Oncorhynchus masou masou (cherry salmon): 135545622
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Entry
135545622 CDS
T10723
Symbol
cnot7
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135545622 (cnot7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135545622 (cnot7)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135545622 (cnot7)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135545622 (cnot7)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
135545622
NCBI-ProteinID:
XP_064829440
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All DBs
Position
9:complement(18345089..18357236)
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AA seq
286 aa
AA seq
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MPAATVDHSQRICEVWADNLDEELKRIRQVIRKYNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEEEGIETLYLAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSNLPEEEVD
FFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSAYVQNGTGNAYEEEANKQLS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggctactgtggatcatagccaaagaatatgtgaggtttgggctgacaacctg
gatgaagaactcaaaaggatccgccaggtcattagaaaatacaactacattgccatggac
acagagtttccaggtgtagttgcgagaccgattggagagttcagaagcaatgctgactac
cagtaccagttactgcgatgtaatgtagacttgctaaagattatccagctgggccttacc
tttatgaatgaacagggtgaatatccaccgggaacttcaacatggcagttcaattttaag
tttaacctcacggaggacatgtatgcacaggactccatcgagctcttgacaacatcaggc
atccagttcaagaagcacgaggaggaggggatcgagacattgtacttggctgaactgctc
atgacctcaggggtggtgctctgtgagggcgtcaagtggctttctttccacagtggctat
gactttggctatctgatcaagattctgtccaactctaacctgcccgaagaggaagtggac
ttctttgagatccttcgcctgttcttccccatcatatatgatgtcaagtacctcatgaag
agctgcaaaaacctcaagggtgggctacaggaagtggcagaacagctggagctggagagg
attggcccccagcaccaagctggctcagactcactactgacaggcatggcattcttcaag
atgagagagatgttctttgaggatcatatcgacgatgcaaagtactgtggtcacttgtac
gggctgggttcaggctctgcatacgtccagaacggcacagggaacgcctacgaggaggaa
gccaataaacagctgtcatga
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