Oncorhynchus masou masou (cherry salmon): 135544667
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Entry
135544667 CDS
T10723
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
Brite
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135544667 (cacna1bb)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
135544667
NCBI-ProteinID:
XP_064828532
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All DBs
Position
8:40927952..41172941
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AA seq
2380 aa
AA seq
DB search
MARFAEDLPTRYGAGGGGRGAPGAGRGGARPGGPPGGQRMYKQSMAQRARTMAIYNPNPV
KQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPANDKT
PMSERLDDTEPYFIGIFCFEGGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGS
DFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVEF
YMGKFHSTCFTIDTGERAAAFPCGTEAPSRMCPNGTECTEYWIGPNYGITNFDNILFAVL
TVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERER
VEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDENAEEKSPLDGAWYKRKQNLP
VLKRGKVKKSKNELIGAEEGDDHFTDMSSVVPPGSPFGRASVKSMKLDSSSYFRRKERRM
RFFIRRMVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMSL
KMYGLGARNYFHSSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKY
TSSKCNLYIASLSSNTFIITRLFYLASFSVCFDSMCFIVLSPRFNFEEETPTTNFDTFPA
AILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDN
LANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPVSAANISIAVFVKQNRDVLSRSSSV
SSVHSPKEQQRTNKMMSVWEQRTNQLRQNNLRASSEALFNELDPEERLRVSSALRLRPDM
KTHNDRPLVVEPGNGDKPRPPKEDRDGADPQQEGGDPYGPQLRKHHRHRERNGENGESRH
HTHHSRSRDHYHPDGPRPKEGKVERSHSREGGQGHRHHHQAGSPEEGVNGGGEEREHRHH
HSHRQPREGNGALANGARVERKGRGHKEGNGEGNGERRRYRSRMVRAQSTLDGEECRENG
KRDGDWDQGHRASLDAQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTV
HIPVTITAPPRETTIIPMNNIDCESLPLNEEKKNLEEDEEELKNGPKHILPYSSMFVFGQ
TNPVRRLCHYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFT
FEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSFMGSQQSVARGTKGKDI
NTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLF
KGKFFYCTDESKSLEKDCRGKFLDYDRDDVAAQDREWRKYEFHYDNVLWAFLTLFTVSTG
EGWPMVLKHSVDATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGD
KAMSECSLEKNERACIDFAINAKPLTRYMPADKQSFQYKMWKFVVSPPFEYSIMTMIALN
TVVLMMKFHGAPELYEAMLKYLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVL
GSITDILVTEIKTDKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLL
IAMLFFIYAIIGMQVFGNIELNEESAINHHNNFQTFFQSLMLLFRSATGEAWHEIMLSCL
SNRPCDKLSGSGGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGP
HHLDEFIRVWAEYDPAACGRMTYLDMHEMLRHMSPPLGVGKKCPPRIAYKRLVKMNMPIA
DDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDADLRKEISRVWPNLPQKTVDLLVTPY
KKLTVGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGAAFFRPMMPMTHMQEET
PITTAKPPPPSQPEPEPQPEPPPVTTSLTNGDTVPSPRSAIKESISGDRLSQEGQLSSSR
TEDVSYSIKPQEAVEMRQAENGADSEGYFGLEGHGRAASMPRLDSQYYRNHPRHLPGTYL
APIPDISPIRRSASTLASQRPQEVSLRDYTLERPSQAQAQSSSAPGQAQDRPYHHHHHHR
CHRRRDKDRDRKQKSLDRASSVQPSSIAGLPAEPAMEGLSRERARERDRGRPQERRHHSA
AGEKQRYYSCERYGGREHYHTKSAGPSRSTSPGETHDLGLFKQSIGMAKGSQVVLTSAFS
TTCRGRRQLPQTPLTPRPAVAYKTANSSPVQFGATGHKSSLSRGLSEHSALLESPAMPVT
HIGSDPNLSPQSRGAPPRSLPEEPDDFQDAVSTHGGGGGRSPRTSASASHGATEPSSAPT
PQGRAGVPNGYHFTLGVNTGSSSSTRGTGSFQEKEEDDWC
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagaagatctacccacccgctatggagctggaggaggaggcagaggt
gcgccgggcgcaggcagagggggcgcccgaccaggtggtcctccaggcggccaaaggatg
tacaagcagtcgatggctcagagagccaggacaatggccatatacaaccctaacccagtc
aaacagaactgcttcactgtcaaccgatccttgttcatctttcgagaggacaatctcatt
aggaaatatgctaagcgaataaccgaatggcctccctttgagtacttaatcctggccacc
atcatcgccaactgcatcgtactggccctggagcagcacctaccagccaacgacaagaca
cctatgtcagaacgcctggatgacacagagccctactttattggaatattctgtttcgag
ggcggcattaagatcatcgccttgggctttgcattccacaaaggctcgtacctccgcaac
ggctggaacgtaatggactttgtggtcgtcctcactgggatcctggctacggtgggctca
gactttgacctgaggactctgcgggcggtgagagtactcagacctctcaaactggtgtct
ggcatccccagtcttcaggtggtattgaagtctatcatgaaggccatggtgcctctgctc
cagataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggagttc
tacatgggcaagttccactccacttgcttcactatcgacactggtgagcgtgcggcagcc
ttcccctgtggcacggaggccccatccaggatgtgtcctaacggtacagagtgtaccgag
tactggatcggccccaactacggcatcaccaactttgacaacatcctgttcgccgtgctc
accgtcttccagtgcatcaccatggagggatgggtggacatcctctacaacgccaatgat
gcctcggggaacacctggaactggctctacttcatccccctcatcatcatcggatccttc
ttcatgctcaacctggtcctgggtgtcttatcaggggagtttgccaaagagagagagcgt
gtggagaagaggcaggactttctgaagctgaggagacagcagcagatagagagagagctg
acggggtacctggagtggatatgcaaggcagaggaggtgctgctggcggaggaggatgag
aacgcggaggagaagtcccctctggacggtgcgtggtacaagaggaaacagaacctccca
gtgttgaagcgaggcaaggtcaagaagagtaagaatgagctgatcggtgctgaggaggga
gacgatcacttcactgacatgtcctctgttgttcccccgggctcaccgtttggccgggcc
agcgtgaagagcatgaagctggacagctcatcctacttccgccgcaaggagaggaggatg
cgtttcttcatccgtcgcatggtcaaagcccagagcttctactggacagtcctttgcctg
gtggggctcaacacactgtgtgtggccatcgttcactatgaccaacccgagtggctcacc
actgccctgtacctggcagagtttgtgttcctgggtctgtttctgtctgagatgagcctg
aagatgtacggcctgggagccaggaactacttccattcctctttcaactgcttcgacttt
ggtgtgataatagggagtatacttgaggtggtgtggtcgatgatcaaaccaggggcatcc
tatggcattagtgtactgagggctcttcgtctgctcaggttgttcaagtttaccaaatac
acttcttctaaatgcaatctgtacattgcaagtctatctagtaatacatttataataact
cgtctcttctacctggcctcgttctctgtgtgctttgactcgatgtgtttcattgttctt
tctccgaggtttaatttcgaagaggagacgccgacgaccaactttgataccttcccggcg
gccattctcaccgtcttccagattctgactggcgaggattggaatgcagtaatgtatcat
ggcattgagtctcaggggggcgtgcggcggggaatgttctcctctgtctacttcatcgtc
ctcacactctttggaaactacactctcctgaacgtcttcttggctatcgccgtcgacaac
ctcgccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaataag
aagctggccctgcagaaggccatggaggtgaaggaggtcagccccgtgtcagcagctaac
atctccatcgctgtttttgtaaagcaaaatcgagatgtactctctcgcagctcgtccgtc
tccagcgtacattcacctaaggagcagcagagaaccaataagatgatgtcagtgtgggag
cagcgcaccaaccagctgcgtcaaaacaacttgagggccagctcagaggctctgttcaac
gagctggacccagaggaacgcctgcgtgtctcctccgccctccgcctgcgccccgatatg
aagacccacaacgaccgccctctagtggtggagccaggcaatggggacaaaccacgaccc
cccaaggaggacagagatggagcagacccccagcaagagggaggagacccctacggccca
caactccgcaagcaccaccgtcaccgggagaggaatggggagaacggggagagcaggcat
cacacccaccacagccgcagtagggaccactaccacccagacgggccccggcccaaagaa
ggaaaggtggagaggagccatagtcgagaggggggccagggccacaggcaccatcaccag
gctggatccccggaagaaggggtgaacggagggggggaggagagggagcaccgccaccac
cactcccacagacagccccgagaggggaacggggccctggctaacggggccagagtggag
aggaagggccggggtcacaaggaggggaacggagaggggaacggagagaggaggagatac
cgctcccgcatggtcagggcccagtcaactctggatggagaggagtgcagagagaatgga
aagagagatggagactgggaccagggacacagagcttcactggacgctcaaggggagagc
ctggccaccagccctgtgcagcctcctgcaggtctgcaggccggagagaagcaagaggat
gcagacaaccagaagaacagccacagagccagccaggcaggcctcaacagcaacactgtc
cacatccctgtcaccatcaccgccccgcccagagagactaccatcatacccatgaataac
atagactgtgagagcctccccctgaacgaggagaagaagaacttagaggaggatgaggag
gagctgaagaacggccccaagcacattctaccctacagctccatgtttgtgttcgggcag
accaaccccgtgcgtcggctgtgccactacgtggtgaacctgcgttactttgagatgtgt
atcctgtcggtcatcaccatgagcagcatagccctggctgctgaagaccctgtgcaggcc
aatgcaccgcgcaataacgtgctcaaatacctggactacgtcttcacgggagtgttcacc
tttgagatggtgattaagatgatagacctgggactactcctccatcctggttcttacttc
cgcgacctgtggaacatcctggactttatcgtggtcagtggagctctggtggcgttcgcc
tgctcgagcttcatgggatcgcaacaaagcgtggccagaggaactaaaggcaaggacatc
aacaccatcaagtccctcagggtgctgcgagtcctgaggcccctgaagaccattaaacga
ctgcccaagctcaaggccgtgtttgactgcgtggtcaactccctgaagaacgtgctcaac
atcctcattgtctacatgctcttcatgttcatctttgctgtgatcgctgtgcagctgttc
aagggcaagttcttctactgcactgacgagtctaaaagtctggagaaggactgcaggggt
aagtttctggactatgaccgtgatgacgtggcggcccaggatcgtgagtggagaaagtac
gaattccattatgataacgtgctgtgggccttcctcaccctcttcaccgtctccaccggg
gagggctggccaatggtcctaaagcattctgtggatgccacctatgaggaccagggcccc
agcccaggcttccgtatggagacctctatcttctatgtggtctactttgtggtctttccc
ttcttcttcgtcaacatctttgtggctctcatcatcatcaccttccaggaacagggagac
aaggccatgtcagagtgtagtctggagaagaacgagagagcttgtatcgactttgccatc
aatgccaagcctttgacgcgctacatgccagctgacaagcagtcgtttcagtataagatg
tggaagtttgtggtgtcgccaccctttgagtactccatcatgaccatgatcgcactcaac
actgtggtgctgatgatgaagtttcacggtgctccggagctgtacgaggccatgctgaag
tacctgaacatcgtgttcacagctctcttcacactggagtgcattctgaagatcatcgct
tttggaccactgaattacctgaaggcagcctggaacgtgtttgactttgtgacagtttta
ggaagtatcacggacatcttggtcacagagattaagacggacaagctgatcaacctgagt
ttcctgaggcttttcagggcggccaggctcatcaagctattgaggcagggctataccatc
cgcatcctgctgtggacctttgtccagtccttcaaggccctaccttacgtctgcctcctc
atcgctatgctcttcttcatctatgccatcatcggcatgcaggtgtttggaaacattgag
ctgaatgaggaatcggccatcaaccaccacaacaacttccagacattctttcagtctctg
atgcttctgttcaggagtgcaacaggcgaggcgtggcatgagatcatgctgtcgtgtctg
agtaaccgtccgtgtgataaactgtcagggtccggagggaaggaatgtggcagtgatttt
gcttacttctactttgtctccttcatcttcctctgctccttcctgatgctcaaccttttt
gtggcggtcatcatggacaactttgagtacctaaccagagatgcctccatcctggggcct
caccacctggacgaatttatccgcgtctgggccgagtacgaccctgcagcctgtggccgt
atgacctaccttgatatgcacgagatgctccgccacatgtcccctccgctgggtgtggga
aagaaatgcccgcccagaatcgcctataagcgattggtcaaaatgaacatgcccatcgcc
gatgacaatacggtgcacttcacgtccacgctgatggctctcatccgcaccgctctggag
atcaaactggcatctggggtgctggctcagcgcctgtgtgatgctgatctgaggaaggag
atctccagagtctggcctaacctgcctcagaagactgttgacctgctggtcacaccatat
aaaaagctgacagtggggaaggtctatgctgccctcatgatctttgactactacaagcag
aaccgggccaagaggctggaacagcaactgggactggacttcacagggacaattaagaat
aaaaagggagcagccttcttccgccccatgatgcccatgacccatatgcaagaggagacg
ccaatcaccactgccaagcccccgcccccctcacaacctgaaccagagcctcagccagag
cccccgcccgtcaccacctctctaaccaatggtgacacagtaccaagccctagaagtgcc
attaaagagtccatatcaggagatcggctgtctcaggagggtcagctgtccagcagtcgg
actgaggacgtgtcctactccatcaaacctcaagaagcagtggagatgaggcaggcggag
aacggtgctgattcagagggctactttggtctggagggccatggcagagcagcctccatg
cctagactggactcccagtactatcggaaccaccctcgccacctacctgggacctacctg
gcacctatccctgacatcagtcctatcaggcggtcggcatccacgttggcttcccagcgc
ccccaggaggtgagtctgagggactacaccctggagaggcctagccaagcccaggcccag
tcatcttcagctccaggccaggcccaagacaggccctaccaccatcaccatcaccaccgc
tgtcacagacgcagggacaaggacagggacaggaagcagaagtcactcgacagggcatcc
agcgtgcagccttctagtatagcaggtttgcctgctgaacctgccatggagggcttgtcc
agggagcgggcgagggagcgtgaccgaggcaggcctcaggagaggaggcatcactctgct
gctggggagaagcagcgctactactcctgtgagcgctacggaggcagggagcactaccac
accaaatcagccggcccgagccgctccacctcccctggagagacccatgacctaggcctc
ttcaagcagagtatcggcatggctaaaggcagccaagtggtcttaacttcagcgttcagc
acgacctgccgtgggcgcagacagctcccccagacccccctcaccccccgccccgccgtg
gcctacaagaccgccaactcctcacctgtgcagtttggtgccacggggcacaagtccagt
ctcagccgtggcctctcggagcatagcgccctgctggagtcacccgccatgcccgtcacc
cacatcggctcagaccccaacctgagcccccagtcgcggggtgcccctccacgcagcctc
cctgaggagcctgatgacttccaggacgctgtgagcacccatggagggggaggtggacgc
tcccccaggacctctgcctcagcttcccatggggctactgagccttcctctgcacctacc
ccacagggccgggctggggtcccaaacgggtaccacttcactctgggggtcaacaccggt
tcgagttccagcaccagaggaactgggagcttccaggagaaggaagaggatgactggtgt
tag
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integrated database retrieval system
