Oncorhynchus masou masou (cherry salmon): 135544949
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Entry
135544949 CDS
T10723
Symbol
abca2
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
omm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135544949 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
135544949 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135544949 (abca2)
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135544949 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
Motif
Other DBs
NCBI-GeneID:
135544949
NCBI-ProteinID:
XP_064828713
LinkDB
All DBs
Position
1:complement(43956911..44036572)
Genome browser
AA seq
2535 aa
AA seq
DB search
MGFLHQLQLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEAFYSAAP
LTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERIREVVLQNHLFTADRPGLGQEL
ESLQQHLESLSTSAGTYPLDNNFNTSQGFTVASVLKNQSVFHQFLVRNLSLPNDTASLLL
STPVNLKEVFNLIFGLYPRTGGGSSHSSGGEKETTHTPAEKILQLEEKMLGVMQSLDGGL
IHKALRDPTKAAHRQALLKLMSQALGLAGGGAGQRYDPQGLKEVEGVLLTGAMLEMLTCG
EDGTSELSKILLVPEKQQSLLQAYRSAACGGGAGQRTERFGEMSQELREQIDTQSLIDKL
RLEQANSSAPLSQSHLGALLKDLADVEKLLRDVDLLSGLARLLPKGACAGHVPPGAPANT
TTSWSLNATTWGPNTTENPWEEGGEEGRGREKENVKEENPHSFSTFVQLWAGLQPILCGN
NRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVDKVIQKANETF
AFVGNVTHYARVWLNISAQLRTYLEEGKLHHHLAWMQQLTSDLRGHPELLNGTDSDLLRG
LLEGNYTLPNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAYHD
NISVFASVIFQTNLDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYGF
VWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSV
AMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLLH
SDIFIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVAH
DKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDDFNLGLSMMML
IIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWECPWGGGARLSVME
EDQACAMEHRRSEEMRGIEEEPSHLPLVVCIDKLTKVYKMGNKLALNKLSLNLHENQVVS
FLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQHNVLFDKLSV
EEHLWFYSKLKGMAEEDIRKEMDKMIDDLELNNKRHSLVQTLSGGMKRKLSVAIAFVGGS
RAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLKC
CGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPQPPSTVSPSSSSSSLSPCSETRVTQFI
RQFVGSCLLLSDSNTELSYVLPSEAVRPRRQARLFQALEQNLAILALTSFGVMDTTLEEV
FLKVSEEDQSLENSDADMKDSLGGISVGKPAAAVGVGGSGKPEVVITGASAGSSSSVERP
EVELSNLVMCSRLSQSQSSLRSSSSLGSVLGDEEGLHADFYGDYCRLFDNGRDPHSTSLR
EDVEEASPEPVVLEGQGSFKLEGWWLKLRQFHGLIVKRFHCAKRNTKGLFSQILLPAFFV
CVAMTVALSVPSIGDLPPLILSPSQYHNYTQPRGNFIPYANEDRPQYRSKLSPDASPQKI
ANTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMCLDSFTQGVPL
SNFVPPPPSPAPSDDPDTHFEDGLWNFTATTPTTVREMVTSPPTLPLFIRELVRCICSMQ
GTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRXQTHWGRAQGQK
GRXMPASFGKKTPPMVRKIAVRRSAQVLFNNKGYHSMPTYLNVLNNAILRANLPPGKGNP
AAYGITLTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAK
HLQFVSGCDPVIYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTSPTNFPAVLSLFLLY
GWSITPIMYPASFCFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLKLVNSYLK
SCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKIKSPFEWDIVTRGLVAMTIEGFVG
FFITILCQYNFLRKPLRVPVSSQLIEDDDVDVACERRRVLRGDADNDMLKIDNLTKVYKS
RKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIGGNSILRE
LLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEQRVVSWALEKLELSKYADK
PAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLT
SHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTRTSSNVKEVVRFFNR
NFPEAVLKERHHTKVQFQLKSDRISLAQVFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFA
KKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRPANTELSALVSEEPEELESDDDEGLISF
EEERVELSFNTDTVC
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacagcttctgttgtggaagaatgtgtctttgaagaggaga
ggaccgtgggtgttggcctttgagatcttcatccctctggtcctcttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccccgtcaaggaagccttctacagcgcagctccc
ctcacctcagcaggcatcattcccatcatgcagtctctgtgtcccgatggccagagggac
gagtttggcttcctacagtacaagaactccactgtcacccagttgttggagcggatccgt
gaggtggtgttacagaaccacctgttcacagcagacaggccaggactgggccaggagctg
gagtccctacagcaacacctggagagcctcagcacatctgcagggacctacccactggac
aacaatttcaacaccagccaagggttcacagtagccagtgtgttgaagaaccagtcagtg
ttccatcagttcctggtcaggaatctgtccctccccaatgacaccgccagcctgctgctc
tccactcctgtcaacctcaaagaggtattcaacctgatctttggcctgtaccccagaact
ggaggggggagtagtcacagttctggaggggaaaaagagaccacacatacccctgcagag
aagatacttcaactggaggagaagatgctgggagtcatgcaaagtctggatggtggactg
atccacaaagctttacgagacccaaccaaagcagcccatcggcaggccctactcaaactc
atgtcccaggctttaggcctagcaggaggaggggcaggccagagatacgacccccaggga
ctgaaggaggtggagggtgttctcctgactggtgccatgttggaaatgcttacctgtggg
gaggatgggactagtgagctgagcaagatcctattggttcctgagaagcagcagtccctg
ctccaggcctatcgcagcgcagcatgtggtggtggggcgggacaaaggactgagcgcttt
ggagagatgagccaggagctccgagagcagatagacacacagagcctcattgacaagctg
cgtctggagcaagccaactcctcggcccctctgtcccagtcccacctgggtgctctcctg
aaggacttggctgacgtggagaagctcctcagggatgtagacctgctgtcaggcctggct
cgcctgctccccaagggggcctgtgctggccacgtcccccctggggctccagccaacacc
accacatcctggtccctcaacgccaccacttgggggcccaacaccaccgagaatccctgg
gaggagggcggagaggaggggagaggacgagagaaagagaatgtgaaagaagagaaccct
cattcgttttctacctttgtgcagctgtgggcagggctgcagcctattctgtgtgggaac
aacagaatcattgagccagaggctttaaagcaagggaatatgagctctctgggctttacc
agtaaagagcagcgcaatctgggcttactagtgcatctgatgactacaaatcccaagatc
ctctattcccccatcggctcacaggtggacaaagtcattcagaaggccaatgagacattt
gcgtttgtgggaaacgtgactcactacgcccgggtgtggctcaacatctctgcccagctc
aggacttatctggaggagggcaagctgcaccaccacctggcctggatgcagcagttgacc
tctgacctacgtggtcacccggaactgctgaatgggacagacagtgatctgctgcgtggg
ttgctggagggcaactacaccctgcccaacacctccaccttgctggagcagctggacacc
attgacaacgccgcctgtggctggacacacttcatgtccaaagtcagtgtggatatcttc
aagggttttccggatgaggacagcatcgtcaactacacactgaaccaagcttaccatgat
aacatctcagtgtttgccagtgtgatattccagaccaacctagatggctccctgcctcct
catgtcctctataagatcaggcagaactccagcttcacagagaaaaccaacgagatccgc
cgagcctactggcgcccagggcccaacacggggggaaagttctatttcctctacggcttt
gtgtggatccaggatatgatggagagagccatcattaacacgtttgtgggccatgacgtg
gtggagcctggcaactatgttcagatgttcccttacccctgctacacaagagacgacttc
ctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtctactctgta
gccatgatgatccaacacattgtggcggagaaggaacaccggctcaaagaggtgatgaag
atgatgggcctgaacaacgcggtccactgggtggcctggttcatcactgggtttgtccag
ttgtccatctcagtgacagccctgacagccatcctgaagtacggtcgggtgctcctccac
agtgacatcttcatcatctggctcttcctctccatctacgccatcgccaccattatgttc
tgtttcctggtgtcagtgatctactccaaggccaagctggcgtcagcgtgtggtgggata
atctacttcctcagctatgtcccatacatgtacgtggccatcagggaggaggtggcccat
gacaagatcacggccttcgagaagtgtatcgcttctcttatgtcaaccacagcgttcggc
ctgggctctaagtactttgccctgtacgaggtggctggggttggtatccagtggcgcacc
atcaaccagtcacctgtagagggcgatgacttcaaccttggcctgtccatgatgatgctc
atcatcgatgctagtgtgtatggagtactcacctggtacatagaggctgtgcatccaggg
atgtatgggctgcctcggccgtggtacttccccctgcagaagtcctattggctgggcagt
gggcgtgtggagacatgggagtgtccctgggggggaggggccaggctgagtgtcatggag
gaggaccaggcgtgtgccatggaacaccggcgatctgaggagatgcgtggtattgaagag
gagcccagccacctgcctctggtggtttgtatagacaagctgaccaaggtctacaagatg
ggcaataagctggccctcaacaagctgagcctcaacctccacgagaaccaggtggtgtcc
ttcctgggacacaacggagccggcaagaccaccaccatgtctattctgacaggtctgttc
ccgcccacctctggctcagccaccatctacggccatgacatccgtactgacatggagcgt
atcaggcagaacctgggcatgtgcccccagcacaatgtgctctttgacaagctcagcgtg
gaggagcacctgtggttctactccaaactcaaaggcatggccgaggaggacatccgcaag
gagatggacaagatgatagacgatctagagttgaataataagcgtcacagcctggtgcag
actctgtctgggggaatgaagaggaagctgtccgtggccatagcgtttgtgggcggctcc
cgggccgtcatcctggatgagcctacggcgggggtggacccctacgcacgcagagccatc
tgggacctcatcctcaagtacaaacagggtcgcaccatcctgctctccacccaccacatg
gatgaggctgacctgttaggagaccgtatagccatcatctcccatgggaaactcaagtgc
tgcggctccccactctttctcaagagcacctacggagacggctacaaactcaccctggtc
aagaaacagagtgagagcggagaccaggtcacccagccccagcctccctccaccgtgtcc
ccctcctcctcctcctcctccctgtctccctgctcagagacccgggtcacccagttcatt
cgtcagtttgtggggtcctgtctgctgttgtctgactccaacactgaactatcctatgtg
ttgccctctgaggctgtcagacctagaagacaggctagactctttcaggcattggagcaa
aatctggccatcttggctctgaccagcttcggggtgatggacaccactctggaggaggtc
ttcctcaaggtgtcggaggaggaccagtccctggagaacagtgatgccgacatgaaggat
tccctaggcggtatctcagtggggaaacctgctgctgcagtgggtgtggggggctctgga
aagccagaggtagtgattaccggggcctctgcggggagcagcagcagtgtggagaggcca
gaggtagagctctctaacctggtgatgtgctccaggctcagccagagccaatcctccctg
cgctcctcctcctccctggggtccgtgctgggggatgaggaagggctccacgcagacttc
tacggagactactgccgcctctttgacaacggacgggaccctcactctaccagcctgagg
gaggacgtggaggaggcctcccctgagcctgtggtcctggaggggcagggcagcttcaag
ctggagggctggtggctgaagctacgccagttccacggcctcatcgtcaagaggttccac
tgtgccaagaggaacaccaagggcctcttctcacagatcctgctgcccgcattcttcgtc
tgcgtggccatgactgtagcgctctctgtgccttccatcggagatctgccaccactgatc
ctgtccccatcccagtaccacaactacacccagccccgtggaaacttcatcccctacgcc
aacgaagaccgcccacagtacaggagtaaactgtccccggatgccagccctcagaagatc
gccaacacgctgcgtctgccatcgggcgtgggcgccacctgcgtcctcaaaacgcccttc
aacagcaccctggaccagctggcacagacgctcaaccccagcgccaacaacagcaagacc
ttggccgcccgctactttgactccatgtgtctggactccttcacccagggagtgccactg
tccaacttcgtaccccctcccccctcgccagccccctccgatgaccccgacactcacttt
gaggatgggctgtggaacttcactgccaccactcctaccactgtcagggaaatggtgacg
tctcctcccaccctgcccctgttcattcgggagctggttcgttgtatctgctccatgcag
gggacgggcttctcctgccccagcggggtgggggggcggccgccccttatgaaggtggtc
accggggacattctggtagacatcactgggcgcaacgtgtcagagtatctcctctacacc
tctgacagactgcgtctgcacaggtaacagactcactggggtcgggcacagggacagaaa
ggcagatgaatgccagcatcctttgggaaaaagactccgcccatggttcgcaaaatagca
gtccgccgatcagctcaggtgctgttcaataataaagggtaccacagcatgccaacctat
ctcaacgtcctcaacaatgccatcctgcgtgccaacctgcctccaggcaagggcaaccct
gctgcatacggaatcacactgaccaaccaccccatgaaccgtaccagtgcaagcctctct
ctggactacttgctccagggcactgatgtggtgatagctatcttcatcatcgtggccatg
tcctttgtaccagccagctttgtggtctttctggtggcagagaagtcgaccaaggccaag
cacctgcagtttgtgtctggatgtgaccctgtcatctactggctggctaactatatatgg
gacatgttgaactacttggtgcctgccacgtgctgtgtccttatcctgtttgtctttgac
cttcctgcgtacacatccccaaccaacttccctgcggtcctgtctctcttcctcctctat
gggtggtctatcactcctatcatgtacccggcctccttctgtttcgaggtgcccagcaca
gcctatgtgttcctcatcgtcatcaaccttttcataggcatcactgccacagtggccacc
ttcctgctgcagctctttgagcacgacaaggatctgaaactggtgaacagctacctaaag
tcctgttttcttatcttcccaaactacaacctgggtcacggcctgatggaaatggcctac
aacgaatacatcaatgagtactatgctaaaataggtcagtttgacaagatcaagtctcca
tttgagtgggacattgtgactcgagggctggtagccatgacaatcgagggctttgtagga
ttcttcatcaccatcctgtgtcagtacaacttcctcaggaaacccttgagagtaccagtg
agcagccagctcatagaggatgatgatgtggatgtggcctgtgagagacggagagtactg
agaggagatgctgacaacgacatgctgaagattgacaacctcaccaaggtgtacaagtcg
aggaagatgggtcgtatcttggctgttgaccggttgtgtctgggcgtgcgtcctggggag
tgttttggcctcctaggggtgaacggagcagggaagaccaccacctttaagatgctgact
ggtgacgagagcaccacgggaggggaggccttcatagggggaaacagtatcctgagggag
ctgttgagagtgcagcagagcattggttactgccctcagtttgatgccttgtttgaagac
ctgacagccagagagcacctggagctgtacacacgcctccgaggcatcccctggaaggac
gagcagagggtggtctcatgggccctagagaaactggagctctccaagtatgcagacaag
cccgctggcacctacagtgggggaaacaagcgcaagctgtctactgccatcgccctcatc
ggatacccctctctcatcttcctggatgaacctactacagggatggaccctaaggcccgc
agattcctctggaacctcatccttgatatcatcaagacgggacgctctgtggtgctgacg
tcacacagtatggaggaatgtgaggctctgtgcaccagactgggcatcatggtcaacggc
aggttcaaatgcctgggcagcatccagcacctcaagaacaggtttggtgatggttacatg
atcacagtgcggactagaaccagttccaatgtgaaggaggtggtgagattcttcaacagg
aatttccctgaggctgtactaaaggagcgccaccacaccaaagtccagttccagctgaag
tccgacaggatctccctggcccaggtgttcagtaagatggagcaggtggtgggggtgctg
gggatagaggactactctgtcagccagaccacactggacaatgtgttcgtgaactttgcc
aagaagcaaagtgacaacctggagcagcaggagagttccccccctggtggaggccagtca
cccctgcagcgcctgctcaccctgctgaggccccggccggccaacacggagctcagcgcc
ctggtcagcgaagagccggaggaactggagagtgacgacgatgagggcctcatcagcttt
gaagaggagagggtggagctctcctttaacacagatactgtctgttga
DBGET
integrated database retrieval system
