Oncorhynchus masou masou (cherry salmon): 135545458
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Entry
135545458 CDS
T10723
Name
(RefSeq) synaptopodin-like
KO
K21112
synaptopodin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135545458
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
135545458
NCBI-ProteinID:
XP_064829157
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Position
9:6851341..6935049
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AA seq
1116 aa
AA seq
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METERGHMSVRRGVSWSPGGGRKPLQRVHGGNTDTGKRESDASSERRDYKAIKGQVTSTS
TIQLTRKTNLTRSASLSEKELKEARVRSQIIAAQLTVPSGCSNSRGVQLFNRRKQRVDAF
TLESCGERTRGVERDGDNRNNNLTWEGEREGPSGGTEIDRQLNWKKGSGTKPPSGSEVTG
SDIMEDPGDEHIYEEVDVIQERHFQPVNEREEEEEERSGAREREEIYEDIEGEVKGETIL
VNDNNTGPVREEVGMNRGSYTYPTAPPETRNGFHSTQGSAGEIQNGGRVSMSLSRQTPTI
VNRTARPFFSPPTVQLKSPEARSPVMDNNIPPAPSTPPPAPSYSTPPLPAFTATRPVTFS
PPSRPVTFSPPPPLSSCPMPPRPAFPIHPPPPSQSLSSPPPKSTVMFPRSTPVPQYNTAP
TADPVSQYLPANPLVTQYIPPPTSPRPNTFVPFTPQPIGQQNQQQPIKTGILEKGAAAIR
RSSTARKSMFTFKEKPVMAPNPELLSLVQGNDDRKKHGSVPDSAPEEELLALGAEASNFL
AREEVKAEAANVPEWSSCLKSSRTRKPRGQHQPEQTLTNASGKGAELFAKRQSRMEKYVV
EKQNVSGGGGGQMRSPSPTASLPPSWIYPSNMPGRVKAIANNTDLSARLTRTLQTPQPGN
RRPSQQASTPAPVLAEPSLEYGCTKIEMDLSRHQPYQLNSSLFIVNPVQDSTSTLLSALP
RGAPPPPKPLISSEAFSRQASLPSSNPQSHNYNSLRPTLSPSLQPPSGGIRGGDNYLPQH
GGTPQLRDPRITSPVSAFSPERVASPRSSVQAPRPTFSAKRAGIEPQMRKESPPTPTRTP
QFTRRFSSPEGPPTSRPLHQATATSPASPPWETRCKSPMVVNQTTKPFSTASLSRPKQST
TTSPISSVSPWGSRCQSPNINQTTKPFSTTISNSSSSRPSHQGTITSPLSPSPLSPPWGS
RCQSPIVSPNNSKANHRLLAKNIINAAKRKNSPSPGALSGHNLPISPLGDNTTHQHHQGY
DHQHHYSSSKPPFSPYQPRAMGCQSPPFASPPPTPTGVIRSPVRLYNTRSLTDSDASVES
EDSGLRSPGLQRTHNTCPRGWGGSLRVKRGSVGTDL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagaggggtcatatgtccgtgaggagaggggtaagctggagcccaggtggt
gggaggaagccccttcagagggtgcatggcgggaacacggacaccggcaaaagagagagt
gacgcatcttcggaaaggcgggactacaaagcgatcaaaggacaggtgacatcaacctcc
accattcagctgactcggaaaaccaacctgactcgtagtgccagcctatcagagaaggag
ttgaaggaggcgagggtgaggtcacagatcatcgcggcccagctgaccgtcccgtctggc
tgctccaactcccgcggagtccagctcttcaaccgccgcaagcagagggtcgacgccttc
acgctagagagctgcggggaaagaacgagaggagtggagagagacggagacaacaggaac
aacaacctgacatgggaaggggagagggagggtcctagtggagggacagagatagacaga
caactgaactggaagaagggcagcgggacaaaaccaccctctggaagtgaggtcacagga
agtgacatcatggaggacccaggtgacgagcacatctacgaggaagtggacgtgatacaa
gagagacacttccagccggtgaacgagagagaagaggaggaggaagagaggagtggagcg
agagaaagagaggagatatacgaggatattgagggtgaagtgaagggtgagactatatta
gtaaatgacaacaacaccggtccagtcagagaggaagtggggatgaatagggggtcatac
acataccccacagctccccctgagacccgtaatggcttccacagcacccagggctctgct
ggagagatccaaaatggcggccgagtttctatgtccctgtccagacagacccccaccatc
gtcaaccggacagccagacccttcttctccccacccaccgtacagcttaagtccccagag
gccaggagtcctgtcatggataacaatatacctccagctccctccactcctcccccagcc
ccctcctactccactccccctctccctgctttcactgccactcgccctgtcaccttctcc
cctccgtctcgccctgtcaccttctcccctcctccacctctttcctcatgccccatgcct
cctcgcccagccttccccatccatcctcctcctccctcccagtctctctccagtcctcct
cccaagtctaccgtcatgttcccgaggtctacacccgtcccccagtacaacactgctcct
acagctgacccagtgtcccagtatctacccgccaaccctcttgtcacccaatacatccct
cctccaacctcccccagacccaacacctttgtccccttcacccctcagcctattggtcaa
cagaaccagcagcagccaatcaaaacgggcattctggagaaaggggcggcggccatcaga
agatcgtcaacagccaggaagtccatgttcacctttaaggagaagcctgtcatggcaccc
aaccctgaactcctctctctggtccaggggaacgacgataggaagaagcacggctccgtt
cccgactcagccccagaggaggagctgctggctctgggggccgaggcctctaacttcctg
gccagggaggaggtgaaggcggaggctgccaacgtgccggagtggtcctcctgtctcaag
agctccagaaccaggaaacccagggggcagcaccagccagagcagaccctgaccaacgca
tcagggaagggggccgagctgttcgctaagcgccagtccaggatggagaagtacgtagtg
gagaaacagaatgtgtccggtggtggaggtggccagatgaggtctccatctcccaccgcg
tctctgccgccatcttggatctatccatctaatatgcctggccgggtcaaagctatcgct
aacaacactgacctcagcgccaggctgacacggaccctccagacccctcagcctgggaac
aggaggcccagccagcaggcttcaaccccagccccggtccttgcagaaccatccctggag
tacggctgcaccaagatagaaatggacctctccaggcaccagccctaccagctcaactct
tccctgttcatcgtcaacccagtccaggactctaccagcaccctgctgagcgctctgccc
cggggggcccctccaccacccaaacccctgatctcatctgaggccttctccaggcaggcc
tccctgccctcctccaaccctcagtcacacaactacaacagcctgcggcctaccctgtcc
ccgtcactccagcccccatcaggaggaattagaggtggggataattatcttccccaacac
ggggggactccacagctgagggaccccaggatcacctctcctgtctctgccttctctccg
gagagagtggcctctcctcggtcgagcgtccaggcacccagacccaccttctctgccaag
agggcagggatcgaaccccagatgaggaaggagtcccctccgacccccaccaggacaccg
cagttcacccgtcggttcagcagcccagagggaccccccacttccaggcccctccaccag
gcgacagccacctcccctgcctccccaccctgggagacgaggtgcaagtcacccatggtg
gtcaaccaaaccaccaaacccttctccacagcctctttatccaggcctaaacaatccact
accacctcacctatatcgtctgtatctccctgggggtcccgctgtcaatcccctaacatc
aaccagacaaccaagcctttctccaccaccatctccaactcttcctcttccagaccctct
caccaaggcaccatcacctctcctctctccccctcacccctatcccctccctggggttcc
agatgccagtctcccatcgtcagccccaacaactccaaggcaaaccatcgcctgttagcc
aagaacatcatcaacgccgccaaacgtaaaaacagcccgtccccaggtgctctgagcggg
cacaacctcccaatctccccactaggtgacaacaccacccaccagcaccaccagggctac
gaccaccagcaccactacagcagctccaaaccccccttcagcccctaccagcccagggcc
atggggtgccagtctccccccttcgccagccctcctcccacccctacaggggtgatccgg
tccccagtaaggctctacaacaccaggtccctcactgactcggatgcttcggtggagtcg
gaggactctgggctgaggtctccaggactgcagcgtacccacaacacctgtccccggggc
tggggcggcagcctgagggtgaagaggggtagtgttggcaccgacctatag
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