAEQYRSTGSGGRCVDCRDHT
DGPHCERCKENHYRRSPQDLCRPCDCNTIGSVSLQCGAEGMCTCRPSVTGEKCDTCQPGF
HSLSPGGCRSCDCETRGSVGICSTLDGGCHCKDNVEGQACDRCKPGSFNLQENNPAGCTS
CFCFGHSLACRSSNDHAAFNITSDFLEDPDRWSGQFSGGQEYPLLWKEGEVYLLPLSEDD
LGFYRAPEKFLGNHLLSYGQLLSLTFTAEAQCLLPPSVTVLLEGSGITLSADLSPQPGLV
HQPGLAPQHTFTLRLHKEETRLRPFLSAFEFQSLLFNLTAFRISNAGGHNYTSQLSGVTL
ASAAHFSSLVTSSTPPAPWVEVCTCPPGFGGQFCELCAPGYTREVPNRGPLSPCVPCTCH
QHGPCHPETGVCECADFTTGPTCERCLDGYYGNTLIGTTNDCQTCPCPDHTSCAQIMEIG
DVVCTNCPSGQRGTRCELCEDGFHGDPLGRSGLVRQCERCDCNGNVDPNALGVCDHMTGR
CFKCLGHTEGDHCQRCRRGYYGDAMDRTMAGKCKPCDCSPAGTSGLLEDCDPQTGSCQCL
SHVTGGDCSQCSVGFFNLQPGVGCERCNCNPIGSSSAGCHPITGQCVCQPGLEGRLCSTC
RMGFFGFSSRGCRACNCDPMGSRSMQCHTNGTCPCRQGFVGYKCDQCELNYFHNRATHQC
EECPICYGLVKEEAGKLKARLQDLEKLLARFDCRNGSGRQHHERQHHERQHHERGHQGED
SLPNALEDFLAIQEAKEAFVKQFALLETSTHTLSAQLHTVATAMNCSGSMEEEQEEGWTT
LCRTLADSVSVVRSAQTQLTQATLDLDNMVIPFKMTPVPNRWNSAVNESEILMKSHTEMA
GHIESIATKAFMASNQTYSLLMDLLEDNSIEEYISILTEQMADMQQMKENLMAQVNETLA
IQLSLEEESAEIMVAFVNLTSSILELSKKMPNPTSGTNQSDPSLRSGANQTEGVELSNRT
SELAFHVQSKEELASKIREEMEPRIQTAHNNLAAVQDMHKLTVQAQGSKVIALSSVVTGK
EVESKAITLRRELEDMQREWPQRQAQTKAALKRERLLREKVLEDVSKKVNQTKRVLRPAL
ESATLSNATAQEAKHIANALSKEAKATLTQGKHTRTLSAQLSSSIDITLQQLAEQENHTV
QAQTQTNAEPVESLASVKVNIQAAQLQLEAYSLTLTQLVSKIDGGMALERFERILSETAV
RLSVLRGSVESPALNGKIQTLRSAAQDQNSQLTHLEQDLQEIRQERDSLKDIALHLPQTC
PQASGIEGH
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggatatcccactgaccaccccactcctcctcgccctccttctctgctccctctccttc
gttcacggggccatggactcctgctacgatgacgacgagggtgtccctagccgttgcatg
cccaagttcgagaacgcagcctttaaccgcacgatcaaggcttccaatgtgtgcggttca
ccgccagaggattactgcatgcagacgagctcgacgcgctcctgccaccactgtagtgtg
ttggacatgggcctcagccacaacgccagcctgctgacggacttccacacagacgaggaa
cccacctggtggcagagccagtccatgttctacagagtccagcacccgaactctgttaat
ctcaccctgcgcctcggtaaggcctttgagatcacctacgtgcggctcaagttctacacc
agccgaccggagagctttgccatctacaagcggacaaatcaggatggaccatgggtgccc
taccagtactacagcgcctcctgtagcaagacctacgggaagaacgccaagggatatatc
cgcccgggtgacgacgagaggatggcattgtgcacagacgagttcagtgacatctcccct
ttgactgggggcaacgtggccttctctactttggagggacgacccagcgcatataacttt
gaccagagcgccgtgctgcaggagtgggtgacagccaccgacctgctgatctctctggac
aggctcaacactttcggagacgagttcttcaaggacgccaaggtgctgcgatcctacttc
tacgccatctctgatttctctgtgggagccaggtgtaagtgtaatggccatggcagtgag
tgtgtgttggacgagcagggggctctggtgtgtgactgccagcatcacacggccggggtg
gactgccagaagtgtgacccgttctaccaggacaggccatgggccagggccactggagac
tctgccaaccagtgtatgaagtgtaactgcagtgggcaagcggatgcatgtgtgttcgat
gcggagcagtaccgtagcacagggagtggggggcgctgtgtggactgtagggaccacact
gacggaccgcactgtgaacgctgcaaagagaaccactaccgacggtcaccacaggacctc
tgccgcccctgcgactgtaacaccataggttctgtgagtctgcagtgtggtgcagagggg
atgtgtacgtgcagacccagtgtgacgggggagaagtgtgacacctgtcaacccggcttc
cactcgctcagccctggtggctgcaggtcgtgtgactgtgaaaccaggggcagtgttggc
atctgctctacgctggacggcggttgtcactgcaaggacaacgtggagggacaggcgtgc
gacaggtgcaagccaggctcctttaacctgcaggagaacaacccagctggctgcacctca
tgtttctgcttcggacactcattggcctgcagatcctccaatgaccatgcagctttcaac
atcacttctgacttccttgaagacccagaccgctggtctggacagttctctgggggacag
gagtaccctctgctgtggaaggaaggtgaggtctacctgctaccactcagtgaggatgac
ctgggcttctacagagctccagagaagttcctggggaaccatctcctgagctatggccag
ctcctctccctgaccttcacggccgaggcccagtgcctcctccctcccagtgtcactgtg
cttctggaaggatctggaatcaccctgtcagctgacctttcaccccaacctggacttgtc
caccagccaggcctcgctccccagcacaccttcactctcagacttcacaaggaggagaca
agactaaggccttttctgtctgccttcgagttccaaagtcttctcttcaacctcactgca
ttcaggatcagcaacgcaggaggacacaactacacgtcccaactctcaggggtaaccctg
gcctccgctgcccacttctccagccttgttacatcctctacccctcctgctccctgggtt
gaggtgtgtacgtgccccccggggtttgggggtcagttctgtgagctctgtgccccaggc
tacaccagagaggtccctaacagaggacccctgtcaccctgtgtgccctgcacctgccac
cagcacggaccctgccaccctgagacaggtgtgtgtgagtgtgcagatttcaccacagga
ccaacctgcgagcgctgcctggatggttactatggcaacacgttgattggcacgaccaac
gactgtcaaacttgcccctgcccggaccacaccagctgtgctcaaattatggagattggg
gacgtggtctgtaccaactgcccttcaggacagaggggaaccaggtgtgagttgtgtgag
gacggtttccacggcgaccccctgggccgttctgggctggttcggcagtgcgagcggtgc
gattgtaacggaaacgtggatcccaacgcgctgggcgtgtgtgatcacatgacaggccgc
tgcttcaagtgtctgggacacaccgagggggaccactgtcaacgttgtcgacgcggttac
tatggagacgccatggaccggacgatggccgggaagtgcaaaccctgcgactgcagtcct
gcagggacttctgggttgttggaggactgtgacccccagaccggaagttgtcagtgcctt
agtcatgtgaccgggggagactgtagccagtgctcagtcggcttcttcaacctgcagcct
ggagtaggctgtgagaggtgcaactgtaaccccattggctcgtcttccgcggggtgccac
ccaatcacagggcagtgtgtgtgtcagccgggactggaggggcggctgtgcagcacctgt
cgtatgggcttctttggtttctcctcacgaggctgcagagcctgtaactgcgaccctatg
ggttcccgctccatgcagtgccacaccaacggcacctgtccctgccgccagggcttcgtg
gggtacaagtgtgaccagtgtgagctcaactacttccacaacagagccacgcaccagtgt
gaagagtgccccatctgctacgggctagtcaaggaggaggcagggaagctgaaggcacgg
ctgcaggatttggagaagctccttgcacgcttcgactgccggaatggctccggacgccag
catcacgagcgccagcatcacgagcgccagcatcacgagcgtggccatcagggggaggac
agcctgcccaatgcgctggaggacttcctggctatccaagaggcaaaagaagcctttgtc
aaacagtttgctctcctggagacgtctacacacactctctcagctcagctgcacactgtt
gccactgctatgaactgtagcggcagcatggaagaagagcaggaggaagggtggacaaca
ttgtgcaggacccttgctgactctgtgtccgtggttagaagtgcacagacccagctgacg
caggcaactctggacctggacaacatggtcatccctttcaagatgacacctgtgcccaac
cgctggaactctgcggtgaacgaatcagagatacttatgaaaagtcacacagagatggct
ggtcatatagagtctatagcgaccaaagctttcatggcctccaaccagacctactctctc
ctgatggacctactggaggacaactctattgaggaatacatcagcatcctcacggagcaa
atggcagacatgcagcagatgaaggagaatttgatggcccaggtgaatgagactctagcc
attcagctgtctctggaggaggagtctgctgagatcatggttgcctttgttaacctcaca
tcctccatattggagctgtccaaaaagatgcccaaccccacatcaggaaccaaccaatca
gaccccagcctaagatcgggtgccaatcaaacagagggtgttgagctgagcaacaggaca
tctgagctggcgttccatgtccagtctaaagaagaactggccagtaagatcagagaggag
atggagcctcgaatacagactgcccacaacaaccttgctgccgtacaggacatgcacaag
ctgacagttcaagcccaggggtcaaaggtcattgccctgtcatcggtggtgacagggaag
gaagtggagtcaaaggccattaccctgcggagagaactggaagacatgcagagagagtgg
cctcaaaggcaggcccagacgaaggctgctctgaagagggagaggctgctgagggagaag
gttctggaagacgtcagtaagaaggtgaaccagaccaagcgagtccttaggcctgccttg
gagagcgctaccctctccaacgctaccgcacaagaagcaaaacacatcgcaaatgccctg
tctaaagaggccaaggccaccctaacccagggcaagcacacgaggacattgtctgcccag
ctcagctcatctatagacataaccctgcagcagctggctgagcaggagaaccacactgtt
caggcacaaacccagacgaacgcagagcctgtagagtctctggccagtgtaaaggtgaac
atccaggcagctcagcttcaacttgaggcctactccctcacactcacccagctcgtcagt
aaaatagatgggggcatggcactggaacggtttgaacgtatactgagtgagacggcggtg
cggttgagtgttctgcgtggcagcgtggagagcccggccctgaacgggaagatccagacc
ctacgatcagccgcccaggaccagaacagccagctgacccacctggaacaggacctgcag
gagatcagacaggagagagacagtctgaaggacattgccctgcacctgccccagacctgc
cctcaggcctcggggatagagggacactag
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integrated database retrieval system
