KEGG   Oncorhynchus masou masou (cherry salmon): 135544686
Entry
135544686         CDS       T10723                                 
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:omm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:omm03016]
    135544686
Enzymes [BR:omm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     135544686
Transfer RNA biogenesis [BR:omm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    135544686
 Prokaryotic type
    135544686
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 135544686
NCBI-ProteinID: XP_064828561
LinkDB
Position
8:42359485..42363052
AA seq 421 aa
MQKIRALIASPRVLSIKSNGWLYKCAGIRWIMSEESGNVQNKPLKRVEEGNGESGEHIRK
KLKSDVEQTGDERKHPKRKVVLLLAYSGKGYYGMQRNAGSSQFKTIEDELVTALIKSGCI
PDNHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLWMIEDIKEKLNSNLPPQIRVLGLKRV
TGGFNSKNSCDARTYSYMLPTVAFAPKDYSSENSIAFRLEPETLQRVNCLFGRYKGTHNF
HNFTSQKAARDPSARRYITEMTCGEPFVRGGAEFAEITVRGQSFMMHQIRKMIGLVIAVV
KGYSGDEVLKRSWGEEKVDVPKAPGLGLVLEKVHFDMYNKRFGGDGLHECLEWTEEEQAI
LAFKEEHIYPSIVETECQEGSMASWMATLPIHDFKATAKGAPDKDRGQDDDDEGNGSDSA
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcagaaaattcgagccttgatagcaagtccacgagtgttgagtatcaaaagcaacggt
tggctttacaagtgtgcagggataaggtggataatgagtgaagagtcagggaatgtgcag
aacaagccactgaaacgagtggaggagggaaatggagagtcgggtgagcacatcagaaag
aagcttaaatctgatgtagaacagactggcgatgagaggaaacaccccaaaagaaaagtg
gtcctgcttttggcttattcgggcaaaggttactacggtatgcagagaaatgctggatct
tcccagttcaaaaccattgaggatgagctggttacagcactgattaagtctggatgcatc
ccagataaccatggagatgatatgaaaaaaatgtcattccaaagatgtgcaagaacggac
aagggtgtttctgcagcaggtcaagtggtctctctaaaactatggatgattgaagacata
aaggaaaagctgaactccaatcttccaccacagatccgagtgttgggtctgaaacgagtg
actgggggcttcaattctaaaaacagctgtgatgcccgcacatactcctacatgctcccc
actgtggccttcgccccaaaagactatagcagtgagaattctattgcattccgcctggag
ccagagacactgcagagagttaattgtctgtttggcagatacaagggcactcataacttt
cacaacttcacctcccagaaggccgcgcgggaccccagcgcccgccgttacatcacagag
atgacctgtggcgagccctttgtgcgcggcggcgctgagtttgctgagattactgtgcgt
ggccagagcttcatgatgcatcagatccggaagatgatcggcctggtgatagctgtggtg
aagggttattctggggacgaggtgttaaaacgaagctggggcgaggagaaggtggatgtg
cccaaggcccctgggctgggcctggtgctggagaaggtgcactttgacatgtataacaag
cgcttcggcggggacggcctccatgagtgcctggagtggactgaagaggagcaggctatc
ttggccttcaaggaggaacacatctaccccagcatcgtggagacggagtgccaggaaggg
tccatggccagctggatggccacactgcccatacacgactttaaggccactgcaaaaggg
gctccggataaggacagggggcaggatgatgatgatgaaggtaatggttcagattctgca
ctttga

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