Oncorhynchus masou masou (cherry salmon): 135544654
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Entry
135544654 CDS
T10723
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135544654
04518 Integrin signaling
135544654
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135544654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omm00536
]
135544654
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135544654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
EGF_Tenascin
fn3
EGF_2
Fibrinogen_C
DUF7949
Fn3_Dep-1_3rd
EGF
Pur_ac_phosph_N
hEGF
Fn3_Dep-1_1st
Motif
Other DBs
NCBI-GeneID:
135544654
NCBI-ProteinID:
XP_064828505
LinkDB
All DBs
Position
8:39214016..39284732
Genome browser
AA seq
1881 aa
AA seq
DB search
MGTKSILGCVFLTLLLNLCQAGLVRKLLRDKRATLTTPGGNNVTLTSAEQPVVFNHVYNI
NVPSGSLCSVDLDALGSTSLEPQDAAPPSSLRTTEHTLDGQNQIVFTHRINIPQQECACT
DGLPDLKDLLSRLEMLEGEVSTLRDQCASGDAGCCSIQPVTGEVGTKPYCNGHGNYSADT
CGCICEPGWKGPNCTESECPNNCQDQGRCVDGKCICFEGFGRDDCSLKVCKVDCGGNGQC
IGGVCVCSAGYTGEDCSKLTCPSDCNDRGVCFNGMCICNAGYQGEDCSQLACPNNCHNRG
QCVNGQCVCNVGYQGEDCSELSCPNNCQDQGRCVDGKCICFEGFGRDDCSLKVCKVDCGG
NGQCIGGVCVCAKGYTGEDCSQTDCLNNCLSRGRCVDGECVCEEPWTGYDCSELICPNDC
YDRGRCVNGTCYCEEGFTGEDCGEKTCPSDCLGNGFCVDGQCVCSAGYTGEDCSKLTCPS
DCNDRGVCFNGMCICNAGYQGEDCSQLACPNNCHNRGQCVNGQCVCNVGYQGEDCSELSC
PNNCQDQGRCVDGKCICFEGFGRDDCSLKVCKVDCGGNGQCIGGVCVCAKGYTGEDCSQT
DCLNNCLSRGKCVDGECVCEEPWTGYDCSELICPNDCYDRGRCVNGTCYCEEGFTGEDCG
EKTCPSDCLGNGFCVDGQCVCSAGYTGEDCSKLTCPSDCNDRGVCFNGMCICNAGYQGED
CSQLACPNNCHNRGQCVNGQCVCNVGYQGEDCSELSCPNNCLNRGRCVNGQCVCDEGFGG
EDCSIKICPSDCYGSGDCVDGQCVCYAGFTGEDCSELSCPNNCLNRGRCVDGQCVCDEGF
TGEDCTEKHCPNDCLDRGYCVDGKCVCLEGYAGVDCSELTCPDNCNNRGHCVNGKCMCEE
RYMGDNCGELSCLNNCQDMGRCVNGQCLCDEGYIGEDCSEVSPPKDLTVTEVTTETVDLT
WNNEMLVTEYLIAYVPTSPGGLYQEFRVPGDKTAATVSELEPGIEYLINVYAILSNKKSI
PISARVATNLPEPDGLKFKSVRDTSVEVLWDQLDIPFDAWELYVRNTKEENGKILTTLPS
SQTMYEQSGLGPGQEYEVSVGVIKNNTRGPQSTKIITTRIDGPRQVEVRDVTDCSGLVTW
FQPVAQVDGVTVSYGPSSHPTERTSVDLSTSDKQYSFDSLSPDTEYQVSLISRRGDDTSE
PVSEIFTTDLDAPKDLKPLGQTDDSVTLKWINSRADVDSYRVKYSPISGGSHGEEVFSRG
PGDSTQATITGMKPGTEYGIGVTAVKNERESLPATTNAATDLDGPKDLEVSESTETSMTL
VWRRPRAKITVYRLVYISRDGRREEVEVPGTATTYVLTNLTPGMLYTITLVAERGSKKST
PVTLSASTGLGAPRGIRFSEVTESSAIVHWTMPRARVDSYRIVYVPLQGGSPMTVLADGT
ETQALLPDMLPGVTYQVTIFSMKGLEESDPGTDTITTALDRPQGLSAVNVTDTTALLLWQ
PTRATVDGYIITYSADSGSPVMEHVSGNTVEFEMGSLVPATHYTVGVYAMREALKSGTTT
TEFTTDVDSPRDLVASNVQTDSATLTWKPPRADITGYILTFTSSDSTVREVVLNPTATSY
SMTQLSGTTDYNVRLQAIAGAQRSRHIATVFTTSGVLYRYPKDCSQALLNGDTTSGIYTI
YLGGEESQPIQVYCDMTTDGGGWMVFLRRQSGQLEFFRNWKNYTGGFGDINAEFWLGLAN
LHKMTTAGQYELRVDLRDNGESAYAQYDKFTIAEPRSRYKIHIGGYSGTAGDSMTYHQGR
PFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDDSHSKGINWFHWKGHEHSIP
FAEMKIRPVNFRNFESRRKRS
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaaaagcattttagggtgtgtcttcctgactctccttctcaacctctgccaa
gctgggctggtgagaaaattacttagggataaacgggcgaccttgacaacccctggtgga
aacaatgtgaccctgaccagcgctgagcaaccagtggtcttcaaccacgtctacaacatc
aacgtcccttccggctcactatgctcagtggacctggatgccctaggaagcaccagcctc
gagccccaggacgcagctccgccttcaagcctccgcaccaccgaacataccctggatgga
cagaaccagatagttttcactcaccgcattaacattcctcagcaggagtgtgcatgcact
gatgggctcccggatctgaaggacctcctgagcagattggagatgctggagggagaggtg
tccacgctgagagaccaatgcgctagtggagacgctggctgctgcagcattcagccagtc
acaggtgaggtggggaccaagccttattgcaatggccatggcaactacagtgctgacacc
tgtggttgcatttgcgagcctggctggaagggacccaactgcaccgagtctgaatgcccc
aacaactgccaggaccaaggtcgctgcgtggatgggaagtgcatctgctttgagggcttt
ggcagggatgactgttcactcaaggtttgcaaagtggactgtggtgggaacggacaatgt
attggtggggtctgtgtctgcagcgctggctacactggagaggactgctccaagctcacc
tgccccagtgactgcaacgatagaggtgtctgcttcaacggcatgtgtatctgtaatgct
ggctaccaaggagaggattgtagccagctggcttgccccaacaactgccacaacagggga
cagtgtgtcaacgggcagtgcgtctgcaatgtaggctaccagggagaggactgctctgag
ctctcctgccccaacaactgccaggaccaaggtcgctgtgtcgatgggaagtgcatctgc
tttgagggctttggcagggatgactgttcactcaaggtttgcaaagtggactgtggtggg
aacggacaatgtattggtggggtctgtgtctgtgccaagggttacactggagaggactgt
tctcagacagactgcctgaacaactgcctaagccgtggaaggtgtgtggacggggagtgt
gtgtgtgaagagccctggacgggctacgactgctccgaactcatctgccccaacgactgc
tacgaccgcggccgctgcgtcaatggaacctgctactgcgaagaaggattcaccggggag
gactgtggggagaaaacctgcccaagtgactgcctgggaaatggtttctgtgtggatggc
cagtgtgtctgcagcgctggctacactggagaggactgctccaagcttacctgccccagt
gactgcaacgatagaggtgtctgcttcaacggcatgtgtatctgtaatgctggctaccaa
ggagaggattgtagccagctggcttgccccaacaactgccacaacaggggacagtgtgtc
aacgggcagtgcgtctgcaatgtaggctaccagggagaggactgctctgagctctcctgc
cccaacaactgccaggaccaaggtcgctgtgtcgatgggaagtgcatctgctttgagggc
tttggcagggatgactgttcactcaaggtttgcaaagtggactgtggtgggaacggacaa
tgtattggtggggtctgtgtctgtgccaagggttacactggagaggactgttctcagaca
gactgcctgaacaactgcctaagccgtggaaagtgtgtggacggggagtgtgtgtgtgaa
gagccctggacgggctacgactgctccgaactcatctgccccaacgactgctacgaccgc
ggccgctgcgtcaatggaacctgctactgcgaagaaggattcaccggggaggactgtggg
gagaaaacctgcccaagtgactgcctgggaaatggtttctgtgtggacggccagtgtgtc
tgcagcgctggctacactggagaggactgctccaagctcacctgccccagtgactgcaac
gatagaggtgtctgcttcaacggcatgtgtatctgcaatgctggctaccaaggagaggat
tgtagccagctggcttgccccaacaactgccacaacaggggacagtgtgtcaacgggcag
tgcgtctgcaatgtaggctaccagggagaggactgctctgagctctcctgccccaacaac
tgcctcaaccgtggccgctgtgtcaacggacagtgtgtgtgcgatgaagggttcggtggt
gaggactgcagcatcaagatctgcccctcagactgctacggcagtggagattgtgtggat
ggccagtgtgtctgctatgctggcttcaccggtgaggactgcagcgagctgagctgcccc
aacaactgcctgaaccgcggacgctgcgttgacgggcagtgcgtctgcgacgagggcttc
acaggggaagactgcactgagaagcactgtcccaatgactgcctggacaggggatactgc
gtggatggcaaatgtgtctgcctggagggctatgcgggtgtcgactgctctgaactcacc
tgccctgataactgcaacaacagggggcactgtgttaatgggaagtgcatgtgtgaggag
cgatacatgggagacaactgtggagagctgagctgcctcaacaactgccaggacatgggc
cgctgtgtgaatggacaatgtctctgtgatgagggatacatcggagaagactgctcagaa
gtttcacctccaaaggacctgactgtaacagaggtcaccaccgagacagtggatctgacc
tggaacaatgagatgctggtgacagagtatctgattgcatatgtgcccactagtcctggg
ggtctgtaccaggagttcagagtgcccggagacaagactgctgccactgtcagcgagctg
gagcccggcatcgagtacctgatcaacgtctatgccatcctcagcaacaagaagagcatc
ccaatcagtgccagggtggccacaaatctaccggagccagacggcttgaagttcaaatcg
gtgagggacacctcagtagaggtgttgtgggatcagctggacattccctttgatgcctgg
gagctctatgtccgtaacacgaaagaggagaatgggaagatcctgacaacccttccatcc
tcccagactatgtatgagcagtcagggcttggtcctggtcaggagtacgaggtctcagtg
ggcgtcatcaagaacaataccagaggacctcagtctactaaaatcattaccaccaggatc
gatggccccagacaggtagaggtgcgtgatgtgacggactgctcaggcttggtcacctgg
ttccagcccgtggcccaggtggacggtgtcaccgtgtcctacggccccagctcccacccc
acagagaggaccagcgtggacctgtccacctcagacaaacagtacagcttcgacagcctc
agcccagacactgagtaccaggtgtccctgatctccaggaggggagacgacaccagtgag
ccagtctctgagatattcaccacagacctggacgcccccaaagacctgaagcccttgggc
cagacagacgacagtgtcacactgaagtggataaacagccgggcagatgttgacagctac
agggtgaagtacagccccatctctgggggttcccatggcgaggaggtgttctcccgtggg
ccaggagacagcactcaggccaccatcactggaatgaaaccaggtacagaatacgggatt
ggtgtgactgccgtgaagaacgagagggagagcctgcctgccactacaaacgcagccact
gatctcgatgggcccaaggacttggaagtgagcgagtccacagagacaagcatgaccctg
gtgtggaggagacccagagccaagatcaccgtctacaggctggtgtacatctccagggac
ggtcgaagggaggaggtggaggtccctggaactgccaccacctatgtcctgaccaacctg
acccccggtatgctgtacaccattaccctggtcgctgagaggggctcaaagaagagcaca
cccgtaaccctgtccgcatctacaggcctgggcgctccaaggggcatccgcttctctgag
gtgaccgagtcctcggccatcgtccactggaccatgcctcgtgccagagtggacagctac
cgcatcgtttatgtgcccctccaaggaggtagcccgatgacagtgcttgcggatgggact
gagacccaggccttgctgcctgacatgttgccaggggtgacctaccaggtgaccatattc
tccatgaagggcctggaggagagtgacccagggacagacaccatcaccacagctctggac
agacctcagggtctttctgctgtcaacgtcactgacacgaccgccctgctgctatggcaa
cccactcgggccactgtcgatggctacatcatcacctacagtgcagattcagggtcccca
gtgatggagcatgtttctgggaacacagtggagtttgagatgggctctctggtccctgcc
acccattacacagttggggtatacgccatgagggaggcactgaagagtggcaccaccacc
accgaattcaccacagatgtggattctcctcgcgacctggtagccagtaacgtccagaca
gacagtgccactctcacttggaagcccccgcgggccgacatcaccggatacatcctcacc
ttcacctcatctgacagcacagtccgggaagtggtcctgaaccctacagccacatcctac
agcatgactcagctgagtggcactaccgactacaacgtcaggctccaggccatcgctgga
gcccagcggagccgccacatcgccaccgtctttaccaccagcggagtgttgtacagatac
cctaaggactgctcacaggctctgctgaatggagacaccacctctggcatctacaccatc
tacctgggaggagaagagagccagcccatccaggtctactgtgacatgaccaccgacgga
ggtggatggatggtgttcctgaggcgccagagtggacagctggagttcttcaggaactgg
aagaactacactggtggctttggggacattaatgctgaattctggttgggtctggccaac
ctccacaagatgacaacagcaggccagtacgagctgcgtgtggacctgagggacaacggg
gagtcggcctatgctcagtatgacaaattcacgatcgcagaaccccgtagccgctacaag
atccacataggagggtacagcggcacagcaggtgactctatgacttatcaccagggccga
cccttctccacgtatgacaatgacaatgacatcgctgtcaccaactgtgccctgtcctat
aagggtgccttctggtacaaaaactgtcatcgtgtcaaccttatggggagatatggtgac
gatagtcacagcaagggtatcaactggttccattggaagggacacgagcattcaataccg
ttcgccgaaatgaagattagaccagtaaacttcagaaactttgaaagtcgaaggaaaaga
tcatag
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