Oncorhynchus masou masou (cherry salmon): 135545239
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Entry
135545239 CDS
T10723
Name
(RefSeq) neuronal PAS domain-containing protein 1-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135545239
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135545239
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
135545239
NCBI-ProteinID:
XP_064828938
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All DBs
Position
9:49245996..49282862
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AA seq
781 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWCPLLEGENHCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSSEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHVAPESASSSASTSSLAGTPEPAPTSPLSPGNEPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPAMVPGSARSVRRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYHFIHVEDLDNIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWVQSCATVSINHKAPHERNVIWVNYVISRTELPDTPL
DLLQLPESLRAERLKASSSPSEHSPQTRGPQPMKNPVCKGDPDSKLREIYNPGVQSGDRR
KRPLRSDSEGAPAETRRRLEEFRQRERSVSASSDLGSESGGEEREWEHGGDSASVKREEG
PTKRGEETPMRGERGGGGHNGRAVIRHLKSVVSSPLSGRPNIKTEHEALIAGGRWTHTHT
SSHIQPLPSHTHTPCGSLNGDSPLTPIPDSSSSSEAPPNGIFTPPSPSMSPPMPGSSPLP
CEERGMLSGGRGGGPDFELLHRLAAGGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPEL
PHSHLGAEGLRSDHHKGPPAFFPHLQRLAGLPSFSGFSASDNPFNPFCVNGLRGAAGSEE
D
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgccgttcgtcagcgagggaaagtgtgtgagcgtggagtgggacttccta
cagggactactggccaaaccccccaccctgccctgtttgcagaacctgcggaaggagaag
tctcgtaatgccgctcgttcccgtcgcggcaaggagaactttgagttctttgagctggcc
aagatgctccctctccccggggccatcaccagccagctggacaaggcctcggtcatccgc
ctcaccatcagctacttgcacatgcgcaccttcgccagccagggagacccgccctggtgc
cccctgctggagggagagaaccactgcagcaaagtgcgacgctcctcccactctctggcc
actgacatgttcgaacagcacctaggagcacacttgttacagtccctggacggctttgtg
tttgtggtaagctcagagggacgcttcctctacatatcagagactgtttccatctacctg
ggcctctcacaggtggagttgacgggcagcagtgtgtttgactacatccacccagcggac
catgtggagatggcagagcgtctgggcatcaggccccacctgagggccgaggctggctgc
cacgtggcccccgagagcgcttccagctctgcctccacatcctccctggccgggaccccc
gagcctgcccccacaagccccctctctcctgggaatgaacctcctgaccgaggcttcttc
atccgtatgaagtccaccctcaccaagagaggcctccacgtcaagtcctcgggctacaag
gtgatccatgtgaccgggcgaatccgctgtcgccctgccatggtgccaggctccgcccgc
tcggtgcgtcggccaatgggcttggtggcccttgcgcacacgctcccgccctccacgctg
aacgaggtgcgcatggagagccagatgtttgtcttccgggtcaacatggatttgcaggtc
acctactgcgagaacaggatctcagagtacatggacctgagcccggcagaggtggtggga
cacacctgctaccacttcatccacgtggaagacctggataacatcagacagagccatgag
gacttgttgaggaagggtcaggtggtgaccgggtactaccgttggctccagaggagaggg
ggttatctgtgggtccagtcctgtgccaccgtctccatcaaccacaaagccccccacgaa
cgcaacgtcatctgggtcaactacgtcatcagtcggacagagctcccagacactcccctg
gatctgctgcagctcccagagagtctgagggcggagcgtctgaaagccagctcctcccct
tcggaacactcaccacaaacccggggcccacagccaatgaaaaaccctgtgtgtaaaggt
gaccctgactcgaaactgagagagatctataatcccggtgtccaatcaggggacaggagg
aaacgtccgctgcggtctgactctgagggtgctcccgcggaaacgcggcgtcgcctggaa
gagttccgccagagagagcggagtgtgtcagcctcctcagacctgggcagtgagagcggg
ggagaggagagagagtgggagcatgggggagacagcgcgagtgtcaaacgagaggagggg
cctacgaaacgaggcgaggagacacccatgaggggcgaaaggggcggcggggggcacaac
ggccgtgcggtaatccggcacctgaagagtgtagtgtcctcgcctctctctggccgcccc
aacatcaagactgaacatgaggcactgatcgcagggggtcgctggacacacacacacacc
tcctcacacatacaaccgctaccctcacacacacacacaccctgcggcagcctgaacggc
gacagtcccctcacccctatcccggactcctcctccagcagtgaagccccacccaatggt
attttcaccccgccctccccctccatgtcccctccgatgcccggctcctcccctctaccc
tgtgaggagcggggaatgttgtctggaggcagggggggcgggccggacttcgagctgttg
catagactggcagcggggggtgctgcaggacgggtgttgtttcaccccctggccctcggc
ccccaggggccacagagcctgtacgcccccagtaccatccgctatgcgcccccagagctg
ccccactcccacctcggtgctgaggggctgcgctccgaccaccacaagggccccccagcc
ttcttcccccacctccagaggctggccggcctgccctccttcagtgggttctccgcctcg
gacaatcccttcaaccccttctgtgtgaacggactgaggggggccgcggggtccgaggag
gactga
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