Oncorhynchus masou masou (cherry salmon): 135545188
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Entry
135545188 CDS
T10723
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135545188
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135545188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
135545188
NCBI-ProteinID:
XP_064828891
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All DBs
Position
9:complement(28345564..28352678)
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AA seq
1019 aa
AA seq
DB search
MAPRLVSTRWTPLTGLVGCLLVCNCVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
QQSSRRFRIVSGAKKQYLEVNLENGILFVNEKIDRDELCERSPTCFLHLQVVIENPLELY
RVEVEILDVNDNSPNFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRSYQLSSNEH
FVLNIQTRNDGSKFAELVLETPLDREQQKTQEVVLTSVDGGSPERSGTALITITVLDAND
NVPVFDQSVYRARLVENAPRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKVRELFSVDQ
YTGEIRVRGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDSPPGTVIAVISVMDRDSGENGNVHCQIPSNVPFQLHSSFKNYYTLMTSEFLDREA
FSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIHDMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQA
QDAGFPPLSSNVTVNVFILDQNDNSPVIVSPLPKNGTVATEVVPRSVDAGYLVIKITALD
ADEGQNSRISYQVLQATDPGLFSVALYTGEIRTIRRIVDKDATRQRFVILVKDNGQPPLS
ATVSILLSVVENVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDKDTHSGYSLPPVACCCCGGFQPEPPPEVFKKSNLNLQISTGAKVPTNCMEVNGNGTL
SQAYCYKVCLTPESAKSDFMFLKPCSPSRTSRKNETKGADNFAWSAHNRSASANNNSGAT
TPNELKQPNTDWTLPKNQKSSMKSYNSINMDGTLMRKAMHADPENYMTPMTGQYWTWGTH
MRDYKMSPPATGPPPRCCTPRCTPPPQQQPQPQQPQQPPLPPHLHPHPQPPPDYQHNVYI
PGTPSALCTLRPAATHHRSELDVHNSFSTFGKKRRFILNYEPQTEAAAAVINNDLYNAS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaggctcgtgagcacccggtggacaccgctaaccgggctggtggggtgcctg
ctggtgtgcaattgtgtggtggacctggttctcgcacagattcggtactctatccccgag
gagttggaacacggagcttttgtcggtaatatcgccgaggacctgggcttggatgtagcc
cagcaatcctctcgtcgatttcggattgtatccggggccaaaaaacaatacttagaagtg
aatctggaaaacggtattttgttcgttaacgagaagattgaccgcgatgaactgtgtgaa
cggagtccgacctgcttcttgcacttgcaagtggtgatcgagaatccgttagaactgtac
cgagtggaggtggagattttggatgtgaatgacaactctcccaatttcccatggagcgag
tttaatctggagattacagagtcggcggcgcctgggtctcgattcccgttggaaagtgcg
caggaccaggacgtgggcaccaactcgctccgctcctaccagctgagctccaacgaacac
tttgtgctgaacatccagacgcgtaatgatgggagcaagtttgccgagctagttctggag
accccactggaccgggagcagcagaagacgcaagaggtggtgctcacatccgtggacggg
gggtcgcctgagcgctcgggcacagctctcatcaccatcacggtgctggatgccaacgat
aacgtgcccgttttcgaccagtctgtttaccgggcgcgcctggtagaaaacgcaccgaga
gggacattagtgctgaagctaaatgctactgatttggacgagggtgcgaacggggaggtg
tcctatgcattcagtgggcacgcaccactcaaagtgcgcgagctgttcagcgtagaccag
tacacaggtgagatccgagtgagggggattgtggactatgagaaagcgagtgtgtatgag
ctgtatgtgcaggctaaagacaggggtccctccgcagtggccgtgcacagtaaggtactg
gtggatatcttagatgtgaatgacaacgcgccggaagtcatcctcacctccgtgtccacg
cctgtccaggaggattcgccaccgggaacggtgatagccgttataagcgtcatggaccgg
gactcgggagagaacgggaatgtgcactgccagatccccagcaacgtccccttccagctc
cactcttcttttaagaactactacactctgatgactagcgagtttctcgacagagaagcc
ttctccgagtacaacatcaccctcacggcccgggacctgggctccccgtcgctctccacg
aggaaaaccatcctcgtccaagtgtctgacattaacgacaaccccccgcgcttcgcccag
ccatcatacacagtttatgtgactgagaataacgccccgggcgcatccatttgctcagtc
actgctttcgaccccgattctaatcagaacgcttatctgtcctactcgattctagagggt
cagatccatgacatgcccgtgtccacttacgtctccatcaactcggacaacggaaacatc
tacgcgctgcgctcctttgactacgagcagctaaggaactttcagatacgggtgcaggcg
caggacgccggtttccccccactcagcagcaatgtcacagtaaatgtgttcatattggac
cagaacgacaactctccggtcatcgtgtcccccttgcccaagaacgggactgtagcgaca
gaggtggtcccgaggtcagtggatgcggggtacctcgtcatcaagatcactgcgctagat
gcggacgagggacagaactcccgcatctcctaccaggtgctccaggctacggacccgggg
ctgtttagtgtcgccctctacacaggagaaatcaggacaattcgccggatcgtggataag
gacgctacgaggcagagattcgtcatcctggtcaaggacaacggccagccgcctctctcc
gccaccgtctccatcctcctctccgtggtcgagaacgtgcccgagtccctgtctgatttc
ggcgacctcactctgagcccgcagcccccctccaacctcgccctctacttgatcgtgtca
ctgagcaccatctcgctaatcttcctggtggctattattgtgctggctgcggtcaaatgt
tacaaggacaaagacacacacagcgggtacagcctccctcccgtcgcctgctgctgctgc
gggggcttccagccagagccaccccccgaggtattcaaaaaatctaacctgaacctgcaa
atctccaccggggctaaagtgcctaccaactgcatggaggtaaatggcaacggtactctg
tcccaagcctactgctataaagtgtgtctgacccccgagtcagctaagagtgactttatg
ttcctgaagccgtgcagccccagcaggacctcgaggaaaaacgagacgaagggggctgac
aactttgcttggagcgcgcacaaccggagcgcatccgcgaataacaattccggagccacc
actccgaatgagctcaaacaaccaaacaccgactggaccctcccaaaaaaccagaagtcc
tctatgaaaagctataactctatcaacatggatggcactctgatgaggaaggccatgcat
gcagacccagagaactacatgacacccatgacgggccagtactggacctggggcacccac
atgagggactacaagatgtctcctcctgccactggccctcctcctcgctgctgcacccct
cggtgcacccctccaccccagcaacagccccaaccccagcagcctcagcaacctccactc
ccccctcatctccatcctcacccccagccacctccagactaccaacacaacgtgtacatc
cctggcacgccgtcggctctgtgcaccctgaggccagcagccacccaccaccgcagtgag
ctggacgtccacaactccttctccaccttcggcaagaagaggcgcttcatcctcaactac
gagccccagacagaagcagcagcagccgtcatcaacaacgacctgtataacgcttcatag
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